Siniperca chuatsi (mandarin fish): 122886504
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Entry
122886504 CDS
T08948
Symbol
carmil3
Name
(RefSeq) capping protein, Arp2/3 and myosin-I linker protein 3 isoform X1
KO
K20493
leucine-rich repeat-containing protein 16
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
schu04131
]
122886504 (carmil3)
Membrane trafficking [BR:
schu04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
122886504 (carmil3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CARMIL_C
Carm_PH
LRR_6
Sec66
Motif
Other DBs
NCBI-GeneID:
122886504
NCBI-ProteinID:
XP_044074734
LinkDB
All DBs
Position
LG13:22952539..23029502
Genome browser
AA seq
1410 aa
AA seq
DB search
MASKETTAAGFVNVSREITESIRKVLDKQAIKFVRAIKQDTRSGKTEDRILVLATWRLYL
FAVKVPTKVEVTFNFLEIRAMNTYPEHQVVIDTDKTTYSLRLQTQDQLDHMVSHINYALS
RVFNNSIYAPPICRAEGDLTDGSHKFSPNSESSLDPQKTCGGFSETYAALCDYNGIGCKE
EVQWDVDTIYHSQDNREFNLLDFSHLDSRDLAVIVASIAYNTWFTKLYCKDMRIGSEVVD
QVLHTVSKSNSLEELTLENAGLKSDFPQKMASALSENPASVIHSLNLAHNTLDNQGVSNL
IQQVCRLNKGLRLLNLSKTSLSSKGVVSLSQALCSSDDYSNSLLHLDLSKNPGVLSGEDA
TNLYLFLAQPNCLVHLDLSGTDCTVDSLFGALLRGCCADLSYLNLSKNSFSHRKARDSLP
TFRQFFSSAFSLTHVSLASMKVPPDSLRALFLGLSNNPHITDLHLDISSCELRSAGAGVI
QELFPRVSCVGTLDISDNGLDADLLAVIPAFSRHPSLKHLMLGKNFNIKGRVLDEILQKL
VHLVQEEECALQSLSLSDSRLRQRGTVLVNALGSNTCLRKVDLSGNLLEDSGAKMLSKAL
QINTTLRSVTWDRNNTTATGFQDVARALEHNFTLQYMPLPLSDVTQAYRSAPEKTDQALT
KIQRALLRNNQTQRFSQKQALRLHQGLVTSTAEQVMERLCVRVQQQVCVLKGCEEEEEVQ
TARQILKEARDSRALYPSLCELAHVLSVDGPVKQRLDTLAGELAKAADKELQVVVDSMVS
LCRELCPMSCSAADRLSPPLSSISEQVSIPRSAIRNALMERAAEDINRALEEVKLSVVSY
LTNSIVDQILQELYTTHKTLVLLRQVSQAKRWDDVGTGRRTIRQSRIIESLEFPDEDLGV
NLGIDTMAIKKRSSRTRRIRPVSTRLSLGDEPSPSPTPSAPPHSAPLTHSASWECLSTLP
TNGSPLRHVTHVRPRPPRRHRAGHPPPESHCSENGGVNMLEDGLPDFYSKRVLPDSQLSS
LHQAQSLRRKKRRSVLSIFSGFRKNRNSTISNQDSDASENVYSMIQHPKDAGRPESTVPG
ANGTMPSPRPMQGVPVHLRAASPPCLIQRQSTDLVSMVYSCIGAEIEDSDGSSTCDIKET
DDTDRSTAVSDAPADTRTNGHVVSSKQQADRQMETGRQERIVALTDSRTEMEEDRQSGGG
GNVAPGGPRPEPPPQSTKPSLSAMRQRHLQESLEEAGRLEVQADQSERKREEKQRVRGPE
GQRPLIPNKPSLDLSRDKTSPEKAKTSPGEEPTNDQRSLPPAPPIILEEGATERKSPPAS
AKPGIEAADPVSQDEEEGRNGFPATSRHTRKSNSFDIGMERDSPYDLERSSDRRFPVKKP
YFPQYRNRSLDYPAGTRCCESPQLGNRDAL
NT seq
4233 nt
NT seq
+upstream
nt +downstream
nt
atggcctcaaaggagaccacagcggcgggttttgtcaacgtcagcagagaaatcacagag
agcatcaggaaggtgctggacaagcaggccattaagtttgtgcgagccatcaagcaggac
accaggagcggcaaaacagaggacaggattctggtcctggcaacatggagactgtatctc
