Siniperca chuatsi (mandarin fish): 122885588
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Entry
122885588 CDS
T08948
Symbol
fn1a
Name
(RefSeq) fibronectin 1a
KO
K05717
fibronectin 1
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04510
Focal adhesion
schu04512
ECM-receptor interaction
schu04810
Regulation of actin cytoskeleton
schu04820
Cytoskeleton in muscle cells
schu05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
122885588 (fn1a)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
122885588 (fn1a)
09142 Cell motility
04820 Cytoskeleton in muscle cells
122885588 (fn1a)
04810 Regulation of actin cytoskeleton
122885588 (fn1a)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
122885588 (fn1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
schu04131
]
122885588 (fn1a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
schu04147
]
122885588 (fn1a)
00536 Glycosaminoglycan binding proteins [BR:
schu00536
]
122885588 (fn1a)
04990 Domain-containing proteins not elsewhere classified [BR:
schu04990
]
122885588 (fn1a)
Membrane trafficking [BR:
schu04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
ER-Golgi intermediate compartment (ERGIC) proteins
122885588 (fn1a)
Exosome [BR:
schu04147
]
Exosomal proteins
Exosomal proteins of bladder cancer cells
122885588 (fn1a)
Glycosaminoglycan binding proteins [BR:
schu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
122885588 (fn1a)
Domain-containing proteins not elsewhere classified [BR:
schu04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type I domain-containing proteins
122885588 (fn1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
fn1
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
fn2
Fn3_Dep-1_2nd
NDNF
Interfer-bind
Fn3_Dep-1_4th
Fn3_Dep-1_5th
FN3_Tor_3rd
Motif
Other DBs
NCBI-GeneID:
122885588
NCBI-ProteinID:
XP_044072797
LinkDB
All DBs
Position
LG12:7981291..8015778
Genome browser
AA seq
2504 aa
AA seq
DB search
MSGSTLARVLVALCIGSAVNCIPKGTHRGRRQALPHHVSSASQDGCRENGHFYGINDQWE
RPYLGSTLVCTCLGVADIKCKSKPQEERCYDKNNQQYYTVGETYERPKDGMIWDCTCIGS
GRAKISCTIANRCHEGGASYKIGDTWRRPHETGGYMLECVCLGNGKGEWTCKPIAERCYD
NTVGASYVVGETWEKPYQGWMVVDCTCLGEGSGRITCTSRNRCNDQDTLISYRIGDTWTK
TNAQGHSLQCLCTGNGRGEWKCERHASLHTTGLGTGSRVITNIQPAVYQPATVPELPQEG
LCRTDAGLAYFIGQRWIKNQGSKQMICTCLGNGVSCEEWDGPAPVYGGNSGGQPCVFPFV
YKGKTYHSCTSDGRSDGQLWCSTSSDFETDEKYSFCTEKNVMVATRGGNSNGALCQFPFL
YNGRNYTDCTAEGRRDGMKWCGTTTDYDAEQRFGFCPMAAHEEVCTTSEGVMYRVGDQWD
