Siniperca chuatsi (mandarin fish): 122886282
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Entry
122886282 CDS
T08948
Symbol
rnf126
Name
(RefSeq) E3 ubiquitin-protein ligase RNF126
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
schu04131
]
122886282 (rnf126)
04121 Ubiquitin system [BR:
schu04121
]
122886282 (rnf126)
Enzymes [BR:
schu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122886282 (rnf126)
Membrane trafficking [BR:
schu04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
122886282 (rnf126)
Ubiquitin system [BR:
schu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122886282 (rnf126)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-rbx1
Zn_ribbon_19
zf-C3HC4
zf-RING_11
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
zf-ANAPC11
zf-Nse
zf-RING_16
HypA
zf-C3H2C3
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
122886282
NCBI-ProteinID:
XP_044074187
LinkDB
All DBs
Position
LG13:17326906..17333097
Genome browser
AA seq
311 aa
AA seq
DB search
MAEAPPRPCRFFCHRCSAEISPRLPDYTCPRCESGFIEELPEERSTENGSASTSSTSDQN
RPSFENMDHQHLFTFPSGYGPFALGIFDESFDLRTRLPTEDNRETENRREREMASRQRYS
ARQPRGRHVPRRQGTRHEGVPTLEGIIQQLVNGIIAPTAMPNIGMGPWAMLHSNPMDYAW
GANGLDAIITQLLNQFENTGPPPADRERIKSLPTISITEEHVGAGLECPVCKEDYSIEES
VRQLPCNHLFHNDCIVPWLEQHDTCPVCRKSLSGQNTATDPPGLSGMNFSPSSSSSSSPS
SPSNENATSNS
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagctcccccacggccctgccggtttttttgtcaccggtgttcagcagagatt
agtccgcgtttaccggactacacctgtccacgctgtgaatctggcttcattgaggaactg
cctgaggaaagaagtactgaaaatgggtccgcatccacgtcctccaccagtgatcagaac
cgcccgtcctttgagaacatggatcaccaacatttattcacatttccctctgggtacggc
ccgttcgcccttgggatttttgatgaaagcttcgaccttcgaacgcggctaccaacagag
gacaatcgagagacagaaaacaggagagaacgggaaatggcgtcacggcaacgatacagt
gcacggcaaccacggggtcgacatgttcctcgacgacagggtacgcgccatgaaggagtg
cccacattagagggaattatccagcaactagtaaatggaatcatagcacctacagccatg
ccaaatatcgggatgggaccatgggctatgctacattccaatccaatggactacgcctgg
ggtgccaatggtcttgatgctatcattacacagttattgaaccagtttgaaaacacgggt
ccccctcctgctgacagagagaggataaagagtttacccaccatctccattacagaggaa
catgtgggtgctggtttagagtgtcctgtgtgcaaagaagactacagcattgaggagagt
gttagacaactgccttgcaatcacttgtttcacaatgactgtatagtaccatggctggaa
cagcatgatacgtgtcctgtgtgcaggaagagtcttagtggacagaacacagccacagac
ccaccagggttatcaggaatgaacttctctccctcctcctcatcctcttcctcccccagc
tcacctagcaatgagaatgctaccagcaactcatag
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