KEGG   Siniperca chuatsi (mandarin fish): 122885588
Entry
122885588         CDS       T08948                                 
Symbol
fn1a
Name
(RefSeq) fibronectin 1a
  KO
K05717  fibronectin 1
Organism
schu  Siniperca chuatsi (mandarin fish)
Pathway
schu04510  Focal adhesion
schu04512  ECM-receptor interaction
schu04810  Regulation of actin cytoskeleton
schu04820  Cytoskeleton in muscle cells
schu05100  Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:schu00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    122885588 (fn1a)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    122885588 (fn1a)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    122885588 (fn1a)
   04810 Regulation of actin cytoskeleton
    122885588 (fn1a)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05100 Bacterial invasion of epithelial cells
    122885588 (fn1a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:schu04131]
    122885588 (fn1a)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:schu04147]
    122885588 (fn1a)
   00536 Glycosaminoglycan binding proteins [BR:schu00536]
    122885588 (fn1a)
   04990 Domain-containing proteins not elsewhere classified [BR:schu04990]
    122885588 (fn1a)
Membrane trafficking [BR:schu04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   ER-Golgi intermediate compartment (ERGIC) proteins
    122885588 (fn1a)
Exosome [BR:schu04147]
 Exosomal proteins
  Exosomal proteins of bladder cancer cells
   122885588 (fn1a)
Glycosaminoglycan binding proteins [BR:schu00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   122885588 (fn1a)
Domain-containing proteins not elsewhere classified [BR:schu04990]
 Fibronectin (FN) domain-containing proteins
  Fibronectin type I domain-containing proteins
   122885588 (fn1a)
SSDB
Motif
Pfam: fn3 fn1 Pur_ac_phosph_N Ig_DSCAM-DSCAML_C fn2 Fn3_Dep-1_2nd NDNF Interfer-bind Fn3_Dep-1_4th Fn3_Dep-1_5th FN3_Tor_3rd
Other DBs
NCBI-GeneID: 122885588
NCBI-ProteinID: XP_044072797
LinkDB
Position
LG12:7981291..8015778
AA seq 2504 aa
MSGSTLARVLVALCIGSAVNCIPKGTHRGRRQALPHHVSSASQDGCRENGHFYGINDQWE
RPYLGSTLVCTCLGVADIKCKSKPQEERCYDKNNQQYYTVGETYERPKDGMIWDCTCIGS
GRAKISCTIANRCHEGGASYKIGDTWRRPHETGGYMLECVCLGNGKGEWTCKPIAERCYD
NTVGASYVVGETWEKPYQGWMVVDCTCLGEGSGRITCTSRNRCNDQDTLISYRIGDTWTK
TNAQGHSLQCLCTGNGRGEWKCERHASLHTTGLGTGSRVITNIQPAVYQPATVPELPQEG
LCRTDAGLAYFIGQRWIKNQGSKQMICTCLGNGVSCEEWDGPAPVYGGNSGGQPCVFPFV
YKGKTYHSCTSDGRSDGQLWCSTSSDFETDEKYSFCTEKNVMVATRGGNSNGALCQFPFL