KRHDVLGHMMRCTCVGNGRGEWSCVAYSQLKDQCIVGGLTYEVNQTFTKLHDEGYTMNCT
CFGQGRGRWKCDAIDQCQEPETRAFYQIGESWDKVIHGINYKCYCYGNGVGELSCEPQQP
YAGGNRPVQVIITESGNQPNSHPIQWNAPQSAHITQYILKWKVKNTQNPWREVMIPGHLN
SYTISGLKPGITYEGQLISMLRFGRREITRFDFTTTYGSLATSQGETTQPPPVVDISESV
TEITSSSFVISWVSASDTVSGFRVEYELSEQGQATGQPMVLDLPRTTTSVNINELLPGRK
YTVNVYEVTDDGEDNLILTTSQTTAPDAPTEHEVEDVGETSIVISWEKPLAPITGYRVVY
TPSVEGESTELTLPDTATSVTLSDLRPGKLYNISIYAVEDSLESEPIFVQVNTAGDPLPD
EVASPTDLQFFEVSDKKIVLTWSSPASDVSGYRVTVVPVDESGSPQREMTLPVSQNSYIE
VSHLQPGTLYRFNIYTIHNGEESLPLIGEQTTKPDAPTDIHFANVTEDSAVMLWYAPRAK
ITGYRLFLTVEGSNPKQLRLPARLSQYTLLNLKPDTEYSATLHAEQENTLSEGETAVFTT
NSPMGNAPHFSTDVTDTSIIISWTPVPRIGYKLTVRPSQGGEAPRDVTSYLGSIYVSGLT
PGVEYTYSVQPVINGHEQGTPITRRVVTPLSPPTDLNLESNPGTGDLTVQWNGANTPDIT
GYRVTCTPTNGQQGNSVEEFVEAGQNSCTLENLSPGVEYNISVVTVKDDMESTPISTTIT
PDIPQLTDLSFKDVSDTTISLRWSPLNTTAITGYRITVVAAGESVPIFEDMVLPTTGHYT
VYGLEPGIDYDISVITVTENGESEPTTVTQQTSVPAPTDLGFGQVGPDTMEITWVSPPVP
NTADINSFLIRYHPIDDEDDITETSVGGRSNNVVLRNLLPNTEYLVSVVCVYEQRESSPL
VGTQKTALDSPVGLRFSEIFTNSFTIHWLAPQSKITGYRIRYQMVSGGRAKDERLPPSRN
HFTLTGLTPDTEYLVSIYAVSRTQESLPLIGKQKTISDAPTDLEVLDSSPTSITVRWDAP
PVTVRYYRITHGESGGHSNPKEFTVPGSQSTATINNLKPGTNYTVTVYAVTGRGDSPASS
TPIYVTHKTGVDSPSEMEVMEVKDNSVTVRWSPAQGPIKGYKVTGVPRNGQGQSFTEVVA
PDQTEITFSGLMPTAEYILSVYALGQDGESSPLVVNALTNVDHPKDLTFSDIDSTSLRIT
WDSPEGIVTSYRVLYSSPEEGERELRPAPRGDAESAVIYGLQPGTEYTVKVIALHDDTAS
TPLVGTQATAISSPTNLQFSQVSPTSFSMRWSVPGQENRLNGLTGLTGYRVVVNPKSKSG
PTKEMNLAPDTTQAHISGLMVATTYEVHVYALKNSLTSRPVKGEVTTLENISPPRRVRIS
DVNDSSITLTWRSKTEPISGFLVEATPTFSSPGYVPIQKTISPDSRSYSITGLEPGTNYK
INIYTLKGNGRSAPLTLTATTAKPVVIPPANIRFTSLNPNSISFTWEPSRSPGVTGYYVT
YEEAGGLPREVIPRPHAGESYAIINGLKPGTEYVIKIVALQGALRSTPLVGKARTQPATD
HELFVPELPQLPIPHRPSTDILDVPESFNDKIFNSNHVHLSGTSGHNQPGQQGQHIYTEY
QSLGPNNGLHRPYGGPKEGQRPTLREPLVYIPVAGPDGNRIPLVRVSDGPLPGLAFGFPD
NETELPQEAQTITTISWQPIPHTSEYEVSCNPITHLEERGFQMRLPGSSNSATLIGLTSG
ASYNVIVEAMRGGAKEKVLEEVVTVGNAVPGDIPITTNRDVCYDTFTQTYHEVGSEWERM
SETGFKLWCHCLGLGSGHFRCDSSKWCHDNGNNYHIGEKWDRRAENGHMMSCTCLGNGKG
EFKCEPHESTCYDDGKMYQVGNQWQKEYLGAICTCTCYGGQQGWRCEKCRRPGGHTNVDA
DLLQPVHSDAYDRYRENVLGKLNIQCPIECLRPELLADAHSPSE
NT seq
7515 nt
NT seq
+upstream
nt +downstream
nt
atgtccggcagcaccttagccagggtgctggttgcgctctgtatcgggagcgcggtgaac
tgcattcccaaagggacgcacaggggtcggcgacaagcgctgccgcatcacgtctcctca
gcctctcaggatggttgtagagagaatggccacttctatggcattaatgaccagtgggaa
cggccgtatttgggcagcactctggtctgtacctgccttggagtcgctgacatcaagtgt
aaaagcaaacctcaagaggaaaggtgctatgataagaacaaccagcagtactacactgtg
ggagaaacctatgagagacccaaggacggcatgatctgggactgtacctgtatcgggtct
