Siniperca chuatsi (mandarin fish): 122885735
Help
Entry
122885735 CDS
T08948
Name
(RefSeq) alsin-like isoform X1
KO
K04575
amyotrophic lateral sclerosis 2 protein
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
schu03036
]
122885735
Chromosome and associated proteins [BR:
schu03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
122885735
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_RLD
RCC1
DH_Alsin
RCC1_2
MORN
PH_alsin
VPS9
Alsin_RLD
PH
DH_ALS2
HA_Alsin
SOS1_NGEF_PH
PH_16
RhoGEF
RHG20_PH
Motif
Other DBs
NCBI-GeneID:
122885735
NCBI-ProteinID:
XP_044073199
LinkDB
All DBs
Position
LG12:9776660..9807482
Genome browser
AA seq
1657 aa
AA seq
DB search
MENREESPADERAPTPPERGLLHVWQSAGPSDQLCPERVLLSRPVLQAALGEHHGLLLTQ
GGLVYSFGELLWRDLSIPLSAPVLEVSLLGKTVVRVAAGGFHCGALSEQGNIYMWGENTA
GQCGLTERDTVTSITVSEPCPVTVVDSDVVPPAVVRVIDLALGREHSLALSAQNELWAWG
SGCQLGLVTSTFPVWRPKKVEHLAGRHVIQVACGAYHSLALVRSLPPQNYNTQNPSEKRE
RGQSPHHSVTEREELFAVDTGHYCPLGVELTEVMTGETSPRRRCPRRRLQSGGRSAGGSS
RPFSEDGKSNTKQKNLPVDTKLEPDGHADPLTQTDGSPMSHPLSGWRANENSTFPDEMEI
QKLLQKLSSQSLEMRHTTGLGDTDSLSSYTSDDSCVSSTPSTDLLTSSYKEDLPIKSQTN
NNSGVAVSYSSSPVCLEEVRLGLEAEKHALHSTIITNINQKGKAAANRRCSLPGTPTRGR
NGSPRRWRPCACRPSSAGRTQAAALEEAGDRLPSLETEVWSWGRGSEGQLGHGDQLARLQ
PLCIKSLTGEEVIRVAAGSHHSLAVTAHCQVYSWGSNMCGQLGQINSPVTVPQQAKLSEG
LRVWDVSAGQSHSLLLADGDCVQPVLLYCGQQQEPMSAQSERSHQGQRSCQRSPNRAESY
TVRPTLLPFCMEMGYISSVCSGGQSCALLADQNIMGFISAIHELASRERQFYCWSCNVRK
LLLTPLRNRESVCPSLGKPCTHLFSSLCESFVRLSVLIGRHSTSLSYFLHDVQGRDVTSL
PLLTHTEHFLDIYKEYCSSLGNFQVMDGFQSLHKLSLECLGSQQTMLAQLCVSDQSASGD
VDLVSLLYWPLQQLHQYSRVLLKLAACYDVLTTEYQSLHQGCSQYESLSLSLLRRKKEAE
TTLLFWKTHSGKTTEVLRLPQRRVVCESSNRSLTLQNAGRFSNHWFMLFNDALVHTQGAI
PSQSLFSTHHIYPLTCLWVKPVTEDSSGLYAIKITCPEESFTLVASTPQEKNKWLRSLNQ
AVDHMLGGGGQGSSPGMTAMSRTASYTFTGEGRFKDAQYTGGWMAGRVHGRGTMKWPDGR
TYSGNFKNGLEDGYGDCIIPNKVLNKPDSYQGHWRDGKIHGFGKYKYASGEVYEGCFCDG
QRHGYGMLSSGKLDKTSSSVFLGQWIHDRKTGYGVYDDITRGEKYMGLWLDEQRHGNAVV
VTQYGVYYEGTFRDNKMIGPGLMVSDDDTAFHGEFSDDWNANGKGVLSLANGDCLEGLFS
GEWTAGLKVVGTYTKPAIDDPENKERNLLLRLGQYVVPAGQRWVCVFDECWSRLGCDAAG
RGERTAAWENIAVTITSARRQSPDLSRSQSKVLECLEFIPQHGEPVTTANYDNIRRYLIK
ACETPLHPLGWLVETLVTVYRMTYVGVGSNRRLLRQAVQELLAYLTHFYNIVRFLFPGLP
NDGGIIPDPPAPPSKRRHNSNIAEQGSIVVVSCSSLLLPLLLPRLYPPLFTLYCLQEEHE
EAQYWERVLQLNKQPDQSLLRFLGVQEKFWPVCMSILGEKKQIVSSSKDACFISAVETLQ
QISTTFTPSDKLLVIQKTFEELTQEVKPMLDGNFLWCMDDLLPLFLYVVLRARIRNLGAE
VSLIEDLMDPNVQHGELGLMFTTLKACYIQIQQESTT
NT seq
4974 nt
NT seq
+upstream
nt +downstream
nt
atggagaacagagaggagagccctgcagatgagcgggcccccacacctccagagcgagga
ctcctccacgtctggcagtcagcgggccccagtgatcagctctgtccagagagagtgctg
