Siniperca chuatsi (mandarin fish): 122885637
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Entry
122885637 CDS
T08948
Symbol
tnfsf13b
Name
(RefSeq) tumor necrosis factor ligand superfamily member 13B isoform X1
KO
K05476
tumor necrosis factor ligand superfamily member 13B
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04060
Cytokine-cytokine receptor interaction
schu04672
Intestinal immune network for IgA production
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
122885637 (tnfsf13b)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
122885637 (tnfsf13b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
schu04052
]
122885637 (tnfsf13b)
04090 CD molecules [BR:
schu04090
]
122885637 (tnfsf13b)
Cytokines and neuropeptides [BR:
schu04052
]
Cytokines
Tumor necrosis fators
122885637 (tnfsf13b)
CD molecules [BR:
schu04090
]
Proteins
122885637 (tnfsf13b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNF
Motif
Other DBs
NCBI-GeneID:
122885637
NCBI-ProteinID:
XP_044072925
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All DBs
Position
LG12:17544535..17547984
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AA seq
260 aa
AA seq
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MAALAGVKPGTGQRAGEGRLSWPVFLLTLAAVTSSSLSALSLYQLVALRAEVEGLKSEVC
RRREEGREVKHGGQTENISSRRSSQEPLHQPGSQHAFTLIRRRRQVSGTETLVSQPCLQL
LANNSRKTFRKEFSSTPHTGIPWQAGLRRGSALEADGDSMLVREEGFYFVYSQVYYMDST
FAMGHVVIRRKRNVVGDEPQYVILFRCIQNMNPVHPYNTCYTGGIVKLEVGDHLELLIPR
STANVSMDGDSTFLGAVKLA
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atggcagctttggccggtgtgaagcctgggaccggacaaagggcaggtgaagggaggctg
tcctggccagttttcctgctgacgctagctgctgtcacctcctcctctctttcagctttg
tccctataccaactggtggctctcagagctgaggtggagggactcaaatcagaggtctgt
cgcaggagagaagagggacgagaggtcaagcatggaggccagactgagaatatcagtagc
aggagaagcagccaggagcctctgcaccaacctgggtctcaacatgctttcaccctgata
aggaggagaagacaggtctctggaacagagacattagtttctcagccttgcctgcagttg
ttggcaaacaatagcaggaaaaccttcaggaaagaattttcctcgacgccgcacacaggt
atcccctggcaggcggggctgaggagaggctctgccctggaggcagatggagacagcatg
ttggtcagagaggagggcttctactttgtatacagtcaggtctactacatggacagcacc
tttgcaatgggtcatgtggtgatccggaggaagaggaatgtggtgggagacgagcctcag
tatgtgatcctgttccgctgcatccagaacatgaaccctgtccacccttacaacacctgc
tacacaggaggaattgtgaagctggaggttggggaccacttggagctgctgatcccccgt
tccacagccaacgtgtccatggatggagactccaccttcctgggtgctgtcaaactggct
taa
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