KEGG   Siniperca chuatsi (mandarin fish): 122886328
Entry
122886328         CDS       T08948                                 
Name
(RefSeq) integrin alpha-6-like isoform X1
  KO
K06485  integrin alpha 6
Organism
schu  Siniperca chuatsi (mandarin fish)
Pathway
schu04382  Cornified envelope formation
schu04510  Focal adhesion
schu04512  ECM-receptor interaction
schu04514  Cell adhesion molecules
schu04810  Regulation of actin cytoskeleton
schu04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:schu00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    122886328
   04514 Cell adhesion molecules
    122886328
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    122886328
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    122886328
   04810 Regulation of actin cytoskeleton
    122886328
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    122886328
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:schu04147]
    122886328
   04515 Cell adhesion molecules [BR:schu04515]
    122886328
   04090 CD molecules [BR:schu04090]
    122886328
Exosome [BR:schu04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   122886328
  Exosomal proteins of breast milk
   122886328
Cell adhesion molecules [BR:schu04515]
 Integrins
  Integrin alpha subunits
   122886328
CD molecules [BR:schu04090]
 Proteins
  122886328
SSDB
Motif
Pfam: Integrin_A_Ig_3 Integrin_A_Ig_1 Integrin_A_Ig_2 FG-GAP FG-GAP_3 Bactofilin Integrin_alpha OST_P1
Other DBs
NCBI-GeneID: 122886328
NCBI-ProteinID: XP_044074283
LinkDB
Position
LG13:complement(18284280..18298030)
AA seq 1083 aa
MEGRITCGLRLVVFLLGCGQLSAFNLDIDNVQRKNGDPGSLFGFSLAMHRQLVPTDKRML
LVGAPRAKALSGQKAKVTGGLYSCDMSSTSAGCPRINFDNSEDTTKESKENQWMGVSVNS
QGPGGTVVTCAHRYQRRTNVNTPIESRDIIGRCYVLNPDLTIDPITSDNWHFCESRPRGH
EMFGSCQQGLSATFDKDYHYLIFGAPGAYNWKGVVRLEQRNDTLLELGIYDDGPYEVGDE
NEKNPDLVPAPANSYLGFSLDSGKNLTKKGQLTVVAGAPRANHSGAVVLLKKGRETSNIL
LEEYTLEGEGLASSFGYDLAVLDLNRDGWQDIVVGAPQYFEKDGNIGGAVYVYVNKAGKW
NNVTPTRIDGSKDSMFGLAVENLGDINQDGYDDFAVGAPYENNGIGNVYIYHGSATGLSS
KEAAQILFGQSLRVSLFGYSLAGNMDLDKNFYPDLAVGSLSDSVFVYRARPVVNIKKEIK
FSPNEIDLTKKNCGNSFCLEVEACFTYTASHKSYAPRLTVAFSMEADADKRKNGHMPRAT
FLEASDHSYESNGVITIESKEKKQCVKRRLAIKDNIRDKLRGIPIDVSVDIQDAKRKRRQ
SSTPQLKPVLDAREPMITRSEVHFLKDGCGSDNVCQSNLQVTYRYGHKTTDINTFTPLEM
EDNVPVISLSDHKDIALEVKVTNLNGDDAYEAFVLASFPQSLSYSTYLAPTEHTVTCTAN
KDGSQADCELDNPFKRDTETTFYIILSTSGISLSTTELEIDLQLKTTSNQQIKGPIKAKA
KVTIKLQLSISGQAQPSQVYFTGKVKGEAAMKTESEIGSAITHQFRIINLGKRLTNFGNA
TLEIEWPKETEKGKWLLYLMEISSTGVEQIECSPKGEINPLNKERSNTRMRRAAENTQGG
VEGTMSRLFDEKTSKILSCGNGANCVHIMCPLRGLDSNAVITLNSRLWNSTFIEDYSERR
HVEVIVKAILHVDSTTKNTVLQNADTQVRLTVFPERREAQFGGVPWWIIVLSILFGLLLL
ALLVFLLWKCGFFKRAKYEDKVPSYNAVRIKWEERGINPENGKWENLEKKPWMTTWHDKE
HYS
NT seq 3252 nt   +upstreamnt  +downstreamnt
atggagggcaggatcacctgtggactgcggctggtcgtctttctcttgggatgtgggcag
ctgtcggctttcaacctggacatcgacaatgtccagcggaagaacggagacccaggcagc
ctgttcggtttctctctcgccatgcaccggcagcttgttccaacggataaaagaatgctg
ctggtcggtgccccgagagcaaaagccttgagtggtcaaaaagctaaagtgacaggagga
ctgtacagctgtgacatgagctccacctcagctggttgccccagaattaactttgataat