ctgtccagacctgtcctgcaggccgctctgggagaacaccatggactcctgctgacacag
ggtggtctggtgtattcattcggtgagctgttgtggagggatctgagcatcccgctgtct
gctccggtgctggaggtctctctgctggggaagacggtggtccgtgtggctgccggcggc
tttcactgcggagcgctgagcgagcagggcaacatctacatgtggggggagaacactgca
ggacagtgtgggctgactgagagggacacagtcacaagcatcacagtttcagagccgtgc
cctgtgactgtggtggacagtgacgttgttcctccagcagtggttcgggtcatagatctg
gccttaggacgggagcacagcctggctctgtcggcccagaacgagctgtgggcatggggc
agcggctgccaacttggcctggtcaccagcaccttccctgtatggagaccaaagaaggtg
gagcacttggcaggcagacatgtaattcaggtggcttgtggtgcctaccacagcctggcc
ttggttcgcagtttacctccacagaactacaatactcagaatccttctgagaaaagggag
cgaggccagtcacctcaccactcagtgacagagagggaggagctgtttgcagttgatact
ggtcactactgtccgctgggggtagagctgactgaagtcatgacaggcgagacctctccc
agaagaagatgcccaagacgaaggctccaatctgggggaaggtcagctggcggcagttca
cgtccattttctgaagatggcaaatctaacactaagcagaagaatcttccagttgacacc
aagcttgagcccgatgggcacgctgaccctctcactcagacagacggcagccccatgtcc
cacccactatcaggctggagagccaatgagaattccactttccctgacgaaatggagatt
cagaaactcctccagaaactctctagtcaatcactggagatgcgccacaccaccgggcta
ggagataccgactcactgagcagctacacttcagatgacagctgtgtttcctcaactcct
tccacggatctgttgacttccagttacaaagaagacttgccaattaagagtcaaaccaac
aataacagtggagtggccgtgtcatactcctcttccccagtgtgtttggaagaagttcgg
ctcggtcttgaggcggagaagcatgcactgcactccactattataacaaatataaaccag
aaggggaaagcagcagcaaacaggagatgctccctgcctggaacacccacccgtggtagg
aatgggtctccacggcgatggcggccttgtgcctgcaggccatcctctgctggtcggacc
caggctgcagcactggaggaggctggagacaggctgccgtctctggagacagaagtgtgg
agctggggccgagggtctgaagggcaactgggccatggggatcagctcgccagactccag
cctctgtgtatcaagtctttgacaggggaggaggtgatcagagttgctgcagggtcacac
cattcactggctgtcaccgctcactgccaggtgtactcatggggtagcaatatgtgtgga
cagctcggtcaaatcaacagtcctgtcactgtacctcaacaggcgaagttgtctgagggt
ctgagggtttgggatgtgtcagctggtcagagccactccctccttctggctgatggagac
tgtgtccagccagtcctgttgtactgtggccagcagcaagagccaatgtcggcacagagt
gagaggtcacaccagggtcaaaggtcatgccagaggtcacccaacagagcagagagttat
acagtcagacccaccctgctgcccttctgcatggagatgggttacattagcagtgtgtgc
agcggtggtcagagctgtgcgttgctggctgaccagaacatcatgggttttatctcagct
atccatgagctggcctcaagagagagacagttctactgctggtcgtgcaacgtcaggaag
ctccttctcacaccactacgcaacagagagagtgtatgtccgtcgttaggtaagccatgc
actcatctcttctcctctctctgtgagagttttgttcgtctgagcgtcctgattggtcga
cactccacgtcactcagctacttcctgcatgatgtgcagggccgtgatgtcacttccctt
cccctgctgacacacactgagcactttctggacatttataaagagtattgttcttcatta
ggtaacttccaggtgatggatggattccaatcactccataaactctcgcttgagtgttta
ggctctcagcagaccatgctcgctcagctgtgtgtatcagaccagtctgccagtggtgat
gttgatctggtttcgttgttgtactggcctctgcagcagctccaccagtacagccgagtc
