Siniperca chuatsi (mandarin fish): 122886094
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Entry
122886094 CDS
T08948
Symbol
aff3
Name
(RefSeq) AF4/FMR2 family member 3
KO
K15195
AF4/FMR2 family member 3
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
schu03021
]
122886094 (aff3)
Transcription machinery [BR:
schu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
122886094 (aff3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AFF4_CHD
AF-4
AF4_int
Motif
Other DBs
NCBI-GeneID:
122886094
NCBI-ProteinID:
XP_044073948
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All DBs
Position
LG12:complement(18822544..18840504)
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AA seq
1235 aa
AA seq
DB search
MPTVLGGKGKLSIVCFLLRCAYSQVTRSQHNSCAKDTLEDMTQSWTSQQALGGDQAQQIL
YNPKEAKLPTTQQRQSRGDVQLRMTRHPRVAPHKSMLADDLKLSSDDDDTERATHDSASW
DGHSLSAKRAHTHGRRVRHSSSDSSGSDSTAESGSSSLHSRSPSRSPEVHPHPASPANTQ
PPCNSKETDPPSAAQWQLDKWLKKSRKKSASSEQDPSQSIPGRLPSPRTQRAPSPARSWN
SNREYSPSQSPIPSPQFNYSHNNSPLPSPGYSFCPSPSPFPSTCPSPSPSPRHSPIPSPV
PSVCPSPCGSPRASHSPIPREPPRSPSPSLPASSRVRHYPEVQSQNQTQPSLTTTPHRTK
NRSWITPLPNTDTKSKPTNSTHTQPTHQHRPKTRPTQDQDQSQSKSKVSAVLNSNQSHSH
KSRPKPNIYPSSKQLAEAPKAKHTSHFEQTQSSRSNHNSNHKSRPLFQASSQHSPATAKH
LVPTSRETNSGCSQSTSKAATNSNTGLNSRSNPSLKPRTKSWEATAPTPAHVNHTKTTQK
KSQSKEQEVEHRGDNLTQAEGRKPERKEDRHRQKQQGKQERKEDRRLAEEQLLRRPWIES
SAEEEEEEEEEEGVIERQRRREKTARGENRRRREQQHRREWQTVQAKQRQPANTERHSLQ
DDSHHQGRTKKGGRSEEEKELQQDPSPPSSRSPTPRRRSSSSSASSSSKSDSESEYQAPI
TKVPADSTSHKRLPKRGQQGPGRPDANRPKVVHPRGPTSGNPSEEQQSVGKKKLYTLVPF
GRGDKATASSQRGLRNLVVQIDLCLLKRVPDSTTSSTLKKSSSSPSSSSTKNKQREAMKH
LSVPETLTKDSKRKRKLENGVSQRESKRSIPHANDLSGCTESSSHTAELNFVTETTHNGY
LEEYLDSKRPLSPLSPLSDSPESNKPPPKTKTSEQHHVHVHKNRDKNRDSAIKPKMEVEC
VKVSRQPQPPSESWGPAGHRGAMPNHEIPHHAEYYLHEAKRMKHRADAMVDKLGKAVNYI
DAALSFMECGKAMEEGPLEAKSPYTMYSETVELIRYAMRLKSHTGPGARQEDKQLSVLCF
RCLALLYWQMFRLKKDHALKYSKVLLDYFKSSPKVPSTPPDWNDSGKDTGRPPSSLSPDA
KHLRRGSHGGSAFPSLISIPQRIHQMAANHLNITNSVLYSYEYWEVADNLAKENKEFFNY
LNTLSGPLTLHSSIAHAVQYTRQALQWIRISAKLN
NT seq
3708 nt
NT seq
+upstream
nt +downstream
nt
atgcctactgtcctcggtggcaaagggaaactttccattgtctgctttttactccgatgc
gcatattctcaggtgacaagaagccaacacaacagctgtgccaaagatactctggaggac
atgactcagtcctggacgtcccagcaagccttagggggtgaccaggcccaacaaatcctc
tacaaccctaaggaagcaaaactaccgactacacaacaaagacaaagtcggggggatgtt
cagctgcgaatgacccgtcaccctcgtgtggcacctcataaatccatgcttgctgatgac
ctgaagctgagcagtgatgatgatgacactgaaagggcaactcatgattcagcttcctgg
gatggacacagcctgtcagcaaagcgagcgcacacacatggcaggcgggtgagacattcc
agctcggactcttcaggctcagactccactgctgagtcgggcagcagcagccttcactcc
cggagccccagcaggagtccagaagttcacccacatcctgcgtcgcctgccaacacacag
ccaccatgcaacagcaaggagactgatcccccctctgctgcccagtggcagttggataaa
tggctgaagaagtcccggaaaaaatctgccagtagtgaacaggacccctctcagagcatt
ccaggacgccttccctctccccgcacccaaagagccccatctccagccagatcctggaac
agcaatcgggaatacagccctagccaaagccctattcccagcccacagttcaattacagc
cacaacaacagccccctacctagccctggttatagcttctgccctagccccagcccattt
cctagcacctgcccaagtccaagccctagcccgaggcacagccctatccccagtccagtt
