KEGG   Siniperca chuatsi (mandarin fish): 122885763
Entry
122885763         CDS       T08948                                 
Symbol
rab5b
Name
(RefSeq) ras-related protein Rab-5B
  KO
K07888  Ras-related protein Rab-5B
Organism
schu  Siniperca chuatsi (mandarin fish)
Pathway
schu04137  Mitophagy - animal
schu04144  Endocytosis
schu04145  Phagosome
schu04148  Efferocytosis
schu05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:schu00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    122885763 (rab5b)
   04145 Phagosome
    122885763 (rab5b)
   04137 Mitophagy - animal
    122885763 (rab5b)
   04148 Efferocytosis
    122885763 (rab5b)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    122885763 (rab5b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:schu04131]
    122885763 (rab5b)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:schu04147]
    122885763 (rab5b)
   04031 GTP-binding proteins [BR:schu04031]
    122885763 (rab5b)
Membrane trafficking [BR:schu04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    122885763 (rab5b)
 Endosome - Lysosome transport
    122885763 (rab5b)
Exosome [BR:schu04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   122885763 (rab5b)
  Exosomal proteins of other body fluids (saliva and urine)
   122885763 (rab5b)
  Exosomal proteins of colorectal cancer cells
   122885763 (rab5b)
  Exosomal proteins of melanoma cells
   122885763 (rab5b)
GTP-binding proteins [BR:schu04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    122885763 (rab5b)
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU Gtr1_RagA RsgA_GTPase MMR_HSR1 SDR-like AAA_16 B12-binding Tfb2_C
Other DBs
NCBI-GeneID: 122885763
NCBI-ProteinID: XP_044073284
LinkDB
Position
LG12:26265097..26271296
AA seq 216 aa
MSSRGSGGRSNGTLPQTKICQFKLVLLGDMAVGKSSLVLRFVKGQFDEFQETTIGAAFLA
QSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVFDITKPETFERAKAWVKELQ
RQASPNIVIALAGNKADLAERRLVEYEEAQTYAEDTGLLFMETSAKTAMNVNELFLAIAK
KMPKTDTQNPTHAARHRGVNLQDPDAHSTRACCGGN
NT seq 651 nt   +upstreamnt  +downstreamnt
atgagctccagagggagtggaggccgctccaacggcacactaccacaaaccaagatctgc
cagtttaagttggtgctcctgggtgacatggctgtgggcaagtccagcctggtgctgcgt
ttcgtcaagggacaatttgacgagttccaggagacaaccataggagctgcattcctggct
cagtcggtgtgtctagatgataccacagtgaagtttgagatctgggacactgcaggacaa
gagcgataccatagcctggctcctatgtactaccgtggtgctcaggctgctatcgtcgtc
tttgacatcaccaagccggagacttttgagagagccaaggcctgggtgaaggagctgcag
aggcaggccagtcccaacattgttattgccctggccgggaacaaggctgacctggcagag
aggagactagtagagtacgaggaagcccagacatatgctgaagacactggcttgctcttt
atggagacctctgccaagacagctatgaacgtcaatgagctcttcctggccattgcaaaa
aagatgccaaaaacagacacccaaaaccctacacatgcagcgcgacatcggggagtcaac
ctccaggacccagatgcccactctacccgagcctgctgtggtgggaactag

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