ctgctcaaattggcagcctgttacgatgtgttaactacagagtatcagtccctccatcag
ggctgtagtcagtatgagtctctgtctttgtccctgttgaggaggaagaaggaggctgaa
accaccttgctcttctggaagacccattctggaaaaactactgaggttctgcgtctccca
cagcgccgtgtggtgtgtgaaagcagcaacagatctctgactctacagaatgctgggcgg
ttctccaaccactggttcatgctgttcaatgacgcactggtgcacacacagggtgccatt
ccctctcagagccttttctccacacatcacatctatcctctgacctgtctgtgggtgaaa
ccagttactgaagatagcagcggactctatgccatcaaaattacatgtccagaggagagt
ttcaccctggtagcctcgacaccacaagaaaagaacaagtggctgcgatctcttaaccag
gcggtggatcacatgctgggtggtggaggtcaagggtcgtcaccggggatgacggcaatg
tctcgcacggcctcctacacattcactggagagggacggtttaaagacgcccagtacacc
gggggctggatggcaggacgagttcatggcagaggcaccatgaagtggccagatggacgg
acctacagcgggaactttaagaatggactggaggatggctatggagactgtataatacct
aacaaagtgctgaataagcctgacagctaccaaggacactggagagatggcaagatccat
ggttttggcaagtacaagtatgccagtggtgaagtgtacgagggctgtttctgtgatggg
cagcgacatggttacggtatgctgagctccggtaagctggacaagacctcctccagcgtt
ttccttggccagtggatccatgacaggaagacaggatatggagtctatgatgacatcacc
agaggtgagaagtacatgggactgtggttggatgagcagcggcatggcaacgctgtggtt
gtcacccagtacggtgtatactatgaagggaccttcagagacaacaagatgattggtccg
ggtctgatggtgtcagatgatgacacagctttccatggggagttttctgatgactggaat
gccaacgggaagggtgttttatccctggctaacggtgactgcctggaaggcctgttcagc
ggagagtggaccgcagggctgaaggtggttggaacgtacaccaaaccagccattgatgac
ccagaaaacaaagagagaaacctcctgctcaggttgggtcagtacgtggtgcctgcaggt
cagaggtgggtctgtgtgtttgatgaatgttggagtcgactgggctgtgatgctgctggg
agaggagagaggactgcagcctgggagaacattgctgtcactataacaagtgcacgacga
caaagcccagacctcagtaggtctcagagcaaagtactggagtgtttggagtttattcct
cagcatggagaacccgtcacaacagcaaactatgacaacatacgaagatacctcatcaag
gcatgtgagacccctctccaccctctgggctggctggtggagacgttggtgaccgtctac
aggatgacttacgtcggtgtgggatccaatcgcagactgctcaggcaggccgtccaggag
cttctggcctacctcacacatttctacaatattgtccggtttctgtttccggggctacca
aatgatggcggcatcatcccagacccccctgcccctccatctaagaggagacacaattct
aacatagcagagcaaggcagcattgtggtggtgagctgctcctctctgctgctccctctg
ctgctccctcgactctaccctcctctctttaccctgtactgcctgcaggaggagcatgag
gaggcccagtactgggagcgcgtcctccaactcaacaaacagcccgaccagtcactgctc
cgcttcctgggagtgcaggagaagttttggccagtgtgtatgtcaattctgggagagaaa
aagcagattgtgtctagcagtaaagatgcctgcttcatttccgctgtagagacactccaa
caaatcagcaccaccttcactccatcagacaaactcctcgtcatccagaagacgtttgag
gagttaacccaggaagtaaaacctatgttggatggcaacttcctgtggtgcatggatgac
ctgctccctctcttcctctatgtggtgctcagggcgaggatcaggaacctgggagctgag
gtcagtctgatagaagatttgatggatcccaacgttcagcatggagagttgggactaatg
ttcaccacactgaaggcctgctacatccagatccagcaggagtcgactacgtag
DBGET
integrated database retrieval system