ccaagtgtttgccccagtccgtgtgggagcccgagagccagccatagtcctatacctaga
gaacctccaagaagccccagtcccagccttcctgcttcttccagggtccgtcactaccct
gaggttcagagtcagaaccaaacacaacctagcctaacaaccactccccacaggacaaaa
aataggtcatggattaccccattgcctaacaccgacaccaagagcaagcctacaaacagt
actcatactcagccaactcatcagcacaggcccaagactcggcccacacaggaccaagac
caaagccaaagcaaatccaaggtttctgctgttttaaactctaaccagagtcacagccat
aaatctagacccaagcctaacatttatccaagttctaaacagctcgctgaggctcccaaa
gccaaacacacatcacattttgagcaaacccagagtagcagatctaaccacaactccaac
cacaaatccaggcctctgtttcaagctagctcccaacatagccccgcaacagcaaagcac
ttggtccccactagtcgcgaaaccaactctggttgttcccaatctacctctaaagctgct
actaattctaatactgggttgaactctagatcaaaccctagtctaaaacctagaaccaag
tcttgggaggctacagccccaactcctgcgcatgttaaccatacaaaaacaacacagaag
aaatcccagtccaaggaacaggaggtggaacacagaggagataatctgacccaagcagag
gggagaaaaccagagagaaaagaggacagacataggcaaaaacaacaagggaaacaggag
agaaaggaagacaggaggctggcggaggagcagctactgagacgtccctggatcgagagt
tcggcggaagaagaggaggaggaagaggaggaggagggagtgatagagaggcagagaagg
agagagaagacagcaagaggggaaaacaggaggaggagggagcagcaacatagacgcgaa
tggcaaacagtccaggccaaacagagacagcctgccaacacagagcgacacagccttcaa
gacgactcgcaccaccaggggaggacaaaaaagggagggagaagtgaggaggagaaagag
ttacagcaagacccatcacctccttcgtcacgttccccaactcctcgtagacgatcctcc
tcatcctctgcctcctcctcttcaaagtcagattcagaatctgaatatcaggctccgatc
accaaagttccagcggactctacctcccacaagagactccccaagagagggcaacaaggc
ccaggcagacctgatgccaacaggccaaaggtggtgcaccccagaggacccacctcaggt
aatccaagtgaggagcagcagagtgtggggaagaaaaaactctacaccctggtcccattt
gggcgaggtgacaaggctacagcgtcttcccagcgagggcttagaaatctggtggtgcag
atagacctctgtcttctcaaaagggtcccagacagcactactagttccactttaaaaaaa
tcctcctcttctccctcctcttcatcgaccaagaacaagcaaagagaggctatgaaacac
ctgtctgtccctgagactctgacgaaagacagcaaaaggaaacgcaagttggagaatggt
gtgtcacagagagaaagcaagaggagtattcctcatgcaaatgacctctcaggctgcact
gagtcttcatctcacacagcagagctcaactttgtgactgagaccacacacaacgggtac
ttggaagagtacttggacagcaagaggccattgtctcccctgtctccactgtccgacagc
cccgagtccaacaagcctccccccaaaacaaagacctcggagcagcatcacgtccatgtc
cacaagaacagagacaagaatagagattctgctataaagcccaagatggaggtggaatgt
gtaaaagtgtcaaggcagccccaaccaccatccgagtcctggggccctgcaggacacagg
ggggccatgccaaaccatgaaattccacatcatgctgagtactacttacatgaagctaaa
aggatgaagcaccgtgcagacgcaatggtggacaagctggggaaggctgtgaattacatt
gatgccgctctctccttcatggaatgtggaaaagcaatggaggaagggccactagaggca
aagtctccttataccatgtactcagagacagtagagcttattaggtacgcgatgaggctg
aagagccacactggccctggggcgagacaggaagacaaacagctgtcggttctgtgtttc
cgatgccttgccctcctttactggcaaatgtttcgtttaaagaaggaccatgcactgaaa
tactccaaagttctgctggactactttaagagttctcccaaagtgccttctacaccaccc
gattggaatgactctgggaaggatacaggaagacccccttcctcactctcccctgatgcc
aaacacctcagacggggttcgcacgggggcagcgccttcccttctctcataagcattccc
caacgtatccaccagatggcagcaaatcacctgaacattaccaacagtgtcctgtatagc
tatgagtactgggaggtggcagacaaccttgcaaaggagaataaagagttcttcaactac
ttgaatactttgtctgggccattgactcttcacagtagcatcgctcacgcagtccaatac
accagacaggctcttcagtggatacgcattagtgccaaacttaactaa
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