Siniperca chuatsi (mandarin fish): 122886341
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Entry
122886341 CDS
T08948
Name
(RefSeq) nuclear factor 7, brain-like
KO
K12012
tripartite motif-containing protein 35
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
schu04121
]
122886341
Ubiquitin system [BR:
schu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
122886341
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_4
U-box
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
zf-Nse
Prok-RING_4
zf-rbx1
zf-RING_6
PIN_8
zf-ANAPC11
Gp58
PEHE
Fib_alpha
Perilipin
DUF4618
Motif
Other DBs
NCBI-GeneID:
122886341
NCBI-ProteinID:
XP_044074319
LinkDB
All DBs
Position
LG2:393120..395616
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AA seq
462 aa
AA seq
DB search
MASRSEEDFCCPVCHEVFRDPVLLSCSHSFCKDCLQSWWREKPAHECPVCKRRSSKSEPP
LNLALKNLCEAFLQDRDQRASEALCSLHSEKLKLFCLDHQQPVCVICRDSEKHSDHRFRP
IDEAARQHKKKLQETLEPLKKKLQVSEQVKEEFGQTAEHLKVQARHTERQIKEQFKKLHQ
FLEEEEEARMAALREEEEQKSQVLKEKMEALSREIAALSDTVRATEEQLRAEDVSFLLNY
KAAVERVQQRPLLEDPQLPSGALIDQAKHLGNLTFNIWNKMKDMVSYTPVILDPNTAGPE
LILSEDLTSVRLGEKQQLPDNPERIDDYWSVLGSEGFNSGTHSWEVEVGDSTNWRLGVLA
QSAQRKGDILSGFWGIWFYKGEYSAWSPSARPTDLRVQKKLQRIRVNLDWNRGTLSFSDP
DTNTHIHTFTHTFTERMFPFINTGDELQISAVKVCVTVEQSS
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggcttccagatcagaggaggatttctgctgtccggtctgtcatgaggtctttagagat
cctgttcttctgtcatgtagccacagcttctgtaaagactgtctgcagagctggtggaga
gagaaaccagcacacgagtgtccagtttgtaagagaaggtcttcaaagtcagaaccacct
ttaaacctggcgttaaagaacctgtgtgaggccttcttacaggacagagatcagagagct
tcagaggctctctgcagtctgcactctgagaaactcaaactcttctgtctggaccatcag
cagccagtgtgtgtcatctgcagagattcagaaaaacacagcgaccacagattcagaccc
atcgatgaagctgcacgacaacacaagaagaaacttcaggaaactctggagcccttaaag
aagaagttacaggtttctgaacaagttaaagaggagtttggtcaaacagcagaacacctg
aaggtccaggcccgacacacagagaggcagattaaggagcagtttaagaagcttcaccag
tttctagaagaggaagaggaggccaggatggctgcactgagggaggaagaggagcagaag
agtcaggtgctgaaggagaagatggaggctctgagcagagagatagcagctctttcagac
acagtcagagccacagaggagcagctgagagctgaagacgtctcattcctgctcaactac
aaggctgcagtggaaagagtccagcagcgccccctgctggaggatccacagctgccctca
ggagctctgatagaccaggccaaacacctgggcaacctgaccttcaacatctggaacaag
atgaaggacatggtctcctacactcctgtgatcctggacccaaacactgctggtccagaa
ctcatcctgtctgaagatctgaccagtgtgagactaggagagaaacagcagcttcctgac
aatccagagaggattgatgattactggtctgtcctgggctctgagggcttcaactcaggg
actcacagctgggaggtcgaggttggagacagtacaaactggagactgggtgtgttagca
cagtctgcccagaggaagggagacatactgtctggattctggggaatatggttctataaa
ggtgaatactcagcatggtcaccatcagctcgacccactgatctccgagtgcagaagaag
ctccagaggatcagagtgaatctggactggaacagaggaacgctgtcgttctctgatcct
gatactaacacacacatacacaccttcacacacactttcactgagaggatgtttccattc
attaacactggggatgaactgcagatatcagcagtgaaggtctgtgtgacagtggaacag
agcagttag
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