Siniperca chuatsi (mandarin fish): 122886483
Help
Entry
122886483 CDS
T08948
Symbol
depdc5
Name
(RefSeq) GATOR complex protein DEPDC5 isoform X1
KO
K20404
SEA/GATOR complex protein SEA1/DEPDC5
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
122886483 (depdc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
schu04131
]
122886483 (depdc5)
Membrane trafficking [BR:
schu04131
]
Autophagy
Other autophagy associated proteins
SEACIT/GATOR1 complex
122886483 (depdc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEPDC5_CTD
IML1
IML1_N
DEP
Motif
Other DBs
NCBI-GeneID:
122886483
NCBI-ProteinID:
XP_044074666
LinkDB
All DBs
Position
LG13:complement(27381161..27425184)
Genome browser
AA seq
1630 aa
AA seq
DB search
MYFHFSWFIMKTNKSYKLVLHKKGFGGSDDELVVNPKVFPQVSLRDIIEIAHPTDEYSPL
LLQVKSLKEDLQKETISVDQTVAQAFKLRAYQDVIVNIVDPKDVTLDLVELTFKDQYIGR
GDMWRLKKSLVSTCAYVTQKVEFAGIRAQASELWVKGEKVTCGYISEDTRVVFRSTSAMV
YIFIQMSCEMWDFDIYGDLYFEKAVNGFLSDLFAKWKEKNCSHEVTVVLFSRTFYNAKTI
DEFPEILRGSIRQDHEGRFYEDFYRVVAQNERRDEWTSLLVTIKKLFIQYPVLVRLKEAD
GFPVGYNSTAAQGNYLEAINLSFNVFDKHYINRNFDRTGQMSVVITPGVGVFEVDRLLMI
LTKQRMIDNGIGVDLVCMGEQPLHAVPLFKLHNRTTPGDSRVGDDYNLPHWINHSFYTSK
SQNSCSSFTPRIKLAGRKLHAEKFKNSKDHTLCAPKDSENSLPIQVDYDAYDAQVFRLPG
PSRIQRSTNFRMGRDKEMSGRKSWGSVDVSAGIGSSPPVRSGGPEEQRSLASDDSLGPVS
NMLLIPRMPPAQYEVSSSLGYTSTRELLEKMMDSQRDSSAPGRFTVGSAESTLHIRPGGY
TPQRALINPFTPSRMPMKLTSNRRRWMHTFPVGPSGEAIQIHHQTRQNMAELQGSQQRDP
AHTSAELLELAYHEATGRRTAFRQAGDNSLYIGGGMEELTGSPGSNNSGTLTNRGSSFED
FSLNGADPTLLLSAPPTVPSFCCTVGVDWKSLTTPACLPLTTDYFPDRQALQNDYTEGCY
DLLPHSDLERREDEAPVMSASQVFEEFICQRLMQGYQIIVQLNNRKPQPSVATPLGSSPL
YSRGLVSLRRAEEEETVYWLSMGRTFHKVCLKDKIITVTRYLPKYPYESAQIQYSYSLCP
PHSDAQFVSCWVEFGHERLEEYKWNYLDQYICSAGSEDFSLIDSLKFWRTRFLLLPAGGA
RRVADGEGHWDVYGDGAGAGMGCSGDWALLDGFIRFLEGLNRIRRRHRSDRIIRKGTPMK
GLQVTSPLPPYPTEPVAPPQVKKGTSALSALLEMEQNQKTLDEHQQQAKPSTAVSDPSSI
ATAPTYVDSPRKDPAFILDFIRSPRSSYIYHSQLPAEASEAADKGVQPVVTAGAAAQPAG
ETAAGSSTTDPSGQSAAGVVSLSSSSTLLEILDAIKHPTTGVQLLPEQKGLPLNCFISAE
VVHWLVNNVEGVATQGMAVDVMQKMLDEGLVAHASGDALRTFVYGFYFYRIVGEKDGPTS
QPPPTTAGGWSAAALEDFALFQRKWFEVAFVLEERRPCDLPAFLLPWLPSRPASYASRHS
SFSRSFGGRSQAAALLGNLSLTWDNADINAVLTLCGTEGCDGKDSHGYSSATVPEQRTVT
LDVDVNNRSDRTEWCSCYYHGNFSLNAAFEIKLHWMAVTAAVLFEMVQGWHRKAASCGFL
LVPVLEVPFALTSYLYGDPLRAQLFIPLNIHCLLKNGSDNLFEGFEPETYWERMQLFQEA
ILYRFGFVHDKYSASAFNFPSENKPQYIHVTGTVFLQLPYSKRKYSSGQQRRRRNSTTSN
SQGPFGGEERVGYYWAYNTMLTKAWRTGVLGDERLADRLLRDFTDFCVNKNNRLLNFWDS
CQEKMNASAP
NT seq
4893 nt
NT seq
+upstream
nt +downstream
nt
atgtattttcatttcagctggttcattatgaagaccaataagtcatataagcttgtgctg
