Siniperca chuatsi (mandarin fish): 122886277
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Entry
122886277 CDS
T08948
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
schu04131
]
122886277
Membrane trafficking [BR:
schu04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
122886277
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
LRR_1
LRR_EndoS
ig
LRR_14
Ig_2
LRRNT
LRR_LRWD1
LRR_6
LRR_9
V-set
Motif
Other DBs
NCBI-GeneID:
122886277
NCBI-ProteinID:
XP_044074178
LinkDB
All DBs
Position
LG13:17462228..17500570
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AA seq
622 aa
AA seq
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MIGSPGPGGRALVPWPRVCRWVLVASLVAIITLTLPGSSQACPPRCECSAQLRSVSCQRR
RLTNIPEGIPTETQLLDLSKNRLRWVQAGDLAPYPRLEEVDLSENLIATLEPNAFATLQS
LKVLKLRGNQLKLVPMGAFAKLGNLTSLDLSENKMVILLDYTFQDLRSLKYLEVGDNDLV
YISHKAFSGLLGLEDLTIERCNLTSISGQTLSYLRSLVTLHLRHLSIIALEDQNFRKLSN
LRGLDIDHWPYLEYISPFSFQGLDLHWLSITNTNITSVPSVSFKNLVHLTHLNLSYNPIT
TLEPWAFKDLLRLKELIMVSTGLMTVELHALGGLRQIRVLNFSSNDLQTLEEGSFHSVNS
LETLRVDGNPLMCDCRLLWILQRRKTLNFDGRVPVCAGPVEVQGVSLSTFTDSALFDHFT
CQKPKIRNRKLQQVIAREGQPVSFLCRAEGEPAPAIVWISPQRRRITAKSSGRIIVLPSG
TLEIRYAQLTDSGTYICIASNAGGNDTYFATLTVRGQPLDAASAFFLNRSLYSGDFFNDT
NLNSTRVFLKFTLDLTTILVSTAMGCITFLGVVLFCFLLLFVWSRGRGQRKNNFTVEYSF
RKSEPATGGSSGGTRKFNMKMI
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgattggctctcctggccctggtgggcgtgccttagtgccatggccgagggtgtgtcga
tgggtcctggttgcttctctggttgccataataaccttgacgctgccaggaagtagccag
gcctgtccgccacggtgcgagtgctcggctcagctgaggtcggtgtcgtgtcagcggcgt
cggctcaccaacatcccagagggcatccccacagagacacaacttctggacctcagcaag
aaccgtctccgctgggtgcaagcaggtgacctggcaccgtacccgcggctggaggaagtg
gacctcagtgagaacctcatcgccacattagagcccaatgccttcgctaccctccagagt
cttaaagtcctgaagttaaggggaaaccagctgaagttagtgcccatgggggcctttgcc
aagctgggcaatctgaccagcctggacctgagcgagaacaagatggtgattttattggac
tacaccttccaggatctgaggagtctgaaatatttggaggtgggagacaacgacctggtt
tatatatcccacaaggcattctcagggttactggggctggaagatctcacaatagagcgc
tgcaacctgacatccatctctggccagacactgtcttacctccgcagtctggtcaccctt
cacctccgtcacctcagcatcattgccctggaggaccaaaacttccgcaagctctccaac
ctgcggggtctggacatcgatcactggccgtaccttgagtacatctccccttttagtttc
caaggcctggacctccactggctctccattaccaacaccaacatcacctctgtcccctcc
gtttccttcaagaacctggtgcacctcacccacctcaacctatcctacaatcccatcacc
acactagagccctgggccttcaaggacctgctgaggctgaaggagctcatcatggtaagc
acagggttgatgacagtggagcttcatgcccttggaggcctccgacagatccgggtcctc
aacttctcctccaacgacctgcagactctggaagagggctccttccactctgtcaacagt
ctggagaccctcagagtggatgggaaccccctgatgtgtgactgccgtctgttgtggatc
ctgcaaagacgcaagaccctcaactttgacggcagagtgccggtgtgtgccgggccggtg
gaggtgcaaggggtcagcctcagcaccttcaccgattctgcactcttcgatcactttaca
tgccagaaacctaagatacgcaaccgtaagctgcagcaggtgatcgctcgtgagggccag
ccagtgagctttctgtgtcgagcagaaggagaacctgcacctgctattgtctggatttcc
ccacagcgcagacggatcacagccaagagttcagggcgcattattgttctccctagtggc
accctggagatccgctacgcccagcttactgacagcggaacatatatctgcatcgccagt
aacgccggaggcaatgacacctacttcgccacactcacagtgcgtggccagccgctagat
gccgcctcagccttctttctcaatcgctcgctgtacagcggcgacttcttcaacgacaca
aatctgaacagcacgcgtgttttcctcaagttcaccttggacctgaccaccatcttggtc
tccacggcaatgggttgcatcaccttcctgggggtggtcctcttctgtttcctgctgttg
ttcgtgtggagccggggacgcggccaacgcaagaacaacttcacagtggagtactctttc
cggaaatctgaacccgccactggaggctcctcaggagggaccaggaagttcaacatgaag
atgatatga
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