Siniperca chuatsi (mandarin fish): 122886272
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Entry
122886272 CDS
T08948
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2-like
KO
K04955
hyperpolarization activated cyclic nucleotide-gated potassium channel 2
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
schu04040
]
122886272
Ion channels [BR:
schu04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
122886272
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Motif
Pfam:
Ion_trans
Ion_trans_N
cNMP_binding
LPD1
Motif
Other DBs
NCBI-GeneID:
122886272
NCBI-ProteinID:
XP_044074165
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Position
LG13:17333247..17370527
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AA seq
1166 aa
AA seq
DB search
MLNVMDRNEVSPASAATMKKKAKGGSGCSRISAPKAAASKCTRSNSSQNCLDSGSPGAPS
GKHPGAASNVVMDETEDGEEESKFQHPRLRRAGGSGSGGGGGGGGGSIRMKNFTPGGGAA
SSGSRRNSNKEPCHTHTEDAPAAPRPSAASRATETQTPCPGDAAQRGETSRASGAEASES
AVAVEIFNATAGDGCNSVGPISSMKCNKNGECRRDSGTGSLRSIISKQEKQTGGAGRAED
GGSAKRGACNSTTASMDGSITPGGSLTGGQGGESANPGATPVSSGVPEKKDSKVSFSNAP
SRKASSSLHGPTQTQSQQPRNSVTFQKPEDGPPIVPAEDAEPRGSQASFMQRQFSSMLQP
GVNKFSLRMYGSQKAVEREQERVKSAGNWIIHPYSDFRFYWDFTMLLFMVGNLIIIPVGI
TFFKEETTTPWIIFNVVSDTFFLMDLVLNFRTGIIIEDNSDIILDPKTIKKKYLKTWFIV
DFISSIPVDYIFLIVEKGIDSEVYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEI
FHMTYDLASAVMRIFNLIGMMLLLCHWDGCLQFLVPMLQDFPSDCWVSLNKMENDTWSEL
YSFAVFKAMSHMLCIGYGRQAPESLSDIWLTMLSMIVGATCYAVFIGHATALIQSLDSSR
RQYQEKYKQVEQYMSFHKLPADFRQKIHDYYEHRYQGKMFDEESILGELSEPLREEIVNF
NCRKLVASMPLFANAEPNFVTAMLTKLRFEVFQPHDYIIREGTIGKKMYFIQHGVCSVIT
KGTLAMKLSDGSYFGEICLLTRGRRTASVRAETYCRLYSLSVDHFNEVLEEYPMMRRAFE
TVAIDRLDRIGKKNSILMHKVQHDLNSGVFNNQENEMIQEIVKYDREMVKLVDLQRPRAM
SMTPSIGGIFAPPGQPQSGSAIATLQQAVAMSFCPQIANPLVGPGTLQSPRMVRRFQVMQ
NLASPVSISPLQSQPPQAFGGAFGSAISSPPVQSPLAASGRTFQYMASAGPSGSQLSLVQ
HHAPSPTQTQQRPASHKSTHSLHTGSLSQDTRALSASQPSLPQEGTPQAASAAPSPPPST
RTSNNSIGPPQPPHPSLPGPSGVGRSAGAQQRVAFASTPPPGGPAGTGAVAAAAGSGPPD
SGVPKKDSIVSLPELDSARSRLSSNL
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atgctcaatgtcatggacaggaatgaggtttcaccggcgtctgctgccaccatgaaaaag
aaggcgaaaggcggcagtggatgcagccgtatcagcgcacccaaggctgcggcgtccaaa
tgcacaagaagcaacagcagccagaactgtctggactccggctctcccggcgcaccgagc
ggtaagcatcccggtgcggccagcaacgtcgtgatggacgagacggaggacggagaagag
gagtccaagtttcagcatccgcgtttgcgccgagccggggggagcggcagtggcggaggt
ggaggaggaggaggcggcagtatcaggatgaagaactttacgccaggagggggagccgcg
tcctcgggttccaggagaaactccaacaaggagccctgccatacgcacacagaggacgct
cccgccgccccacggcccagtgctgcttccagagctaccgagacccagacaccctgtccg
ggcgatgctgcccagcgcggcgagaccagcagagcatctggggcggaggcgtcggaatca
gcggtcgcggtagagattttcaacgcgacagcgggtgatggttgcaacagcgtcggtcca
atttccagcatgaaatgcaacaaaaacggagaatgcaggagggactctggtaccgggagc
ctgcgctcaatcatctccaagcaggagaagcagaccgggggggcggggagggccgaggac
ggagggagcgccaagcgaggagcctgtaactcgaccaccgccagcatggacggctcgatc
