Siniperca chuatsi (mandarin fish): 122886304
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Entry
122886304 CDS
T08948
Name
(RefSeq) nuclear receptor ROR-beta-like isoform X1
KO
K08533
RAR-related orphan receptor beta
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
schu03000
]
122886304
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
schu03310
]
122886304
Transcription factors [BR:
schu03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
122886304
Nuclear receptors [BR:
schu03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
122886304
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
PA_decarbox
Motif
Other DBs
NCBI-GeneID:
122886304
NCBI-ProteinID:
XP_044074223
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All DBs
Position
LG13:complement(17740272..17754549)
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AA seq
526 aa
AA seq
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MRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNAMYSCSRQRNCLIDRTNRN
RCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQKSQECVGSGGVGATALSLP
KEDGVCGGGEDGEEGLSRSYSSGGSSSTLSDLDDLFDLPLTPEDASEYCSLELLGGGAST
GNTSNSSSASSSSSSLSNQNSPQQTMLDGADSNGIQLLHTHSHTHPLLAHTHALLDHLPD
DCSTTDLERITQSIVKSHLETCQYSAEDMKRFTWVQYTPEETRAFQNKSAEWMWQQCAHH
ITNAIQYVVEFAKRIAGFMDLCQNDQIILLKAVSWALSVHPSPFLLFLHPSMSLPLSVAT
LSGCLEVLLIRMCRAFNVNNSTIFFNGKFAPAQFFKALGCEDLVSAVFDLGRGLCRLQLS
DEEMALFSAAVLLSPDRPWLTEGQKVQKLQEKVYLALQHSLHKSGASDEKLDKMVSKLPI
MKSICNLHIDKLEFFRLVHPETAYSFPPLYREVFGSEMSLPDSTDS
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgagagctcagattgaggtcatcccctgcaagatctgtggggacaagtcctcaggaatc
cactatggagtcatcacctgcgaaggctgcaagggtttcttccgtcgcagccagcagaac
aatgccatgtactcttgttcccgccagaggaactgcctgatcgaccgaactaaccgtaac
cgctgccagcactgccgcctacagaagtgtctggctttgggcatgagcagagatgcggtc
aagtttggtcgtatgtccaaaaagcagcgtgacagcctctacgctgaggtgcaaaaacac
cagaagtcccaggagtgtgtgggctccggaggcgtgggggctactgctctgtccttaccc
aaggaggacggcgtctgtggtggaggggaagatggtgaagagggtctgagccggtcctac
agcagtgggggctccagctccaccctcagcgaccttgatgacctgttcgacctgccactg
acccccgaggacgccagcgagtactgcagcctggagctgctcggcggaggagccagcacc
gggaatacctccaactcatcgtccgcttcttcctcttcctcatccttgtccaatcagaat
tccccgcagcagactatgctggacggggcagacagcaacgggatccagctcctgcacaca
cactctcacacgcatccgctgctggcacacacacatgcactgctggaccatctgcctgat
gactgctcgacaacagaccttgagcgcatcactcagagtattgttaagtctcacttggag
acgtgtcagtacagcgctgaagacatgaagagattcacctgggtacaatacacacctgag
gaaacacgtgcttttcaaaacaagtcagcagagtggatgtggcagcagtgtgcacaccac
atcaccaatgccattcagtatgtggtggagtttgccaaacgcattgctggcttcatggat
ctgtgccagaatgatcagattatattgctgaaagcagtatcttgggcactctctgttcat
ccctcccccttcctcctctttcttcatccctccatgtctttgcctctatctgtggctacg
ctttcaggctgtctggaagtcctgctgatacgtatgtgcagagcgttcaacgtcaacaac
agcaccattttcttcaatggaaagtttgccccggctcagttcttcaaagcacttggttgt
gaggacctggtcagtgcagtgtttgacctgggaagaggactttgccgtctacagctctct
gatgaagaaatggctctgtttagtgctgccgtccttctatctcctgatcgaccctggcta
acagaaggccaaaaggttcagaaactccaggagaaagtctacctggctctgcagcacagc
ctacataagagtggtgcttctgacgagaaactggacaagatggtgtccaagctgcccata
atgaagtctatctgtaacctccacattgacaaactcgagtttttccgtttggtccaccca
gagaccgcctacagtttcccaccactataccgggaagtgtttggcagcgagatgtctctg
ccggactccaccgacagctag
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