agcgaggacacaaccaaagaaagcaaagagaaccagtggatgggagtgtcagtcaacagt
caggggccaggaggcacggttgtgacctgtgcccatcgctaccagcgccggaccaatgtg
aacacacccatcgaatcccgtgacatcatcggccgctgctatgtgctgaatccagacttg
actattgatcccataacaagtgataactggcatttctgtgagagccggcccagaggccat
gagatgtttggctcctgccagcagggcctgtctgccacattcgacaaggactaccactac
ctcatctttggggctcctggagcgtacaactggaaaggtgtggtacgcttggaacaaagg
aacgacaccttgttagagttgggcatctatgacgacggtccttatgaggtgggagatgag
aacgaaaagaaccctgacctggtccctgctcctgccaacagctacctgggcttctctctg
gactcggggaagaatctgaccaagaagggccagctgacggtggtagcgggagctcccaga
gcgaaccacagcggagcggtggtgctgctgaagaaaggcagggaaacaagcaacatcttg
ctagaggagtacaccctagaaggagaagggctggcctcgtcttttggctacgatctggct
gtgctggatctcaatagggacggttggcaggacatagtggtgggagcccctcagtacttt
gagaaggacggaaatattggaggagccgtctacgtctacgtcaacaaagccggaaagtgg
aacaatgtcacacccaccagaatagacggatctaaagactccatgtttggcctggctgtg
gaaaacctgggagacatcaaccaggatggttacgatgattttgcagtgggagctccttat
gagaacaatggtatagggaatgtgtacatctaccacggatcagccacgggtctcagctct
aaagaagctgcacagattctgttcggccagtctttaagagtcagtctgtttggctactcc
ttggcaggcaacatggaccttgataagaacttctaccctgacctggctgtcggatccctc
tctgactctgtgtttgtctacagagcccgtccagttgttaacatcaagaaggaaatcaag
ttctcaccaaacgaaatcgacctaaccaagaagaactgtggcaatagcttctgcttggag
gttgaggcatgcttcacctacactgccagccacaagagctatgctcccagactgacggtg
gcattctccatggaggccgacgctgacaaaaggaagaacggtcatatgcccagggcaacc
ttcttggaggcctctgatcatagctacgagtccaatggggtcatcaccatagaaagcaaa
gaaaagaaacagtgcgttaaacgtcggctcgctataaaggacaacattcgagacaagctg
cgtgggatccccatcgatgtgtctgtggacatccaggatgccaaacgtaaacgcagacag
agctcaactcctcagctgaagcctgtcctggacgccagagagccaatgatcactcgatca
gaggtgcatttcctgaaggacggttgtggcagcgacaatgtttgtcagagcaacttgcaa
gtgacatatcgctacggccacaaaacaactgacataaacacgttcactccgttagaaatg
gaggacaacgtgccagtgatctcgctcagcgaccacaaggacatcgccttggaggtcaaa
gtgaccaatctaaatggagatgatgcatatgaagcctttgtgctcgcctccttcccacag
tccctttcttactccacttacctcgctccaactgagcacacggtgacgtgtacagccaat
aaagacggttctcaggctgattgtgagcttgacaacccctttaaacgtgacacagagacg
accttctacattattctgagtacatcaggcatctctctcagcactactgaactggagatt
gatcttcagctaaaaacgacaagtaaccagcagataaaaggccctatcaaagcaaaggca
aaagtgaccatcaagttgcagctgtctatatcaggacaagcccagccatctcaggtctac
tttacaggaaaagtcaaaggtgaggcggccatgaagactgaaagtgaaattggcagtgcc
atcacacaccagttcagaataatcaatctgggaaagcgcttgacaaactttggcaatgcc
acccttgagatcgaatggccaaaggagacagagaaggggaagtggctgctctacctgatg
gagatcagctccaccggagtggagcaaatagagtgctctcctaaaggggagatcaaccct
cttaacaaagaacgaagtaacaccaggatgagaagagcagcagaaaacacccagggaggt
gtcgagggcactatgtcacgtttatttgacgagaagacatctaaaattctgtcctgtggc
aatggggcaaattgtgtgcacataatgtgccccctgcggggcctggacagtaatgcagtc
atcactctcaactcccgcctctggaacagcaccttcatagaggattattcggagcgccgt
catgtggaggtaatagtgaaagccattctgcatgttgatagcacaacaaagaacacagtg
ctgcaaaatgctgacacacaggtgagactgacagtgttcccagagaggcgtgaagcccag
tttggaggagtgccatggtggatcatcgtgctgtccatcctgttcgggctgctgttgttg
gccctgttggtgttccttctctggaagtgtggcttttttaagcgtgccaaatatgaagac
aaggttcccagttacaatgctgttcggatcaaatgggaggagagaggaataaaccctgag
aatggtaaatgggaaaacctggaaaagaagccctggatgacaacctggcatgacaaggaa
cattattcttaa

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