Siniperca chuatsi (mandarin fish): 122886016
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Entry
122886016 CDS
T08948
Symbol
si:ch211-199f5.1
Name
(RefSeq) protocadherin-8
KO
K16499
protocadherin delta 2
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
schu04515
]
122886016 (si:ch211-199f5.1)
Cell adhesion molecules [BR:
schu04515
]
Cadherins
Protocadherins
122886016 (si:ch211-199f5.1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
DUF4577
TMEM154
FctA
Motif
Other DBs
NCBI-GeneID:
122886016
NCBI-ProteinID:
XP_044073807
LinkDB
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Position
LG12:16344572..16348786
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AA seq
991 aa
AA seq
DB search
MRLLTEGKKMIQGKFRPITYCHQWIFIFAIHQFLFASLAQSEGNTIRYQTNEEDAPGTVI
GNLAKDMSLSLSHSSKTNFRMMKQFNDSFIGVRESDGELTVGERIDRERICRHTLQCLIT
FDVVNFSKDRYKLIHVEVEIKDINDNSPEFPNKESIVEISENAAAGSRIPLDPAVDADVG
SNYIQSYQISVNSHFTIDVLLRADGVKYAELVLMKELDRETQSSYTVELVATDGGNPFRS
GSTKITIKVTDFNDNSPVFDQNSFSVSLPEDAPVGTVILDLNAIDADEGLNGEVVYGFGK
QVSHEIRELFQVDNKSGRLTLRSPVDFEDKSTYELDVQATDLGPNPTPSVCKIIIHVTDV
NDNAPEISITPMTSITTGTAYISEAADKDSLVALISTLDRDSGVNSQVHCTLYGHDHFKL
RQAYEDSYMIVTAAALDRERISEYNLTVMAEDFGSPPLRKITQYTIRLSDENDNAPHFTK
GVYEVLVVENNAPGAYITTVEASDADLGNNGKITYRLVASVIMGSPVNTFVSLNSVSGSI
YALRSFNYEVMKQLDIHIQASDGGSPQLQSTAVIRLKIVDQNDNQPSIIQPPLYKGSAEV
FLPKDAPAGYVVTQIKATDADEGINAQLSYKITEGGHLGFSINKDTGKVHVSRQLMYDLT
DNVKVTVSVSDNGSPALTSTAIIHFSFIEETLPSMPSLAQNGSDELFEWDMSIAIIIVLA
GSCSLLLLAIILITTICSRRKKETREGGCDEKEDIPNVEKVESGHIDSLIANHKGKVFDA
HPFPEKPPLASSNTTETGCEDGRQTAGIFESNSRVMEGKLKGYSTLPGYGKETVRPITIW
KGNSFTTISARDPHISGKDSGKGDSDFNDSDSDISGDVHKKESPPTNSLWACTSECKVLG
HSDRCWSPSATRPNTSMACGPHLSTFSKTASLPRDTRRENYYPAHIPKTNGLQSVYEKVQ
HQEFDYILVGPPTPARIQEADEISIPEYTNS
NT seq
2976 nt
NT seq
+upstream
nt +downstream
nt
atgagactgcttaccgagggaaagaagatgatacagggcaaatttaggcctataacttat
tgccaccagtggatttttatattcgcaatccatcaatttttatttgcctcactggctcag
tctgagggaaatactattcgataccagaccaatgaggaggacgcaccaggtacagtcatc
ggaaaccttgccaaggacatgtccttgagtctgtctcattcctccaagaccaatttcagg
atgatgaaacaattcaatgattcattcatcggggtaagagaaagcgacggggaactcact
gtcggggaacgaattgacagggaaagaatctgcagacacactctacagtgtctcattact
tttgacgtggtaaatttctccaaagatcgctacaaattgattcacgtagaggtggaaata
aaggacatcaatgacaactctccggagtttccaaacaaggaatctatagttgagatctca
gagaatgcagcagcggggtcccgcatccctttagacccagctgtggacgctgatgtcgga
tcaaactacatccaaagctatcaaatttctgtcaacagtcattttaccattgatgtgctc
ctgagagcggatggggttaaatatgcggaattggtgctaatgaaagagctagacagggag
