Siniperca chuatsi (mandarin fish): 122886011
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Entry
122886011 CDS
T08948
Name
(RefSeq) acetylcholine receptor subunit alpha-like isoform X1
KO
K04803
nicotinic acetylcholine receptor alpha-1
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
schu04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
122886011
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
122886011
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
schu04040
]
122886011
Ion channels [BR:
schu04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
122886011
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Claudin_2
Motif
Other DBs
NCBI-GeneID:
122886011
NCBI-ProteinID:
XP_044073799
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Position
LG12:complement(15089925..15097833)
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AA seq
454 aa
AA seq
DB search
MNTVFFIFHLVILAGVAWASSDETRLVKTLFTGYNKVVRPVNHFKDPVVVTVGLQLIQLI
SVDEVNQIVSSNVRLKQKWKDVNLQWNPEDYGGIKKIRVPSTDIWRPDLVLYNNADGDFA
IVHETKVLLEYTGMITWNPPAIFKSYCEIIVLHFPFDLQNCSMKLGTWTYDGNLVVVNPD
NDRPDLSNFMESGEWVMKDFRSWKHWVYYACCPDTPYLDITYHFLMLRLPLYFIVNVIIP
CMLFSFLTGLVFYLPTDSGEKMTLSISVLLSLTVFLLVIVELIPSTSSAVPLIGKYMLFT
MVFVIASIIITVIVINTHHRSPSTHTMPDWVRRVFIETIPNIMFFSTMKRPGKEKQNKSI
YGADFDISDISGNQTSSIPYQSPISKNPDVRSAIEGVKYIAETMKSDEESNNAAEEWKFV
AMVLDHILLCVFMAVCLIGTLGVFAGRLIELSML
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgaatactgtgtttttcatttttcatctagtcattctagcaggtgttgcctgggcctcc
tccgatgaaacacgtctggtcaaaaccctcttcactggctacaataaggtcgtccgtcct
gtcaatcactttaaggacccggtggttgttactgtaggccttcagctcatccagctcatc
agtgtggatgaggtcaaccagatcgtcagcagcaatgtgcgactgaaacagaaatggaaa
gatgtgaacttgcagtggaacccagaggattacggtggcatcaaaaagatcagagttccc
tccactgacatttggcggcctgatctggttctctacaacaatgctgatggtgactttgcc
attgttcatgaaaccaaagtgctgctggagtatacaggaatgattacatggaacccacct
gccatcttcaagagctactgtgaaattattgtgctgcatttcccctttgacctccagaac
tgcagtatgaagctgggtacctggacctacgatggaaacttggtcgtcgtcaatcctgac
aatgaccgccctgatctgagtaactttatggaaagtggagagtgggtgatgaaggatttc
cgcagctggaagcactgggtgtactacgcttgctgtccggacaccccttacctggacatc
acctaccacttcctcatgctgcggctcccactgtacttcatcgtcaacgtcatcatcccc
tgcatgctcttctccttcctgactggccttgtcttctatcttcctacagactctggtgag
aagatgaccctcagcatctctgtcttgctgtctctgactgtgtttctgctggtcattgtg
gagctgatcccctctacctccagcgctgtaccactcattgggaagtacatgctcttcacc
atggtcttcgtcattgcctccatcatcatcactgtcattgtcatcaacacccatcaccgc
tccccaagcactcacacaatgccagactgggtccgcagggtttttattgaaactattccc
aacatcatgttcttctcaacaatgaaacgcccaggaaaggaaaagcagaataaaagtatc
tatggtgctgattttgacatctcagacatctctggcaaccagacctcctctattccctat
cagtcacccatcagcaagaatcccgatgtccgcagtgccattgaaggagtcaagtacatt
gcagaaaccatgaaatcagatgaggaatccaacaatgctgctgaagagtggaagtttgtg
gccatggtgttggatcatattctgctgtgtgtgtttatggccgtgtgtctcatcggcaca
ttaggcgtgtttgcaggccgcctcattgagctgagcatgctctaa
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