YNGRNYTDCTAEGRRDGMKWCGTTTDYDAEQRFGFCPMAAHEEVCTTSEGVMYRVGDQWD
KRHDVLGHMMRCTCVGNGRGEWSCVAYSQLKDQCIVGGLTYEVNQTFTKLHDEGYTMNCT
CFGQGRGRWKCDAIDQCQEPETRAFYQIGESWDKVIHGINYKCYCYGNGVGELSCEPQQP
YAGGNRPVQVIITESGNQPNSHPIQWNAPQSAHITQYILKWKVKNTQNPWREVMIPGHLN
SYTISGLKPGITYEGQLISMLRFGRREITRFDFTTTYGSLATSQGETTQPPPVVDISESV
TEITSSSFVISWVSASDTVSGFRVEYELSEQGQATGQPMVLDLPRTTTSVNINELLPGRK
YTVNVYEVTDDGEDNLILTTSQTTAPDAPTEHEVEDVGETSIVISWEKPLAPITGYRVVY
TPSVEGESTELTLPDTATSVTLSDLRPGKLYNISIYAVEDSLESEPIFVQVNTAGDPLPD
EVASPTDLQFFEVSDKKIVLTWSSPASDVSGYRVTVVPVDESGSPQREMTLPVSQNSYIE
VSHLQPGTLYRFNIYTIHNGEESLPLIGEQTTKPDAPTDIHFANVTEDSAVMLWYAPRAK
ITGYRLFLTVEGSNPKQLRLPARLSQYTLLNLKPDTEYSATLHAEQENTLSEGETAVFTT
NSPMGNAPHFSTDVTDTSIIISWTPVPRIGYKLTVRPSQGGEAPRDVTSYLGSIYVSGLT
PGVEYTYSVQPVINGHEQGTPITRRVVTPLSPPTDLNLESNPGTGDLTVQWNGANTPDIT
GYRVTCTPTNGQQGNSVEEFVEAGQNSCTLENLSPGVEYNISVVTVKDDMESTPISTTIT
PDIPQLTDLSFKDVSDTTISLRWSPLNTTAITGYRITVVAAGESVPIFEDMVLPTTGHYT
VYGLEPGIDYDISVITVTENGESEPTTVTQQTSVPAPTDLGFGQVGPDTMEITWVSPPVP
NTADINSFLIRYHPIDDEDDITETSVGGRSNNVVLRNLLPNTEYLVSVVCVYEQRESSPL
VGTQKTALDSPVGLRFSEIFTNSFTIHWLAPQSKITGYRIRYQMVSGGRAKDERLPPSRN
HFTLTGLTPDTEYLVSIYAVSRTQESLPLIGKQKTISDAPTDLEVLDSSPTSITVRWDAP
PVTVRYYRITHGESGGHSNPKEFTVPGSQSTATINNLKPGTNYTVTVYAVTGRGDSPASS
TPIYVTHKTGVDSPSEMEVMEVKDNSVTVRWSPAQGPIKGYKVTGVPRNGQGQSFTEVVA
PDQTEITFSGLMPTAEYILSVYALGQDGESSPLVVNALTNVDHPKDLTFSDIDSTSLRIT
WDSPEGIVTSYRVLYSSPEEGERELRPAPRGDAESAVIYGLQPGTEYTVKVIALHDDTAS
TPLVGTQATAISSPTNLQFSQVSPTSFSMRWSVPGQENRLNGLTGLTGYRVVVNPKSKSG
PTKEMNLAPDTTQAHISGLMVATTYEVHVYALKNSLTSRPVKGEVTTLENISPPRRVRIS
DVNDSSITLTWRSKTEPISGFLVEATPTFSSPGYVPIQKTISPDSRSYSITGLEPGTNYK
INIYTLKGNGRSAPLTLTATTAKPVVIPPANIRFTSLNPNSISFTWEPSRSPGVTGYYVT
YEEAGGLPREVIPRPHAGESYAIINGLKPGTEYVIKIVALQGALRSTPLVGKARTQPATD
HELFVPELPQLPIPHRPSTDILDVPESFNDKIFNSNHVHLSGTSGHNQPGQQGQHIYTEY
QSLGPNNGLHRPYGGPKEGQRPTLREPLVYIPVAGPDGNRIPLVRVSDGPLPGLAFGFPD
NETELPQEAQTITTISWQPIPHTSEYEVSCNPITHLEERGFQMRLPGSSNSATLIGLTSG
ASYNVIVEAMRGGAKEKVLEEVVTVGNAVPGDIPITTNRDVCYDTFTQTYHEVGSEWERM
SETGFKLWCHCLGLGSGHFRCDSSKWCHDNGNNYHIGEKWDRRAENGHMMSCTCLGNGKG
EFKCEPHESTCYDDGKMYQVGNQWQKEYLGAICTCTCYGGQQGWRCEKCRRPGGHTNVDA
DLLQPVHSDAYDRYRENVLGKLNIQCPIECLRPELLADAHSPSE
NT seq 7515 nt   +upstreamnt  +downstreamnt
atgtccggcagcaccttagccagggtgctggttgcgctctgtatcgggagcgcggtgaac
tgcattcccaaagggacgcacaggggtcggcgacaagcgctgccgcatcacgtctcctca
gcctctcaggatggttgtagagagaatggccacttctatggcattaatgaccagtgggaa
cggccgtatttgggcagcactctggtctgtacctgccttggagtcgctgacatcaagtgt
aaaagcaaacctcaagaggaaaggtgctatgataagaacaaccagcagtactacactgtg