acaccaggcgggtccctgaccggggggcaaggaggagagagcgcaaaccccggtgctacc
cccgtgtccagcggtgtccccgagaaaaaggactccaaggtgtccttctctaacgcacca
agccggaaagcctcatcttcgctgcacggcccgactcagactcagagccagcagcccagg
aactctgtcactttccagaagccggaggatggaccgccaattgtgcccgcagaggacgcg
gagcctcggggcagccaagccagcttcatgcagcggcagtttagtagtatgctgcagcct
ggagttaacaaattctccttacgcatgtatggtagtcaaaaagcagtagagagggagcag
gagagggtaaaatcagctggaaattggattatccacccttacagcgatttcaggttctac
tgggatttcacaatgctgctgtttatggtgggcaacctgatcatcatccccgtgggcatc
accttcttcaaggaagagaccactacaccctggatcatcttcaacgtggtctccgacacc
ttcttcctcatggacctggtgctcaactttcgcactggaatcatcattgaggacaactca
gacatcattttggaccctaaaaccattaaaaagaagtatctaaaaacttggtttattgtg
gactttatctcctccatcccagtggattacatattcctcatagtggagaaagggatcgac
tcggaggtgtacaagactgctcgggccctgaggatcgtccgctttaccaagatcctaagt
cttctgaggctgttgaggctctccagattaatacgctacattcaccaatgggaagagatt
ttccatatgacctatgacctggccagtgcggtgatgcggatctttaacctgattggtatg
atgctgcttctgtgtcactgggatggctgcctacagttcctggttcccatgctgcaggac
ttcccctcagactgctgggtgtccctcaacaagatggagaatgacacctggtcagagctg
tactccttcgctgtattcaaggcaatgagccacatgctgtgtatcggttatggccggcag
gcccctgaaagtctatcagatatctggctcaccatgctgagtatgattgtaggagctact
tgctatgctgttttcattggccatgcaacagctcttatccagtccctggactcctccaga
cgtcagtatcaggagaagtacaaacaagtggagcagtatatgtccttccacaagctgccc
gccgacttccgacagaaaatccatgactattatgagcacagataccagggcaagatgttt
gatgaagagagcattttgggcgaactcagtgagcctctcagagaggaaattgtaaacttc
aactgtcgcaagctggtggcatccatgccgctgtttgccaacgcagagcccaactttgtg
acagccatgttgaccaagctgcgttttgaggtattccagccacatgattacattataaga
gagggcaccattgggaagaaaatgtacttcattcagcacggagtctgcagcgtcatcact
aagggcactctggcaatgaaactctctgatggctcttattttggagagatctgtttattg
acgaggggtcggcgaacagccagcgtgcgagcagagacttactgtcgactctactctctg
tctgttgaccacttcaatgaggtgctggaagaatatcccatgatgagacgagccttcgag
acggttgccattgaccgcctagaccgcataggtaaaaagaactccatcctgatgcacaag
gttcagcatgatctcaactctggtgtgttcaacaaccaggagaacgagatgatccaggag
attgtcaagtacgaccgtgaaatggtgaagctggtggacctgcagcggccgcgggccatg
tctatgaccccttccatcggcggtatctttgctcctcctggccagccgcagtctggctct
gctatcgccactcttcagcaggctgtggctatgagcttttgtcctcaaattgcaaatccc
ctggtgggtccagggactctgcagtctcctcgtatggtgcgaaggttccaggtgatgcag
aacctggccagcccagtctccatctctcctcttcagtctcaaccaccccaggcgttcgga
ggggcatttggatctgcaatttccagcccacctgtccaaagcccgctcgcagcttcagga
cggacttttcagtacatggcgagcgcaggaccctctggttcccagttgtccctagtacag
caccatgcacccagccccacacagacccagcagaggcctgcctcacacaagagcacccac
tcccttcatacaggtagcttgagccaggatacccgggccctgtctgcctcccagccttcc
cttccccaggagggaacgccacaagctgcctctgcagcccccagccccccaccatccacc
cgcacctccaacaactccatcggcccccctcagccccctcaccccagcctgccagggccc
tcgggggtggggagatcggcgggagctcaacagagggtggcctttgcctctacacctcct
cccggtggacctgctggaacgggggcagtagcagcagctgctggatcaggacctccagac
tctggagttcccaagaaagattcaattgtcagccttccagagctagactctgccagatcc
cggctgtcttccaacttgtga
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