Siniperca chuatsi (mandarin fish): 122885673
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Entry
122885673 CDS
T08948
Symbol
hecw2a
Name
(RefSeq) E3 ubiquitin-protein ligase HECW2 isoform X1
KO
K12168
E3 ubiquitin-protein ligase HECW2 [EC:
2.3.2.26
]
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
schu04121
]
122885673 (hecw2a)
Enzymes [BR:
schu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
122885673 (hecw2a)
Ubiquitin system [BR:
schu04121
]
Ubiquitin ligases (E3)
HECT type E3
122885673 (hecw2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
HECW_N
HECW1_helix
WW
C2
RFXA_RFXANK_bdg
Motif
Other DBs
NCBI-GeneID:
122885673
NCBI-ProteinID:
XP_044073034
LinkDB
All DBs
Position
LG12:3867422..3907305
Genome browser
AA seq
1529 aa
AA seq
DB search
MRPSLATAVLPPRTRSHNPPNLPVGGREHLSAPRRRSPHLRHTLSPENLRTLAERGGAAV
DTVSVVSSPIGLPRANSDTDLVTSQSRSSLTASTLEYTLNRGQNLVISWDIKEEVDATDW
IGLYHIDETNPSNVWDCKNRGVNGTQKGQIVWRLEPGPYFMEPETKICFKYYHGVSGALR
ATTPCITVKNPAVLVEGLAEQVGIEHPRKLISFTLTDLRATGLKKGMFFNPDPYLKMSIH
PGKRSVFPIFSHHGQERRSAIIANTTNPVWHGEKYTFVALMTDILYIEVKDKFAKSRPII
KRFLGQLTIPVQRLIEKIPGVQPVSFSLCRRLPTEHVSGQLQFKVELTSTGPDGASPESI
IGMSSLNGAPGTPSDDEDLPHHLPGVISAGPSPTGSQGSQGMWEGGAMAFPEKELPLVGA
EGRFAEPVSLSSHEMLQRSLIEGLDAIEAPKGPGERPLGAASPKLRSSFPTHTRLSAMLH
IDSDEDEERSGANDITPVPLSPLLMNGEPPDVSGPDEEDPFPELQQEPEQLEPSVLEEEP
EGAGGATDDVPPDAEVALEMGAGLDLEDVLEPDVFSEVEEAPFTEALSHNAMPEDEVHEE
GRGPGEDLSSEIDTCSMATAPQTVFSSSDSCPITLTTAVEAEEGAETAIDPGGDVVSGTP
PTNQAVDDEGGGQVVFTEAEGGAPPASEEEEVHGISVRRLSLQAAGGVAEEQAGAGIKPH
EEAGSVDSEQVTTETDGEEGTHVNGHPVRSLPSVRHDIHRYQRVDEPLPPNWEARIDSHG
RIFFVDHVNRTTTWQRPTGPPAPQGLTRSNSIQQMEQLNRRYQSIRRTITNTDRAEEASV
DLLPEPESDLMPHNISEYRRESAVAHSSGRSRLSLLLQSPSAKFLCSPDFFTVLHSNPSA
YRMFTSNTCLKHMISKVRRDAHYFERYQHNRDLVTFLNMFSNKQLELPRGWEMKHDHTGK
PFFVDHNCRSTTFIDPRLPLQSSRSTGLLAHRQHLSRQRSHSAGECFLLSQVVDDSRQIN
PPVMPRPSSTFSGSSRSQYQDVVPVAYNDKIVAFLRQPNIFEILQERQPELARNHSLKEK
VQFIRSEGVSGLARLSSDADLVMLLSLFEEEVMSYVPPLLHPSHCLSSPQSSPGTQRANA
RAPAPYKRDFEAKLRNFYRKLETKGYGQGPGKVKLIIRRDHLLEDAFNQIMCYSRKDLQR
SKLYVSFVGEDGLDYSGPSREFFFLVSRELFNPYYGLFEYSANDTYTVQISPMSAFVDNH
HEWFRFSGRILGLALVHQYLLDAFFTRPFYKGLLRIPCDLSDLEFLDEEFHQSLQWMKDN
DIEDMLDLTFTVNEEVFGQITERELKPGGAGIPVSEKNKKEYIERMVKWRIERGVAQQTE
SLVRGFYEVVDVRLVSVFDARELELVIAGTAEIDLADWRNNTEYRGGYHDNHIVIRWFWA
AVERFNNEQRLRLLQFVTGTSSIPYEGFASLRGSNGPRRFCVEKWGKITSLPRAHTCFNR
LDLPPYPSFSMLYEKLVTAVEETSTFGLE
NT seq
4590 nt
NT seq
+upstream
