Siniperca chuatsi (mandarin fish): 122886454
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Entry
122886454 CDS
T08948
Symbol
polr2j
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB11-a isoform X1
KO
K03008
DNA-directed RNA polymerase II subunit RPB11
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu03020
RNA polymerase
schu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
122886454 (polr2j)
09124 Replication and repair
03420 Nucleotide excision repair
122886454 (polr2j)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
schu03021
]
122886454 (polr2j)
03400 DNA repair and recombination proteins [BR:
schu03400
]
122886454 (polr2j)
Transcription machinery [BR:
schu03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
122886454 (polr2j)
DNA repair and recombination proteins [BR:
schu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
122886454 (polr2j)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L_2
RNA_pol_L
SHNi-TPR
Motif
Other DBs
NCBI-GeneID:
122886454
NCBI-ProteinID:
XP_044074612
LinkDB
All DBs
Position
LG2:211453..213222
Genome browser
AA seq
129 aa
AA seq
DB search
MNVMDTTTETPVSLKQYRSTKRSFRLFGPIRAQTVDLSSLQQHQQEVPQMKPLQFVSDPG
QLLKDPQVLFAGYKVPHPLEHKIVIRVQTTPDYSPQEAFTNAITDLISELSLLEERFRVA
IKDKQEGIE
NT seq
390 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtgatggacacaacaacagaaacacctgtcagtctaaaacagtacagatcaaca
aaacgatccttcaggctgtttggaccaatcagggctcagactgtagacttgagttctcta
cagcagcatcaacaggaagtgcctcaaatgaaaccacttcagtttgtctctgatccaggt
cagctgttgaaggatccgcaggtgctgttcgctggttataaagttcctcatcctctggaa
cacaagatcgtcatcagagtgcagaccacacctgactacagtccgcaggaagcgttcacg
aacgccatcactgacctcatcagcgagctctctctgctggaggaacgcttcagagtcgcc
atcaaggacaaacaggaagggattgagtga
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