cacaagaaaggttttggtggaagtgatgatgagttggttgtcaacccaaaagttttccct
caagtcagtctaagggatataatcgagattgcacacccaacagatgaatacagccctctc
ctgctgcaagtgaagagcctaaaagaggaccttcagaaagagacaatcagtgtggaccag
actgtagcacaagccttcaaactacgtgcttaccaggatgtcattgttaacattgtggac
ccaaaggatgtaacgctggacctggtggagctgacgttcaaggaccagtacatcggcaga
ggagacatgtggagactgaagaagagtctggtgagcacctgtgcttatgtgacacagaaa
gtggagtttgcaggaatcagagcccaggccagtgaactctgggtgaagggagagaaagtg
acctgtgggtacatcagtgaagacaccagggtggtgttcagatccacatctgcaatggtg
tacatctttatccagatgagttgtgagatgtgggactttgacatctatggtgatctctac
tttgagaaggctgtaaatggtttcctgtcggaccttttcgccaagtggaaggagaagaac
tgcagtcatgaggtgacagttgtacttttctcacgtacattctacaatgccaaaactatt
gatgaatttcctgagattctgagagggtccatcagacaggatcacgagggacgtttttat
gaagacttttacagggttgtggctcagaatgagagacgggatgagtggacatcattgctg
gtcactatcaagaagctattcattcagtatcctgtcctggtgcggctgaaagaagcagat
ggttttcctgttggttacaactcaactgctgctcaaggaaactacctggaggccattaac
ctttccttcaatgtgtttgacaagcactacatcaaccgtaactttgaccgcactggccag
atgtcagtggtcatcacaccgggggtgggcgtgtttgaagtcgaccgtctgcttatgatt
ctcaccaaacagcgaatgattgacaacggtattggggtagacttggtgtgtatgggggag
cagccattgcatgcagtaccattattcaagctgcacaacagaacgacacctggagactct
cgtgtgggagacgactataaccttcctcactggatcaaccacagcttctacacctccaaa
agtcagaactcttgtagctccttcacccctcgaatcaaactggctggccgcaagcttcat
gctgagaaattcaagaacagcaaggaccacactctctgtgctccaaaggactctgaaaac
agcctgcctatacaagtggactacgacgcctatgatgctcaggtgttcagactacctggt
ccttcacgaattcagaggagcaccaacttcaggatgggtcgagacaaagagatgagcggg
aggaagagctggggctcggtggatgtcagtgcaggcataggctcatcccctcccgttcgt
tctggaggtcctgaggaacagcgtagcttggcctctgatgatagtctgggcccggtgtcc
aacatgctgcttataccccgcatgcctcccgcccagtatgaagtcagcagctccctggga
tacaccagcaccagagagttgttggagaagatgatggactctcagcgggactccagtgcc
ccgggcaggttcacagtgggaagtgctgagtccaccctgcacatccgtcctggaggttac
acccctcagagagcactcataaatcccttcaccccatccaggatgcccatgaagctcacc
tccaaccggcggcgctggatgcacaccttccctgtcggtccttctggagaggcaatccag
atccatcaccagaccagacagaatatggctgaactgcagggcagccagcagagggatccc
gcccacacctctgctgagctgctggagctcgcctatcacgaggccactggaaggcgaaca
gcctttaggcaagcaggagataacagcctttacatcggtggaggaatggaagagttgact
ggaagtccagggagcaacaacagtggaactctaaccaaccgcggctcctcatttgaagac
ttttctctcaatggtgctgatccaaccctgctgctgtctgcacccccgacagtgcccagc
ttctgctgcacagtgggggtggactggaagtctctgaccacaccggcctgcctgcccctc
accactgactacttccctgaccgtcaggcgctgcagaacgattacactgaaggctgctac
gacctactgcctcacagtgacctggagaggcgggaagatgaagccccagtgatgagtgcg
tctcaggtgtttgaggagtttatctgtcagaggttgatgcagggctaccagatcattgtc
caactcaataacaggaaaccacagccctctgtggccacaccgcttggcagcagccctctt