nt +downstream
nt
atgcgtccttcccttgccacggcagtcctaccgccaaggacccgttcccacaatccaccc
aacctcccagtggggggccgagaacacttgtcagctccacgaagacgcagcccccacctc
cggcacaccctcagcccggagaacctacgaaccctggcggagaggggcggggctgccgtc
gataccgtctctgttgtcagcagtcctatcggccttccgcgggcaaacagtgacacagat
ctggtgacctcccagagccggtcctcactaacggcgtccactctggagtacacgctgaac
cgcggccagaacctcgtcatatcttgggatatcaaggaggaggtggatgctaccgactgg
atcgggctgtaccacattgatgaaaccaatccgtccaatgtgtgggactgtaagaaccga
ggggtgaatggcacccagaagggtcagatcgtttggaggctggagcccgggccctacttt
atggagcccgagaccaagatctgtttcaagtattaccatggagtgagcggagccctgaga
gccacaaccccctgcatcaccgtgaagaatcctgcagtcctggtggagggactggcagag
caggtgggcattgaacatccacgaaaactgatcagctttactttgacagatctgcgtgcc
actggcctgaagaagggcatgtttttcaatccggacccgtacctgaagatgtccatccac
ccggggaagaggagcgtcttccccatcttcagccaccacggacaagaacgacgatcagcc
atcatcgctaacaccaccaaccccgtctggcatggagagaaatacacgtttgtagcacta
atgacagacatcctgtacatcgaagtaaaggacaagtttgcgaaaagtcgaccgatcatc
aagcgcttcctcggtcagctcactatccctgtgcagcggcttattgaaaaaatacctgga
gtccagcctgtgagtttctccctgtgtcggcgcctgcccactgaacatgtaagcggccag
ttgcagtttaaagtggagctcacctcgaccgggcctgatggagcctctcctgagtctatc
attggcatgtcatccttgaatggagctccagggactccatccgatgatgaggacctgccc
catcatcttccgggagtgatctcggcaggcccttctcctactggctcccagggctcccaa
ggcatgtgggaaggcggggccatggccttcccagaaaaggagctgcctcttgttggagcc
gaaggtagatttgcggagcctgtgagcctgtcaagccatgaaatgctccagagatcactc
attgagggcctggatgccattgaggcccccaaaggccctggtgaaagacccctgggcgcg
gcctcgcctaaactgcgctctagcttccccacacacacaaggctcagcgccatgttgcac
atcgattcagacgaggacgaggagaggtctggggccaatgacatcactccggtgccgctg
tcaccactgctgatgaatggagaacctccagatgtcagcggccccgatgaagaggacccg
tttcctgagctccagcaggagcctgagcagctggagccctcagtgctagaggaggagccc
gagggtgcaggtggtgcgacagacgacgtgccccctgatgcagaggtggccctggaaatg
ggggcaggtctggacttggaggatgttttggagccagacgtcttctccgaagtggaggag
gctcctttcacagaggctttgtcccataatgctatgccagaggatgaagtgcatgaggaa
ggaagggggcctggcgaggacctctcctcagagattgacacctgctccatggcaacagct
ccgcagactgtcttctcatcatcggacagctgtccaatcacgttgactactgctgtggaa
gcggaggagggagcggagacggccatagatcctgggggagatgtagtttccggcacccca
ccaaccaatcaagctgtagatgatgaaggtggggggcaagtcgttttcactgaggctgaa
ggaggagctcccccagccagcgaggaagaggaggtccatgggatcagcgtgaggaggctg
agcctgcaagctgccgggggcgtggctgaagaacaggcaggggcggggataaagccacat
gaggaggcgggttctgtagattcagagcaagtcaccacagaaacagatggagaggaaggt
actcacgtcaacggccatcctgtacgttcgcttccttctgtacgtcatgacatccaccga