actcagtcatcatacactgtggagctggtcgccacagacggagggaaccctttcagatcg
gggtcaacaaagataactatcaaagtgactgactttaatgacaatagtcccgtttttgac
cagaatagtttctcagtcagtttgccagaggacgcaccggttggcacagttatactggac
ttaaacgcaattgatgctgatgagggtttaaacggagaggtcgtctacgggttcggaaaa
caggtttctcatgagatccgagaacttttccaagtggataataaatcaggtcgactgacg
ctcaggagcccggtggattttgaggacaaaagcacctacgagctagacgtgcaggcgact
gatctgggacccaacccgaccccctccgtgtgcaaaatcataattcacgtcacggacgtt
aatgacaatgccccagaaatcagcatcaccccgatgacctccatcacgacaggcactgca
tacatcagcgaggcggcagacaaggacagtctggtggcgctgatcagcaccttggacaga
gactcgggtgttaacagccaggtccactgcacattatacggccacgaccatttcaaactc
cggcaggcttacgaggacagctacatgatagttacagcagcagccctagacagggagagg
attagtgagtataacttgacggtcatggctgaggattttgggtcacctccactgagaaag
atcactcagtacaccattagactcagcgacgagaatgacaacgcccctcactttactaaa
ggtgtctatgaagttttagtggtggaaaacaatgccccgggtgcttatatcaccacagtt
gaggccagcgacgctgatctgggcaataatggcaaaatcacctacagacttgtggccagt
gttatcatggggtccccagtgaacacctttgtgtctcttaattcagtgtctggctctata
tatgccctgaggagttttaattatgaagtaatgaaacagctagacatacacatccaagca
agtgatggggggtcaccacagctgcagagcacagctgtcatcagactaaaaatagttgat
cagaatgacaaccaaccttctatcatacaaccacccctttacaaaggatctgctgaggtt
tttctgcccaaagatgcgcctgcaggttatgtggtaacccagataaaggccacagatgct
gatgaaggcataaatgcacagctgtcctataaaatcacagaggggggacacctgggtttc
tctatcaacaaagacacagggaaggtgcacgtgagtcgacagctgatgtatgatctcaca
gacaatgtcaaagtcacagtgtcggtcagtgacaatggatcccccgcgcttacctccaca
gccattatacacttcagctttatagaagaaactcttcccagtatgccttccttggctcaa
aatggcagcgatgagctctttgaatgggacatgtccattgccataatcattgtcctggca
gggagctgctctctcctcctgttggctatcattctcatcacaaccatttgcagccgccgg
aaaaaagagacaagggagggggggtgtgatgaaaaagaagacataccaaatgtggagaaa
gtggaaagtggtcatattgattctttgattgccaaccacaaaggcaaagtgtttgatgcc
catccatttccagagaaacctccattggccagcagcaacacaacagagacaggctgtgag
gatggcaggcagacagcaggcatcttcgagtcaaacagtagggtgatggagggaaaacta
aagggttattctacactaccgggttatgggaaagaaacagtcaggccaataacaatatgg
aagggtaattcattcacaacaatctcagcaagagacccccacatcagtggcaaggacagt
ggaaaaggggacagtgacttcaatgacagtgattctgacataagtggagatgtgcacaaa
aaagagtcgccgccaacaaacagtctctgggcatgtacaagcgagtgcaaagtgttggga
cactcagaccgatgctggagcccttcagctacaaggcccaacacgagcatggcctgtgga
ccgcatctgtcaactttctccaagacagcttcactgccccgggacaccagaagggaaaac
tactacccagctcacatacccaaaaccaatggtttgcaaagcgtgtacgaaaaagttcaa
caccaggaatttgattatattcttgttggtccaccgacaccagccagaatacaggaagca
gatgagatatccattccagagtacacaaactcataa
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