tactccagaggtctggtttctctgcgtcgagcagaggaggaggagacagtttactggctc
agtatgggccggaccttccataaagtttgtctcaaagacaagataatcactgttactcgc
tacctgcccaagtacccgtacgagtcagctcagatccagtacagctacagcctgtgtcct
ccacattctgatgctcagtttgtgtcctgttgggtggagtttggccatgagagactggag
gaatacaagtggaactacctggaccagtacatctgctctgctggctctgaggacttcagt
ttgatcgactctctgaagttctggaggactcgcttccttctgctgccagccggtggagct
cggcgggtggcggacggggaggggcactgggatgtttatggggatggagcgggtgctgga
atgggttgcagcggggactgggccctgctggatggcttcatccgcttcctggagggtctc
aaccgcattcggcgtcgccatcgctctgacagaatcattagaaagggcacaccaatgaaa
ggattgcaggttaccagtcctctccctccgtatcctaccgagcctgtggcacccccacaa
gtcaagaaaggcacatcagctttatcagccttactagagatggagcagaaccagaagacg
ctggacgagcaccagcagcaggcaaagccctcaacagccgtcagtgacccctcaagtatt
gccacagctcccacatatgtagacagtccccgcaaggatcctgcctttattttggatttt
atacgtagccctcgctcctcctacatctatcactctcagttgcctgctgaagccagtgag
gctgcagataaaggagtccagccagtagtgacagctggggcagcagcacagcctgcagga
gagactgcagccggcagcagcaccacagaccctagtgggcagtctgcagcgggagttgtt
tctctgtcctcttcctcaacactcttggagatcctggatgccatcaaacatcccacgaca
ggtgtacagctgctcccagagcagaagggcctaccactcaactgctttattagcgcagag
gtcgttcattggctggtcaacaatgtggagggcgtggccacacaggggatggctgtggat
gtcatgcagaaaatgctggatgaaggtttggtggcccacgcttctggagatgctctgcgc
accttcgtctacggattctacttctacaggatagtaggagagaaggatggcccgacctcc
cagcctccccccacgacggctggaggctggtctgctgcagccctggaggactttgccctg
ttccagaggaagtggttcgaggtggccttcgtgctggaggagcggcgaccctgcgacctc
ccggccttcctcctgccctggctgcccagccggccagcctcctacgcaagtaggcacagc
tccttcagccgcagctttggaggacgcagccaggccgccgcactgctaggaaacctctct
ttgacctgggacaatgcagacattaatgctgttttaactttatgtgggactgaaggttgt
gatgggaaggattcccatggttacagctctgctacagtcccggagcagaggacggtcact
ctggatgtggacgttaacaaccgcagtgaccgaaccgaatggtgcagctgttattaccat
ggaaacttctccctcaacgctgcctttgagatcaagctgcactggatggctgtcactgct
gcagtgctttttgagatggttcaagggtggcacaggaaagcagcctcctgcggcttcctg
ttggtccctgtgctggaggttcctttcgcactgacgtcttacctgtacggagatccactg
agagcccagctcttcatccctctaaacatccactgtctgctgaagaatggcagtgacaac
ctgttcgaaggttttgaaccagagacgtactgggagaggatgcagctctttcaggaggcc
atactgtacagattcggcttcgtgcacgacaagtattctgcttctgcttttaatttcccc
tctgagaacaagccccagtacatccacgtaacaggcaccgtgttcctgcagctgccatac
tccaagaggaagtactcgagcgggcagcagcgccggcgcagaaactccaccacctcgaac
agccaggggccattcggcggtgaggagcgggtcgggtactactgggcctacaacaccatg
ctgaccaaggcctggaggacgggcgtgctgggtgatgagaggctcgccgatcgcctgctc
agagatttcaccgacttctgcgtcaacaagaacaacagactgctcaacttctgggacagc
tgccaggagaaaatgaacgccagcgctccctga
DBGET
integrated database retrieval system