taccaacgtgtggacgagcctctacctcccaactgggaggctcggatcgacagccatggg
aggatcttcttcgtggaccacgtgaacagaaccaccacatggcagcgtcccaccggacct
cctgccccgcagggcctgacccgctccaactccattcagcagatggagcaactcaaccgc
aggtaccagagcatcaggaggaccataaccaacactgatcgggcagaggaagcctcggtt
gacctgcttcctgaaccagaaagtgacctgatgcctcacaacatttctgaataccgacga
gaaagtgcagtcgctcactccagtggtcgttcgcgtctctccctgctgctccagtcgccc
agcgccaagttcctgtgcagccctgacttcttcaccgtgctgcattctaaccctagtgcc
taccgcatgtttacgagcaacacctgcctgaagcacatgatcagtaaggtgcgtcgggac
gctcattactttgagcgctaccaacacaaccgcgacctcgtcaccttcctcaacatgttc
tccaacaagcagctggagcttccccggggctgggagatgaagcatgatcatactgggaag
cccttctttgtggatcacaactgtcgctccacgaccttcattgacccacggctgcccctc
cagagttctcgctccaccgggctgctggcccaccgccagcacctgagccgccagcgcagc
cacagtgctggggagtgcttccttttgtcacaggtagtggacgactctcgccaaatcaac
ccgcccgtcatgccacgcccatccagcaccttcagcggctccagtcgaagtcagtaccaa
gatgtggtgcctgtggcctacaatgacaagattgtggcgtttctacggcaacccaacatc
tttgagatcctgcaggaaaggcaacccgagcttgccagaaaccactcgctcaaggagaag
gtgcagtttattcgcagtgagggagtcagtgggctggctcgtctctctagcgacgctgac
ctcgtcatgctgctgagtttatttgaggaggaggtgatgtcatatgtaccaccattactc
cacccgagtcactgcctctcctctcctcagagctcccctggcacccagcgagccaatgcc
cgtgctcctgctccctataagcgagattttgaggctaaattgaggaacttctatcgaaag
ctggagaccaagggttatggacagggaccgggaaaagtcaagctcatcatacgcagggac
caccttctggaggacgcctttaaccagatcatgtgttactcccgtaaagacctacagagg
agtaaactttacgtcagctttgtgggcgaagacgggctggactacagtggaccctccaga
gagtttttcttcctggtgtccagagaactgttcaacccgtactacggcctgtttgaatat
tcagccaatgacacgtatactgtccagatcagccccatgtctgcttttgtagacaaccac
catgaatggtttcgcttcagtgggcgtatcctgggcctggctctcgtccatcagtacctg
ctggatgccttctttacccgacccttctacaaggggcttcttcgcatcccatgtgacctg
agtgacctggagttcttggatgaggagttccaccagagcctgcagtggatgaaggacaac
gatattgaagacatgctggatctcaccttcactgtcaatgaggaggtctttggacagatt
acagagagagagctgaagccaggcggggctggtatccctgtgtcagagaagaacaaaaag
gagtacattgagcgaatggtcaagtggcgtatagagagaggagtggcccagcagacggag
agcctggtccgaggcttctatgaggtggtggatgtgcgactggtgtctgtgtttgatgcc
agggagctggagctggtgattgcaggcactgcagagatcgacctggcagactggagaaac
aacacagagtacagaggaggttaccatgacaaccatatagtgattcgttggttctgggca
gctgtggaaaggttcaacaatgagcagaggctgaggctgctgcagtttgtgacaggcacc
tccagtattccctacgagggatttgcctctctacggggcagtaatggaccccgcagattc
tgtgtggagaagtgggggaaaatcacctccttacccagggctcacacttgctttaatcgt
ttggacctcccaccttacccctccttctccatgctctatgagaagctggtcactgctgta
gaggaaacgagcacgttcggtttggagtaa
DBGET
integrated database retrieval system