ggagaaacctatgagagacccaaggacggcatgatctgggactgtacctgtatcgggtct
gggagggccaagatcagctgcaccattgccaatcgctgtcatgagggtggggcttcatat
aagataggtgacacctggaggagaccccatgaaacaggaggctacatgttggagtgtgtc
tgtctgggtaacggcaagggagagtggacctgcaaacccatcgctgagcgttgctatgac
aacactgtgggagcatcctacgttgttggggagacatgggagaagccgtaccagggatgg
atggtggtggattgcacatgtctgggagagggaagtggacgcattacatgcacctccaga
aatcgctgtaacgaccaggatactctgatctcctaccgtattggagatacctggaccaag
acaaatgcccaaggccactcgctccagtgtctgtgcacagggaacggccgaggggagtgg
aagtgtgagcgacatgcttcacttcacaccactggcctgggcactggctctcgtgtgatc
actaacatccagcctgcagtctaccagcctgccactgtgcctgagcttccccaggaggga
ctgtgtcggacagatgcaggactggcgtacttcatcggccagcgctggattaagaaccag
ggaagcaaacagatgatctgtacctgtcttggcaatggagtcagctgtgaagagtgggat
ggaccagctccagtgtacggtggcaactccggaggtcagccctgtgtgttcccctttgtc
tacaagggaaagacctaccactcttgtacctctgatggacgcagtgatggacagctctgg
tgttccacctcctctgactttgagacagatgagaaatattctttctgtacagagaagaat
gtaatggtggcaacacgaggcggtaattctaacggtgctctgtgccagttccccttcctc
tataatggccgaaactacactgactgtactgcagagggacgtagagatggcatgaagtgg
tgtggcaccacaacagactatgatgcagaacagcgttttgggttctgtcccatggctgcc
catgaagaagtgtgtacgaccagcgaaggggtgatgtatcgcgtaggagaccagtgggac
aaacggcacgatgttctgggtcacatgatgcgatgtacctgcgtcggcaatgggcgagga
gaatggagttgtgtcgcttactcccagcttaaagaccagtgtattgtgggtggtctgacc
tatgaggtgaaccaaaccttcaccaaactacacgatgaaggctacacgatgaactgcacg
tgctttggacaggggcgtggccgctggaagtgtgatgccattgaccagtgccaggagccg
gagaccagagctttctatcagatcggagagtcttgggataaagtcatccatggaatcaat
tacaagtgctattgctatggcaatggcgttggagagctcagctgcgagccccagcagccc
tacgctggtggtaaccgtcctgtccaggtgatcataacagaatctggaaaccaacccaac
tcccaccctattcagtggaatgccccacagtctgctcacatcacccagtacatcctcaaa
tggaaagtgaaaaacactcaaaacccatggagagaggtgatgatccctggccatcttaac
tcctacaccatctctggtctgaagccaggcatcacctacgagggtcagctaatcagcatg
ttgcggtttggacgcagagagatcacacgctttgacttcaccaccacttatggatcactg
gctacatcacaaggcgagaccacccagcctccgcctgtggtcgacatctcagagtcagtg
accgaaattacctccagcagctttgtcatttcctgggtttctgcctccgacacagtttct
ggtttcagagtagagtatgagctcagtgaacagggacaggctactggacaacccatggtg
ctagacctgccccgtacaactacctcagtgaacattaatgagcttctacctgggaggaag
tacactgttaacgtctatgaggttacagatgatggagaggacaacctcattcttactact
tcacaaaccactgcacctgatgctcctactgagcatgaagtggaggatgtgggagaaact
tccattgtgatcagctgggaaaaaccactggctcccatcaccggctatcgtgtcgtctac
actccatcagtagaaggtgaaagcacggagctgactctccctgacacagcaacatctgtg
actctgagtgaccttcgacctgggaaattgtacaacatcagtatctacgctgtggaggac
agccttgagagtgagcctatctttgtacaggtcaacaccgctggagatccactgccagac
