Siniperca chuatsi (mandarin fish): 122885668
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Entry
122885668 CDS
T08948
Symbol
itga4
Name
(RefSeq) integrin alpha-4
KO
K06483
integrin alpha 4
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04510
Focal adhesion
schu04512
ECM-receptor interaction
schu04514
Cell adhesion molecules
schu04672
Intestinal immune network for IgA production
schu04810
Regulation of actin cytoskeleton
schu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
122885668 (itga4)
04514 Cell adhesion molecules
122885668 (itga4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
122885668 (itga4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
122885668 (itga4)
04810 Regulation of actin cytoskeleton
122885668 (itga4)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
122885668 (itga4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
schu04147
]
122885668 (itga4)
04515 Cell adhesion molecules [BR:
schu04515
]
122885668 (itga4)
04090 CD molecules [BR:
schu04090
]
122885668 (itga4)
Exosome [BR:
schu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
122885668 (itga4)
Exosomal proteins of other cancer cells
122885668 (itga4)
Cell adhesion molecules [BR:
schu04515
]
Integrins
Integrin alpha subunits
122885668 (itga4)
CD molecules [BR:
schu04090
]
Proteins
122885668 (itga4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_1
FG-GAP
Integrin_A_Ig_2
Integrin_A_Ig_3
FG-GAP_3
DUF11
Motif
Other DBs
NCBI-GeneID:
122885668
NCBI-ProteinID:
XP_044072995
LinkDB
All DBs
Position
LG12:21257405..21290497
Genome browser
AA seq
1026 aa
AA seq
DB search
MRPSEGSVCTHCSLILVLVQVLVLVLPVAGYTLDQEHSLEFSGPPSSMFGYSVLLHRHRA
HSWLVVGAPVANSSSSPSVRSPGAVYRCNITAERQLCHHIHADMLSCGKTCEAESDHQWM
GVSLSRQPGDNGGHILACAHRWKNVFYSKKDGQNHKLPNGVCYRYGSDLRHAQPIIPCYR
DHQRKFGEDYGSCQAGISNFLTEDLIIMGAPGTSYWTGSVLVFNTSSGGMSVYLDDDAGA
VSYGSYLGYSVGAGHFLSPATVEVVGGAPQYNQKGKVFIFTVDNTMLRVVSEVSGKELGS
YFGSSVCVVDLNADGLSDLLVGAPMATGITREEGRVHVYINQGQAKLLEAEFQLTGSNAY
AARFGETIADLGDLDDDGYSDVAVGAPQEDDLKGAVYIYNGRKDGISPTPSQRITGSTLG
RDVRMFGQSLSSGIDIDDNGYQDVAVGAFLSDSAVVLRTRPVIQVKASLALPEQIDQRVA
LCREHKTPTVCFNVTVCFSVRSRQFRGAIDLQYNLTSVYKPSFPHRFYFHGNGSSNSTRG
HVRTRHGQLTCSTHVAYQRKDVRDIYTPVQFEASYSHIEAKTHRASSKTFPPLKPILQQS
AGHKNTITNQTWFARSCSLVNCSTNMQLSAQLVLPHQQQYFALGSGQTIMLKTLLQNSGD
DAFLPRLTLRFPKNIHYIKVLQNEDNVVSCDITQEVNSTTAGVDCSVTSLLLSAHAQLNI
SFLLDINQNSTPGDIIIHLNTSSDNYEREEYLHDNSLSLLLPLKYGVNVNIHGFVTPTSF
VFGDEDSTQVACYTERFNYTYKVLNSGPSRSVDTVVHIALPKILTPYKHRLLQVVDWQST
HGVCSISDTTVSVIEDCDVPEASFIKQLVFFFSSTTTRRMFCGRGDEVCERLVCHLGNLE
VGREAIIQLEIRLNPAVLLQAPGRHGIMRLESTAMVSNPREGPHTILINDQPVAQVVVEA
LFTQKPSTTVQVFIIVVSLILGLMILAALIWCLWKAGFFKREIQKKELRRDSWDYVPKNN
KRESTS
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atgcgtccctcagagggcagcgtgtgcacgcactgcagcctgatcctggtcctggttcaa
gtcctggtcctggtccttcctgtggcaggatacactctggatcaggaacacagtctggag
ttcagcggccccccctcctccatgtttggatactcagtcctgcttcatcgccacagagct
cacagctggttggtggttggagccccagtagcgaactcgtcctccagtccgtcggttcga
