KEGG   Siniperca chuatsi (mandarin fish): 122886122
Entry
122886122         CDS       T08948                                 
Symbol
col8a1a
Name
(RefSeq) collagen, type VIII, alpha 1a
  KO
K23455  collagen type VIII alpha
Organism
schu  Siniperca chuatsi (mandarin fish)
SSDB
Motif
Pfam: Collagen C1q BclA_C
Other DBs
NCBI-GeneID: 122886122
NCBI-ProteinID: XP_044074018
LinkDB
Position
LG12:19590288..19603490
AA seq 743 aa
MPPLPVPLFLTLLQLLVLTYVSGGAYYGHKQHPQQYQPMQHLQHMGMGKEGFPQQQHLGK
EVPYMQYPHYRKELPQMPMHKGKENVHKGGIYNGGQDKGQTIPGGAEGIPQGEPGPAGPP
GPEGPPGPPGPPGNGQPGPAGRPGPAGPPGLPGLGKPGLPGLPGKPGGNGEAGPQGEMGP
RGEEGPAGQPGPQGPPGPPGLPGIGKPGVQGLPGQPGTKGEPGHKGLPGLPGLPGPKGDK
GMGHPGQPGHKGLPGPPGPAGPRGLPGFGKPGVNGAPGPQGPPGEKGHPGEQGPAGSPGE
GGQPGPPGLPGQGKQGQNGLPGQPGMPGGKGHPGPPGLPGKPGLPGFGKPGLLGPKGDKG
MGGPPGPPGPKGDKGHGGLPGMLGPPGPNGPPGPPGPMGPPGGLGAPGPKGECGEGGPKG
LDGAQGDPGPSGIPGKDGLLGEPGEPGPRGPPGPSGAKGDSGHKGLPGTPGLPGPPGPKG
QTGLPGEVGPQGPKGIPGMDGAAGPFGPPGLPGPKGDSGPPGPPGIVGKGSPGLSGPIGP
PGKEGPSGPPGQPGQAGPPGPPGPPGAPGLSPDMAGVLSEMGPGLDGVKAGSYGMKGKYG
GNGAEVMGATGLEMPAFTAVATTPFPPVGTPVIFDKLLYNGRQNYNPQTGIFTCDMPGIY
YFAYHIHCKGANVWVALMRNNEPVMYTYDEYKKGFLDQASGSAVLPLQPGDTVYIQLPSD
QAAGLYAGQYVHSSFSGYLLYPM
NT seq 2232 nt   +upstreamnt  +downstreamnt
atgcctcccctccctgttcccctgttcctgacactgctacagcttctagtacttacttat
gtgagtggtggggcatactacggacataagcaacaccctcagcaataccagccgatgcag
cacctccaacacatgggcatgggcaaagaaggttttccccaacaacagcaccttggcaaa
gaagtgccctatatgcagtatccccactacaggaaggaactaccccagatgcccatgcac
aagggcaaagaaaatgttcacaaagggggcatctataatggtggccaagacaaaggtcag
acaatccctggtggtgctgagggaattccccaaggagagccaggcccagctgggccacct
ggaccagagggacctccaggacctcctgggcctccagggaatggacaaccaggacctgca
ggacgacccggacctgctggtccaccaggattgcctggattgggcaaaccaggtttgcca
ggactgccaggcaagccaggaggaaatggtgaggctggaccacaaggagaaatgggccct
aggggtgaagaagggccagctggacagccagggccccagggtcccccaggaccacctggg
ctaccaggaataggtaaaccgggggtacagggattaccaggccaaccagggaccaaagga
gagccaggtcacaaaggtctgccaggactaccaggattaccaggacccaaaggagacaaa
gggatgggccatccaggacaacctggtcacaaagggctcccagggcccccaggaccagct
ggcccaagagggttgcctggttttggaaaacctggggtgaatggggcaccaggcccacaa
ggaccaccaggagagaaaggacatcctggagagcaaggaccagctgggtcacctggtgaa
ggaggacagcctggcccaccaggtctacctggtcaaggaaagcaaggtcaaaatggcctg
ccaggacagccaggcatgccaggtgggaaaggtcatccaggaccaccaggtttgccagga
aagccaggactgcctggatttggtaaaccaggactcctaggaccaaagggtgataaaggt
atgggtgggccacctggacctccaggaccaaaaggagataagggccatggaggactacct
ggtatgcttggaccccctgggccaaatggtccaccaggtcctccaggccctatgggaccc
ccaggaggtttaggtgcacctggacctaaaggagaatgtggagaaggaggacctaaaggg
cttgatggagctcagggagaccctggcccttctgggatacctggtaaggatggtctgctt
ggagagcctggagagccgggaccaagaggtccaccaggaccaagtggtgccaaaggagac
agtgggcataaaggtctacctggtacccctggtcttccaggaccccctgggccaaaagga
caaactggattacctggagaagtgggacctcaaggtcctaaaggaatccctggtatggat
ggtgcagcaggaccatttgggcctcctggtcttccagggccaaaaggagatagtggtcca
cctggtccaccaggcattgtaggcaaggggagtccaggtcttagtggtcctataggacct
ccaggaaaagagggcccatcaggaccccctggacaaccaggtcaggctggccctcctggc
ccaccaggcccacctggagcacctggtctgtctcccgacatggctggagtgctctctgag
atgggccctggactagatggtgttaaggcaggtagttatggtatgaagggcaagtatgga
ggcaatggggcagaagtcatgggtgccactgggttggaaatgccagcattcacagctgta
gcaacaactccctttccacctgtgggcactccagtcatctttgacaagctcttgtacaat
ggtcgccaaaactacaacccccagacaggaattttcacctgtgacatgcctggcatttat
tactttgcctaccacattcattgcaaaggagctaatgtgtgggtggctttgatgaggaac
aatgagccagtgatgtatacatatgatgaatacaaaaagggttttctagatcaagcatca
gggagtgcagtattacctctacaacctggggacactgtgtatattcagctaccctcagat
caggctgcaggactttatgctgggcagtatgtgcactcctctttttctgggtatttgtta
tatccaatgtaa

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