gaagtggcttctcctacagacctgcagttctttgaggtgtcagataaaaaaattgttctg
acctggtccagcccagccagtgacgtctcaggttaccgggtcaccgtcgtccctgttgat
gagtctggttctccgcagagggagatgactctgcctgtcagtcaaaactcctacattgaa
gtgtcacacctgcagccaggaacactgtaccgcttcaacatatacaccattcacaatgga
gaggaaagtttaccacttatcggggagcaaactacaaagcctgatgctcccacagatatc
catttcgccaacgtgactgaggacagtgctgtgatgttgtggtatgcccctcgtgccaaa
atcactggctaccgtctcttcctcactgttgagggctctaaccccaagcaactgcgcctg
cctgcccgcctttctcagtacaccctcctcaacctgaagcctgatacagagtactctgct
acgctacatgcagagcaagagaacacactgagtgaaggagagacagctgtatttaccact
aactcgccaatgggcaacgctcctcatttcagcactgatgtgactgacacctccattata
atctcctggactccagttccccgcattggatacaagttgacagtacgtcccagtcagggt
ggagaagctcccagagacgtgacctcttacttaggaagtatttatgtttctggtctgact
ccgggagtggagtacacctacagcgtccagccagtcataaacggccatgagcaggggacc
ccaatcacacgccgtgttgtcacacctctgtctcctcctactgatctcaacctggagtct
aacccaggcaccggagacctcacagtccaatggaatggggccaatacaccagacatcact
ggctacagagtgacatgcactcctaccaatgggcagcaaggaaacagtgtggaggagttt
gtggaggcagggcagaactcctgcaccctggagaacctcagtccaggagtggagtacaac
atcagtgttgtcactgttaaggatgatatggagagcactcctatatcaactaccattaca
ccagacatcccacagctgacggacctcagcttcaaggacgtgagcgacaccactatcagc
ctccgctggtcaccgctcaacaccacagccatcactggttacaggatcacagtggtggca
gccggcgagagtgtacccatctttgaagacatggttctgccaacaactggtcattatact
gtctacggactggaacctggtatcgactatgacattagtgtgatcactgtgacggagaat
ggagagagcgagcccaccacagtcactcagcagacctctgtaccagcccccactgatttg
ggctttggccaggttgggccagacactatggaaatcacctgggtctctccccctgtccca
aacactgctgacatcaacagcttcctcatccggtatcatcccattgacgatgaagatgac
attacagaaaccagcgtaggaggcaggagtaacaacgtggtgctaaggaacttgctgccc
aacacagagtatctagtgagcgtggtgtgtgtttacgagcagagagagagctcacccctc
gtcggcacccagaaaacagctctggattcaccagttggcctgcgtttctctgagatcttc
accaactcctttaccatccactggctcgctccccagagcaaaatcactgggtaccgtatc
cgttaccagatggtcagtggtgggagggccaaggacgagaggctgcccccttccaggaac
cacttcaccctgacaggactcactccagacacagagtacttggtcagcatctacgcagta
agcaggacgcaagagagcctgccgctcatagggaaacagaaaacaatctctgacgctccc
acagacctggaagttctagactcttcccctaccagcatcactgtccgctgggacgcccca
cctgtcacggtgcgctactacaggatcactcatggagagtccggaggtcacagtaatcct
aaggagttcacagtgcctggctctcagtcgactgccacaatcaataacctgaagcctggt
actaactacactgtcactgtctacgctgtgactggtaggggagacagccctgcatccagc
actccaatctatgtcacacacaagacaggtgtcgactctccctctgaaatggaggtgatg
gaagtgaaggacaacagtgtcacagtgaggtggagccctgcccagggtccaatcaaggga
tacaaggtgactggggtccccagaaatggacaggggcagtctttcactgaggtggtggct
ccagaccagacagagattactttctcgggactgatgcccacagcagagtacattttgagt
gtgtacgctcttggacaagatggagagagctctccattggtggtgaatgctttaacaaat
