Siniperca chuatsi (mandarin fish): 122885763
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Entry
122885763 CDS
T08948
Symbol
rab5b
Name
(RefSeq) ras-related protein Rab-5B
KO
K07888
Ras-related protein Rab-5B
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04137
Mitophagy - animal
schu04144
Endocytosis
schu04145
Phagosome
schu04148
Efferocytosis
schu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
122885763 (rab5b)
04145 Phagosome
122885763 (rab5b)
04137 Mitophagy - animal
122885763 (rab5b)
04148 Efferocytosis
122885763 (rab5b)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
122885763 (rab5b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
schu04131
]
122885763 (rab5b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
schu04147
]
122885763 (rab5b)
04031 GTP-binding proteins [BR:
schu04031
]
122885763 (rab5b)
Membrane trafficking [BR:
schu04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
122885763 (rab5b)
Endosome - Lysosome transport
122885763 (rab5b)
Exosome [BR:
schu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
122885763 (rab5b)
Exosomal proteins of other body fluids (saliva and urine)
122885763 (rab5b)
Exosomal proteins of colorectal cancer cells
122885763 (rab5b)
Exosomal proteins of melanoma cells
122885763 (rab5b)
GTP-binding proteins [BR:
schu04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
122885763 (rab5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
Gtr1_RagA
RsgA_GTPase
MMR_HSR1
SDR-like
AAA_16
B12-binding
Tfb2_C
Motif
Other DBs
NCBI-GeneID:
122885763
NCBI-ProteinID:
XP_044073284
LinkDB
All DBs
Position
LG12:26265097..26271296
Genome browser
AA seq
216 aa
AA seq
DB search
MSSRGSGGRSNGTLPQTKICQFKLVLLGDMAVGKSSLVLRFVKGQFDEFQETTIGAAFLA
QSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVFDITKPETFERAKAWVKELQ
RQASPNIVIALAGNKADLAERRLVEYEEAQTYAEDTGLLFMETSAKTAMNVNELFLAIAK
KMPKTDTQNPTHAARHRGVNLQDPDAHSTRACCGGN
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atgagctccagagggagtggaggccgctccaacggcacactaccacaaaccaagatctgc
cagtttaagttggtgctcctgggtgacatggctgtgggcaagtccagcctggtgctgcgt
ttcgtcaagggacaatttgacgagttccaggagacaaccataggagctgcattcctggct
cagtcggtgtgtctagatgataccacagtgaagtttgagatctgggacactgcaggacaa
gagcgataccatagcctggctcctatgtactaccgtggtgctcaggctgctatcgtcgtc
tttgacatcaccaagccggagacttttgagagagccaaggcctgggtgaaggagctgcag
aggcaggccagtcccaacattgttattgccctggccgggaacaaggctgacctggcagag
aggagactagtagagtacgaggaagcccagacatatgctgaagacactggcttgctcttt
atggagacctctgccaagacagctatgaacgtcaatgagctcttcctggccattgcaaaa
aagatgccaaaaacagacacccaaaaccctacacatgcagcgcgacatcggggagtcaac
ctccaggacccagatgcccactctacccgagcctgctgtggtgggaactag
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