gggagggccaagatcagctgcaccattgccaatcgctgtcatgagggtggggcttcatat
aagataggtgacacctggaggagaccccatgaaacaggaggctacatgttggagtgtgtc
tgtctgggtaacggcaagggagagtggacctgcaaacccatcgctgagcgttgctatgac
aacactgtgggagcatcctacgttgttggggagacatgggagaagccgtaccagggatgg
atggtggtggattgcacatgtctgggagagggaagtggacgcattacatgcacctccaga
aatcgctgtaacgaccaggatactctgatctcctaccgtattggagatacctggaccaag
acaaatgcccaaggccactcgctccagtgtctgtgcacagggaacggccgaggggagtgg
aagtgtgagcgacatgcttcacttcacaccactggcctgggcactggctctcgtgtgatc
actaacatccagcctgcagtctaccagcctgccactgtgcctgagcttccccaggaggga
ctgtgtcggacagatgcaggactggcgtacttcatcggccagcgctggattaagaaccag
ggaagcaaacagatgatctgtacctgtcttggcaatggagtcagctgtgaagagtgggat
ggaccagctccagtgtacggtggcaactccggaggtcagccctgtgtgttcccctttgtc
tacaagggaaagacctaccactcttgtacctctgatggacgcagtgatggacagctctgg
tgttccacctcctctgactttgagacagatgagaaatattctttctgtacagagaagaat
gtaatggtggcaacacgaggcggtaattctaacggtgctctgtgccagttccccttcctc
tataatggccgaaactacactgactgtactgcagagggacgtagagatggcatgaagtgg
tgtggcaccacaacagactatgatgcagaacagcgttttgggttctgtcccatggctgcc
catgaagaagtgtgtacgaccagcgaaggggtgatgtatcgcgtaggagaccagtgggac
aaacggcacgatgttctgggtcacatgatgcgatgtacctgcgtcggcaatgggcgagga
gaatggagttgtgtcgcttactcccagcttaaagaccagtgtattgtgggtggtctgacc
tatgaggtgaaccaaaccttcaccaaactacacgatgaaggctacacgatgaactgcacg
tgctttggacaggggcgtggccgctggaagtgtgatgccattgaccagtgccaggagccg
gagaccagagctttctatcagatcggagagtcttgggataaagtcatccatggaatcaat
tacaagtgctattgctatggcaatggcgttggagagctcagctgcgagccccagcagccc
tacgctggtggtaaccgtcctgtccaggtgatcataacagaatctggaaaccaacccaac
tcccaccctattcagtggaatgccccacagtctgctcacatcacccagtacatcctcaaa
tggaaagtgaaaaacactcaaaacccatggagagaggtgatgatccctggccatcttaac
tcctacaccatctctggtctgaagccaggcatcacctacgagggtcagctaatcagcatg
ttgcggtttggacgcagagagatcacacgctttgacttcaccaccacttatggatcactg
gctacatcacaaggcgagaccacccagcctccgcctgtggtcgacatctcagagtcagtg
accgaaattacctccagcagctttgtcatttcctgggtttctgcctccgacacagtttct
ggtttcagagtagagtatgagctcagtgaacagggacaggctactggacaacccatggtg
ctagacctgccccgtacaactacctcagtgaacattaatgagcttctacctgggaggaag
tacactgttaacgtctatgaggttacagatgatggagaggacaacctcattcttactact
tcacaaaccactgcacctgatgctcctactgagcatgaagtggaggatgtgggagaaact
tccattgtgatcagctgggaaaaaccactggctcccatcaccggctatcgtgtcgtctac
actccatcagtagaaggtgaaagcacggagctgactctccctgacacagcaacatctgtg
actctgagtgaccttcgacctgggaaattgtacaacatcagtatctacgctgtggaggac
agccttgagagtgagcctatctttgtacaggtcaacaccgctggagatccactgccagac
gaagtggcttctcctacagacctgcagttctttgaggtgtcagataaaaaaattgttctg
