Siniperca chuatsi (mandarin fish): 122886276
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Entry
122886276 CDS
T08948
Name
(RefSeq) RNA-binding protein 39-like isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
schu03041
]
122886276
Spliceosome [BR:
schu03041
]
Common components
Common spliceosomal components
General mRNP proteins
122886276
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RBD_DEAH11
RRM_5
RRM_7
Motif
Other DBs
NCBI-GeneID:
122886276
NCBI-ProteinID:
XP_044074179
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All DBs
Position
LG2:complement(314540..330707)
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AA seq
551 aa
AA seq
DB search
MQNSAALQTSRMADDLDIEAMLEAPYRKEDTKAPSPNGQEERSKRKKRSRDRKRSRSRDR
KRSRSRERKRSRSRDKRRSRSRERRGSRERGGRYRDHHKHRRRSKSKSPFKKEKSPIRQP
IDNLTPEERDARTVFCMQLAARIRPRDLEDFFSAVGKGESDTIRMKCAVLVVLMLLAVAV
VTAAVVRLQVRDVRMISDRNSRRSKGIAYIEFVEASSVPLAIGLTGQRLLGVPIIVQASQ
AEKNRAAAAANNLQKGTSGPMRLYVGSLHFNITEEMLRGIFEPFGRIESIQLMMDSETGR
SKGYGFITFADAECAKKALEQLNGFELAGRPMKVGHVTERADASTASSFLDSDELERTGI
DLGTTGRLQLMARLAEGTGLQIPPAAQQALQMSGAIAIGAMAAVSAAMNPALNMSMNSTA
LTLPSQPLATHCFQLSNMFNPSSERRMDHVCVVCPSEEAPGWEMEIQHDVIEECNKHGGV
VHIYVDKNSAEGNVYVKCPSIPAAMAAVNALHGRYFAGKMITAAYVPLPTYHNLFPESAT
ATQLLTPPPRR
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgcagaactctgcagctctacagaccagcaggatggcggatgacctggacatcgaggcg
atgctggaggctccgtacaggaaggaggacaccaaggccccgagccccaacggacaggag
gaacgcagcaagaggaagaagcgcagccgtgacaggaagcgcagcaggagtcgagacagg
aagaggagccggagtcgagagcgtaaacgcagccgcagcagagacaaacgaagaagtcgc
agcagagagcgccgcggcagcagagagaggggggggcgctacagagaccaccacaagcac
cgtcggcggtcgaagagtaaaagtcccttcaagaaggagaagagtccaatcaggcagccg
atagataacctgactccagaggagcgagatgcccggacggtgttctgtatgcagctggca
gcccggatacgacctcgagacctggaggacttcttctctgctgtggggaagggggaatct
gacaccatcaggatgaagtgtgctgtgttggtggtgctgatgctgttggcggttgccgtg
gtaacagccgctgtggtccgtctgcaggttcgggatgtgaggatgatctctgacaggaac
tcccgcaggtcaaagggcatcgcctacatcgagtttgtggaggccagttcagttcctctg
gccatcgggctgacggggcaaaggctgctgggagttcccatcatcgtacaggcctcacag
gcagagaagaaccgtgcagcagcagctgccaacaacctgcagaagggaacatcaggaccg
atgaggctgtacgtcggctctctgcacttcaacatcaccgaggagatgctgagaggaatc
tttgagccgtttggacggatcgagagcatccagctgatgatggacagcgagactggacgc
tctaaaggctacggcttcatcacttttgcagatgcagagtgtgctaagaaagctctggag
cagctgaacggcttcgagctggcgggtcgacccatgaaggtgggtcatgtgacggagcgg
gccgacgcctccacggcttcgtctttcctcgacagcgacgagctcgaacgcaccggcatc
gacctcgggaccaccggacggctgcagctgatggcccgactcgctgagggtacaggtcta
cagatccctcctgctgctcagcaggctctgcagatgagtggagcgatcgctatcggagcc
atggctgccgtgtccgctgccatgaatccagctctcaacatgagcatgaactctactgct
ctgactcttccctctcagccgctcgccacacactgcttccagctttccaacatgttcaac
cccagcagtgaacgcaggatggatcatgtttgtgttgtctgtcccagtgaggaggctcct
ggctgggagatggagatccagcatgatgtcatagaggagtgtaacaaacatggaggagtc
gttcacatctacgtcgacaagaactctgctgagggaaatgtttacgtcaagtgtccgtcc
atcccagctgccatggccgccgtcaacgctctacacggaagatactttgctggtaaaatg
atcacggcggcgtacgtccccctgcccacctaccacaacctgttcccagagtccgccacc
gccacacagctgttgaccccgcccccacgacggtga
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