gtagaccatccaaaggacctgaccttctcagacatcgactccacctcactgcgaatcacc
tgggacagtcctgagggaattgttacatcttaccgggtattgtattcaagtccggaagaa
ggtgagagagagctgcgccctgctcctcgaggagatgctgagtccgctgttatctatggt
ctgcaacctggcactgaatacactgtgaaggtcatcgctctgcatgatgacacagccagc
acaccgctggtcgggacacaagctacagccatctcatcccccaccaacctccagttctcc
caggttagccctacctctttcagtatgcgctggtctgtgccgggtcaggaaaaccgacta
aatggcctaactggcctcacgggctaccgtgtggtggtgaacccaaagagcaagagcggt
cccaccaaggagatgaacttggccccagataccacacaggcacacatctctggacttatg
gttgcaactacctatgaagtccatgtttatgctttgaaaaactctctgaccagcaggcca
gtcaaaggcgaggtcaccactctggagaacatcagcccccctcgtcgtgtacgtatctct
gatgttaacgactcttccatcactctgacctggcgctccaagacagaacccatctctggc
ttcctggttgaagccacacccaccttctcctctccaggctacgtacccattcaaaagacc
atcagtcctgactcacgctcatacagtattacaggactggagccaggcaccaattacaag
atcaacatctatacactgaaagggaatggacgcagtgcacctctcacactcactgcgacc
acagccaaaccagtggtcatcccgcccgccaatatccgcttcacctccctgaaccctaac
agcatctctttcacctgggagccatcacgcagtccaggggttactggatattatgtcacc
tatgaggaggccgggggtttgcctcgagaagttatccccagaccccatgcaggcgagagc
tacgccattatcaatggtctgaaaccaggaacagagtatgtcattaagattgttgccctg
cagggtgctttgagaagcacacctttagtaggcaaagccagaacacaaccagctacagat
catgagctatttgtccccgagctgccacagcttcctattcctcaccgacccagcactgac
atcctggatgttccagagtccttcaatgacaagattttcaactccaaccatgttcacttg
tctggtactagtggccataaccaaccaggtcagcagggccagcacatctatacagagtac
cagagcctaggccctaataacggacttcatcgcccctacggtggacccaaggaaggccag
agaccgactctcagagaacctctggtctatattcctgtagcaggccctgatggaaacaga
atacccttggtcagggtgagcgacggtcctttgccaggtcttgcgtttggtttccctgac
aacgaaacagagttgccccaagaagcacagacaatcacaaccatctcctggcaacccatt
cctcacacttcagagtatgaggtgtcctgtaatcctattacacacctggaggaaaggggt
ttccagatgcgtctccctggcagctccaacagtgccacgctgattggattgacatccgga
gcttcctacaacgtcatagtagaggccatgagaggcggggctaaagagaaggttttggag
gaagtcgtaaccgttggcaatgctgttccaggtgacatccccattaccaccaaccgggac
gtgtgttacgacacattcacacaaacctaccatgaggtgggctcagagtgggagcgcatg
tctgagacaggcttcaagctgtggtgccactgcctggggctgggcagtggccattttagg
tgtgattcatccaagtggtgtcatgacaacggtaacaactaccacatcggcgagaagtgg
gatcgccgtgctgagaatggtcacatgatgagttgcacctgcctgggcaatggcaaagga
gaattcaaatgtgaaccccatgagtcaacatgttatgacgatgggaaaatgtaccaggtg
ggaaaccagtggcagaaggaatacctgggcgccatctgtacctgtacctgctatggagga
caacagggctggcgttgtgagaagtgcagaaggccgggaggacatactaatgtggacgct
gacctccttcaacctgttcattcagatgcctacgaccggtacagagaaaacgttctaggc
aaactgaacatccaatgtccgattgaatgtttgaggccggagctgcttgcggacgctcac
agcccctcagagtag

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