acctggtccagcccagccagtgacgtctcaggttaccgggtcaccgtcgtccctgttgat
gagtctggttctccgcagagggagatgactctgcctgtcagtcaaaactcctacattgaa
gtgtcacacctgcagccaggaacactgtaccgcttcaacatatacaccattcacaatgga
gaggaaagtttaccacttatcggggagcaaactacaaagcctgatgctcccacagatatc
catttcgccaacgtgactgaggacagtgctgtgatgttgtggtatgcccctcgtgccaaa
atcactggctaccgtctcttcctcactgttgagggctctaaccccaagcaactgcgcctg
cctgcccgcctttctcagtacaccctcctcaacctgaagcctgatacagagtactctgct
acgctacatgcagagcaagagaacacactgagtgaaggagagacagctgtatttaccact
aactcgccaatgggcaacgctcctcatttcagcactgatgtgactgacacctccattata
atctcctggactccagttccccgcattggatacaagttgacagtacgtcccagtcagggt
ggagaagctcccagagacgtgacctcttacttaggaagtatttatgtttctggtctgact
ccgggagtggagtacacctacagcgtccagccagtcataaacggccatgagcaggggacc
ccaatcacacgccgtgttgtcacacctctgtctcctcctactgatctcaacctggagtct
aacccaggcaccggagacctcacagtccaatggaatggggccaatacaccagacatcact
ggctacagagtgacatgcactcctaccaatgggcagcaaggaaacagtgtggaggagttt
gtggaggcagggcagaactcctgcaccctggagaacctcagtccaggagtggagtacaac
atcagtgttgtcactgttaaggatgatatggagagcactcctatatcaactaccattaca
ccagacatcccacagctgacggacctcagcttcaaggacgtgagcgacaccactatcagc
ctccgctggtcaccgctcaacaccacagccatcactggttacaggatcacagtggtggca
gccggcgagagtgtacccatctttgaagacatggttctgccaacaactggtcattatact
gtctacggactggaacctggtatcgactatgacattagtgtgatcactgtgacggagaat
ggagagagcgagcccaccacagtcactcagcagacctctgtaccagcccccactgatttg
ggctttggccaggttgggccagacactatggaaatcacctgggtctctccccctgtccca
aacactgctgacatcaacagcttcctcatccggtatcatcccattgacgatgaagatgac
attacagaaaccagcgtaggaggcaggagtaacaacgtggtgctaaggaacttgctgccc
aacacagagtatctagtgagcgtggtgtgtgtttacgagcagagagagagctcacccctc
gtcggcacccagaaaacagctctggattcaccagttggcctgcgtttctctgagatcttc
accaactcctttaccatccactggctcgctccccagagcaaaatcactgggtaccgtatc
cgttaccagatggtcagtggtgggagggccaaggacgagaggctgcccccttccaggaac
cacttcaccctgacaggactcactccagacacagagtacttggtcagcatctacgcagta
agcaggacgcaagagagcctgccgctcatagggaaacagaaaacaatctctgacgctccc
acagacctggaagttctagactcttcccctaccagcatcactgtccgctgggacgcccca
cctgtcacggtgcgctactacaggatcactcatggagagtccggaggtcacagtaatcct
aaggagttcacagtgcctggctctcagtcgactgccacaatcaataacctgaagcctggt
actaactacactgtcactgtctacgctgtgactggtaggggagacagccctgcatccagc
actccaatctatgtcacacacaagacaggtgtcgactctccctctgaaatggaggtgatg
gaagtgaaggacaacagtgtcacagtgaggtggagccctgcccagggtccaatcaaggga
tacaaggtgactggggtccccagaaatggacaggggcagtctttcactgaggtggtggct
ccagaccagacagagattactttctcgggactgatgcccacagcagagtacattttgagt
gtgtacgctcttggacaagatggagagagctctccattggtggtgaatgctttaacaaat