tctccaggagctgtttaccgctgcaacatcactgctgagcgccagctctgccaccacata
catgctgacatgctgagctgtgggaagacatgtgaagcagagagtgatcaccagtggatg
ggagtcagtctgtccagacaacctggagacaatggaggacacatcctggcatgtgctcac
cgctggaagaacgtcttctactcaaagaaagacggtcagaaccacaagctgcctaacgga
gtctgttatcgctatggcagcgacctgagacacgcccaacccatcatcccctgctacaga
gaccaccagaggaagttcggtgaggattatgggtcatgtcaggccggtatttctaacttc
ctgacagaggatctgatcatcatgggggctccggggacgtcttattggacgggctcagtt
ctggtctttaacacgtccagcggagggatgtcagtgtacctggacgacgatgctggagcc
gtcagctatggaagctacctgggttactctgtcggagccggtcacttcctgagtcctgct
actgtggaggtggtgggtggagctccgcaatacaaccagaagggcaaggtcttcatcttc
acagtagacaataccatgctgcgggtcgtctccgaagtgtccggaaaagagctgggatct
tacttcggctccagtgtgtgtgtggtggatctgaacgctgatggtttgtcagatctgttg
gtcggcgctcccatggcaacaggcatcaccagggaggagggaagagtccatgtgtacatc
aaccaggggcaggcgaagctgttggaggcggagtttcagctgactggcagcaatgcctac
gccgcccgatttggagagaccatcgctgacctgggagacctggacgatgacggttactct
gatgtggcggttggtgccccacaggaagacgacctaaaaggagctgtctacatttacaac
ggcaggaaggacggtatctcaccaactccatctcagaggattactggatccaccctaggt
cgtgacgtcaggatgttcggccagtcgctgagctctggcattgacatcgatgataacggc
taccaggatgtggcggttggcgcgttcctctcggactcggccgtggttctcaggacccgt
cctgtgatacaagtgaaggcgtctctggctctgcctgagcagattgaccagcgggtggcg
ctgtgcagagaacacaagactccgactgtctgctttaatgttactgtctgcttcagtgtc
aggtccagacagttcagaggagcgatagatcttcaatataatttgacctctgtctataaa
ccatccttccctcatcgtttctatttccatggtaacgggtcatccaatagcacaaggggg
catgtgagaacacgacacggccagctcacttgttcaacacacgtggcttaccaaaggaaa
gatgtgagggacatttatactccggtccagtttgaggcgtcctacagtcacatagaagca
aagacccacagagcctcttccaaaaccttccctccattaaaacccattctgcagcagagc
gcaggacacaagaacactatcaccaaccagacttggtttgctcgttcctgttctctggtg
aactgttcgaccaacatgcagctctcagctcaactagtgctgccacatcagcagcagtac
tttgctcttggctctggacagaccatcatgttgaaaaccttgctgcagaactctggagat
gatgcctttctgccgcgactgacgcttcgtttccccaaaaatatccactacattaaagtt
ttgcagaacgaggacaatgtggtcagttgtgatatcacacaagaagtcaacagtacaacg
gcgggtgttgactgtagcgtcaccagcctcctcctctcagcccacgcgcagttgaatatc
agcttcctattggacattaaccagaacagcacacctggtgacatcatcattcacctcaac
accagcagtgataactatgagagggaggagtatctccacgacaactccctcagtctcctt
cttcctctcaaatatggagtcaacgtcaacatccacggttttgtgactcccacctcattt
gtgtttggagatgaagactcgactcaagttgcctgctacactgaaagattcaactacacg
tacaaggtgttaaactctggtcccagcaggtctgtagatactgtggtccacatcgcgcta
ccgaagatcctcacaccttacaaacacagactgctgcaggtggtcgactggcagtcgact
cacggtgtgtgttcgatcagcgacacaactgtttcagtcatcgaggactgtgatgtccct
gaagcttccttcatcaaacagctcgtcttcttcttctcctccaccaccacccgcagaatg
ttttgtggccgtggtgatgaggtgtgtgagcggttggtgtgtcatctcggtaacctggag
gtggggagagaagccattatccaactggagatcagactgaaccctgctgtactactgcaa
gctccgggtcgtcatggtatcatgaggttagagagcacagcaatggtgtcaaatcccaga
gaaggtcctcacaccatcctcatcaacgatcaacctgtcgcacaggtggtggtggaagct
ctttttacccagaaaccctcaacaacagtgcaagtcttcatcatcgtcgtcagtttaatt
ttgggtctgatgatcctggctgctctcatctggtgtctgtggaaggctggtttctttaag
agggagatccagaagaaggagttgaggagagacagctgggactatgttcctaaaaacaac
aaaagagagagcacttcctaa
DBGET
integrated database retrieval system
