Siniperca chuatsi (mandarin fish): 122886142
Help
Entry
122886142 CDS
T08948
Symbol
si:ch211-214p13.3
Name
(RefSeq) nectin-1
KO
K06081
poliovirus receptor-related protein 1
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu03266
Virion - Herpesvirus
schu04514
Cell adhesion molecule (CAM) interaction
schu04517
IgSF CAM signaling
schu04520
Adherens junction
schu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
122886142 (si:ch211-214p13.3)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
122886142 (si:ch211-214p13.3)
04517 IgSF CAM signaling
122886142 (si:ch211-214p13.3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
122886142 (si:ch211-214p13.3)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
122886142 (si:ch211-214p13.3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
schu04515
]
122886142 (si:ch211-214p13.3)
04090 CD molecules [BR:
schu04090
]
122886142 (si:ch211-214p13.3)
Cell adhesion molecules [BR:
schu04515
]
Immunoglobulin superfamily
Nectin family
122886142 (si:ch211-214p13.3)
CD molecules [BR:
schu04090
]
Proteins
122886142 (si:ch211-214p13.3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
ig
V-set
I-set
Ig_2
C2-set_2
C2-set_3
Filamin
Motif
Other DBs
NCBI-GeneID:
122886142
NCBI-ProteinID:
XP_044074056
LinkDB
All DBs
Position
LG12:complement(17156087..17168703)
Genome browser
AA seq
417 aa
AA seq
DB search
MTTQLSSSSSREINTTQRYTLWMETFFCSFNDKLWMPCLSRSTTMFLLVSTFILSTVVEA
LQVIGGNTTVVPGETAILPCKLIETTEDLTQISWQRKTRGKPQIDNFFTVTLDNGPQFVN
GHDNRFKFIGSIKDNSGSLQLSRVTLIDEGTYTCIFTLFPSGNHKTEILLNMLVPPVTNL
TGYRPTLGNEEVSLVTCTAAGSKPPAEVRWITGTLAEKVRALTNSTKHDNGTTTTVSSLL
GVPTREINQHLVQCVISSAALLKEEILPFTIQVYFPPIEVNISERSKGLFECMTEANPNA
DFTWSRSDQLWPQSDVRVEGAKLQFLSMTSDLNGLYQCEASNLYGRKCGHLYVHVTSGAC
TACWTLLLLSLSAVAAAAAAAAVWYFYKYRKRTGEGKPDAEEEDDDEAGRLQAEGSL
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgacaacacagctgtcctctagttcttctcgtgagataaacacgacgcaacggtatacg
ctatggatggagacctttttctgtagcttcaacgataaactatggatgccgtgtttgtcc
aggagcaccactatgtttttattagtgtcgacgtttatcctgagcacggttgtagaagct
ctccaggtgattggaggaaacacaaccgtggtgccaggagagactgctatcttaccctgc
aaactcattgaaaccacggaggacctcactcagatttcatggcagaggaagaccagagga
aaacctcagattgacaatttctttacagtcacgttggacaatggaccacagtttgtcaat
ggacatgataatcgatttaaatttattgggagcattaaagacaacagtggatctctccag
ttatctagggtcacattaatcgatgaaggcacctacacttgcatcttcactttgttcccc
agcggaaatcacaagacagagatacttctaaacatgcttgtgcctccagtcacaaacctg
acaggttatcgccctactttgggtaatgaggaggtttcccttgttacctgcacggctgct
ggttccaagcctcctgcagaggtgaggtggatcactggcactctggcagaaaaggtgagg
gcactaaccaactccaccaagcatgacaacggtacgactaccacagtcagctcgctgctt
ggagtacctaccagagaaatcaaccaacatttggtccagtgtgtcatcagcagcgcagcc
ctgttgaaagaagaaatcctgcccttcaccatacaggtgtacttcccaccaatcgaagtg
aacattagtgaaagatccaaaggcttatttgaatgtatgactgaagccaacccaaatgca
gactttacctggagcagatctgaccagctatggcctcagtctgatgtcagagttgagggt
gcaaagctacagtttctgagcatgacctctgacctgaatggcctctaccagtgtgaagca
tctaacctatatggaagaaaatgtggtcacctctatgtgcatgtgacttcaggagcctgc
actgcttgttggactttacttttgctttccttgagcgccgttgctgctgctgctgctgct
gctgcagtgtggtacttttataaatacaggaaaaggacaggggagggcaaacctgacgca
gaagaagaagatgatgatgaagcagggaggctacaggcagagggatctctttga
DBGET
integrated database retrieval system
