Siniperca chuatsi (mandarin fish): 122886116
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Entry
122886116 CDS
T08948
Symbol
spopla
Name
(RefSeq) speckle-type POZ protein-like A
KO
K10523
speckle-type POZ protein
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
122886116 (spopla)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
schu04121
]
122886116 (spopla)
Ubiquitin system [BR:
schu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
122886116 (spopla)
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Gene cluster
GFIT
Motif
Pfam:
MATH_2
BTB
BACK_BPM_SPOP
MATH
BTB_2
BTB_KLHL33
Motif
Other DBs
NCBI-GeneID:
122886116
NCBI-ProteinID:
XP_044073998
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Position
LG12:complement(9050913..9063956)
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AA seq
392 aa
AA seq
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MSRVPTPPPPGEMSSGPVAESWCYTQVKVVKFSYMWTINNFSFCREEMGEVLKSSTFSSG
PNDKMKWCLRVNPKGLDDESKDYLSLYLLLVSCPKSEVRAKFKFSLLNAKREETKAMESQ
RAYRFVQGKDWGFKKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQDSVNISGQSNMNMLK
VPECQLSDDLGNLWECSRFTDCSLYVGGQEFKAHKSILAARSPVFNAMFEHEMEESKKNR
VDISDVDPDVFKEMMGFIYTGKAPNLEKMADNLLAAADKYALERLKVMCEEALCNSLSVE
NVADTLILADLHSAEQLKAQAIDFINRCSVLRQLGCKDGKNWNSNHATDIMETAGWKSMI
QSHPHLVAEAFRALASAQCPPFGLPRKRLKQS
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgggttcccacccctcctcctcctggggagatgtcaagtggacctgtggcagag
agctggtgttacacacaggtcaaagttgtgaagttttcgtacatgtggaccataaacaac
tttagtttttgcagagaagaaatgggggaggtgttgaagagctcaaccttttcctctggc
cctaatgacaagatgaaatggtgtctgcgagtcaatccaaagggacttgatgatgaaagc
aaagattatctgtcattgtatttacttcttgttagttgtccaaaaagtgaagttagagca
aagttcaagttttctttgttgaatgctaaaagagaggagacaaaagcaatggaaagccaa
agagcatatagatttgtccaaggcaaagactggggcttcaaaaaatttataaggagagat
ttcctccttgatgaagccaatggactcttaccagatgacaagctcaccctgttctgtgag
gtaagcgttgtccaggattcggttaacatttcgggccagtccaacatgaacatgctgaag
gtaccagaatgtcagctgtctgatgacctggggaacctgtgggagtgttcacgcttcaca
gactgcagcctctatgtgggagggcaggagttcaaagcccacaaatccatccttgcagcg
aggtcaccagtctttaatgctatgtttgaacatgaaatggaggagagtaaaaagaaccgt
gttgacatcagtgacgtagacccagatgtctttaaggaaatgatgggcttcatctataca
ggaaaggccccgaatcttgagaagatggcagacaatttgctggcagctgcagataaatat
gctctggagcgtttaaaggtcatgtgtgaagaggccttgtgcaacagcctttcagtggag
aatgtggccgacaccctcatcttagcagacttgcacagtgccgagcagctcaaagcacaa
gccatagattttatcaacaggtgcagtgtcctgagacagctgggctgtaaagatggaaag
aactggaatagcaatcatgctacagatataatggagactgcaggctggaagtcaatgatc
caatcccatcctcacttggtagctgaggcctttcgtgccctggcttcagcacagtgccca
ccgtttggtcttcccaggaagcgtctaaaacagtcctga
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