gtagaccatccaaaggacctgaccttctcagacatcgactccacctcactgcgaatcacc
tgggacagtcctgagggaattgttacatcttaccgggtattgtattcaagtccggaagaa
ggtgagagagagctgcgccctgctcctcgaggagatgctgagtccgctgttatctatggt
ctgcaacctggcactgaatacactgtgaaggtcatcgctctgcatgatgacacagccagc
acaccgctggtcgggacacaagctacagccatctcatcccccaccaacctccagttctcc
caggttagccctacctctttcagtatgcgctggtctgtgccgggtcaggaaaaccgacta
aatggcctaactggcctcacgggctaccgtgtggtggtgaacccaaagagcaagagcggt
cccaccaaggagatgaacttggccccagataccacacaggcacacatctctggacttatg
gttgcaactacctatgaagtccatgtttatgctttgaaaaactctctgaccagcaggcca
gtcaaaggcgaggtcaccactctggagaacatcagcccccctcgtcgtgtacgtatctct
gatgttaacgactcttccatcactctgacctggcgctccaagacagaacccatctctggc
ttcctggttgaagccacacccaccttctcctctccaggctacgtacccattcaaaagacc
atcagtcctgactcacgctcatacagtattacaggactggagccaggcaccaattacaag
atcaacatctatacactgaaagggaatggacgcagtgcacctctcacactcactgcgacc
acagccaaaccagtggtcatcccgcccgccaatatccgcttcacctccctgaaccctaac
agcatctctttcacctgggagccatcacgcagtccaggggttactggatattatgtcacc
tatgaggaggccgggggtttgcctcgagaagttatccccagaccccatgcaggcgagagc
tacgccattatcaatggtctgaaaccaggaacagagtatgtcattaagattgttgccctg
cagggtgctttgagaagcacacctttagtaggcaaagccagaacacaaccagctacagat
catgagctatttgtccccgagctgccacagcttcctattcctcaccgacccagcactgac
atcctggatgttccagagtccttcaatgacaagattttcaactccaaccatgttcacttg
tctggtactagtggccataaccaaccaggtcagcagggccagcacatctatacagagtac
cagagcctaggccctaataacggacttcatcgcccctacggtggacccaaggaaggccag
agaccgactctcagagaacctctggtctatattcctgtagcaggccctgatggaaacaga
atacccttggtcagggtgagcgacggtcctttgccaggtcttgcgtttggtttccctgac
aacgaaacagagttgccccaagaagcacagacaatcacaaccatctcctggcaacccatt
cctcacacttcagagtatgaggtgtcctgtaatcctattacacacctggaggaaaggggt
ttccagatgcgtctccctggcagctccaacagtgccacgctgattggattgacatccgga
gcttcctacaacgtcatagtagaggccatgagaggcggggctaaagagaaggttttggag
gaagtcgtaaccgttggcaatgctgttccaggtgacatccccattaccaccaaccgggac
gtgtgttacgacacattcacacaaacctaccatgaggtgggctcagagtgggagcgcatg
tctgagacaggcttcaagctgtggtgccactgcctggggctgggcagtggccattttagg
tgtgattcatccaagtggtgtcatgacaacggtaacaactaccacatcggcgagaagtgg
gatcgccgtgctgagaatggtcacatgatgagttgcacctgcctgggcaatggcaaagga
gaattcaaatgtgaaccccatgagtcaacatgttatgacgatgggaaaatgtaccaggtg
ggaaaccagtggcagaaggaatacctgggcgccatctgtacctgtacctgctatggagga
caacagggctggcgttgtgagaagtgcagaaggccgggaggacatactaatgtggacgct
gacctccttcaacctgttcattcagatgcctacgaccggtacagagaaaacgttctaggc
aaactgaacatccaatgtccgattgaatgtttgaggccggagctgcttgcggacgctcac
agcccctcagagtag
DBGET
integrated database retrieval system