tttgctgtcaaagtgcccaccaaggtggaggtcaccttcaacttcttggaaatccgagca
atgaacacctatccagagcaccaggttgtcatcgatacagacaagaccacctactcgctg
agactacagacccaggaccagctggatcacatggtcagccacatcaactacgccctctcc
cgagtcttcaacaactccatttatgcgcctcctatttgtcgagcagagggagacctgact
gatggaagtcacaagttttcaccaaactctgaatcgtcattagacccccagaaaacctgc
ggaggtttttcagagacctatgcagctctttgtgactacaacggaattggctgcaaagaa
gaagtgcagtgggatgttgacaccatctaccactctcaggacaacagggagtttaattta
ctggatttcagccatcttgacagcagggacttggcggtgatcgtggcatccattgcgtac
aacacctggttcaccaagctgtactgcaaagacatgcgcatagggtcggaggtggtggac
caggtcctgcacacagtcagcaagtccaacagtctggaggagctcactctggagaatgca
ggactcaaatcggattttccgcagaagatggcgtcagcactgtcagagaacccagcctct
gtgattcactctctaaacctggctcataacacgctagacaaccaaggagtctccaacctg
attcaacaagtgtgtcgcctcaacaagggactgcgcctcctcaatctctccaagacctct
ctttcctccaagggtgtggtttctctgtcccaggcgttgtgttcaagtgacgactactcc
aattctctgctgcatctggacctcagcaaaaaccctggggttttgtctggagaggatgcc
acaaacctgtacctgttcctggcccagcccaactgcctggtccatttggacctgtctggg
acagactgcaccgtggactcgctgtttggggccttgctgcgaggctgctgcgccgacctc
tcctacctgaacctgtccaagaactccttctctcacaggaaagcaagagattctctgcca
actttccgccagttcttcagctcagcattcagcctgacccatgtcagcctggcctctatg
aaagtccctcctgattcactgagggctctgttcctaggtctgtccaataaccctcatatc
actgatttacacctggacatcagcagctgtgagttgaggtcagcaggtgccggggtgatt
caggagctgtttcctcgagtgtcatgcgtggggactttagacatctctgataatggtttg
gatgctgacttgctggctgtcatcccagccttctccaggcacccctccctcaaacacctg
atgctggggaagaacttcaacatcaagggcagggtgctggatgaaattctgcagaaactg
gttcatctggtgcaggaggaagagtgtgccctacagtccctctcgctgtctgactcgagg
cttcgccagcggggcacggtgctggtcaacgctctgggctccaacacctgcctacggaag
gtagacctgagcggcaacctcctggaagactccggggccaagatgctcagcaaagccctg
cagatcaacacaacactcaggagtgtgacgtgggatcgcaacaacaccacagcgacaggc
ttccaagatgtggcgagagcgctggagcataactttacccttcagtacatgcccctcccc
ctcagtgatgtcactcaggcgtaccgcagcgccccagagaagacggaccaagccctgacc
aagatccaacgtgccctgcttaggaacaaccagactcagcgtttctctcagaaacaggct
ctcaggctgcaccaaggcctcgtcaccagcactgctgaacaggtgatggagcgtctgtgt
gtgcgggtgcagcagcaggtgtgtgtcctgaaaggctgtgaggaagaggaggaggtccag
acggcaagacaaatcctcaaagaagccagggactcgagagctctgtatccctctctgtgt
gagttggcccatgtgttgtcagtggacggccccgtcaaacagcgactggacactctggct
ggagaactggccaaggctgccgacaaagaactgcaggtggtagtggactctatggtgtct
ctgtgccgcgagttgtgtccaatgtcctgctcagccgccgacagactcagcccgcctctc
tcgtccatctccgaacaagtttcgatccctcgctccgccatccgcaacgccctcatggag
agagcggctgaggatattaaccgagccttagaggaggtgaagttgtctgtggtctcctat
ctgacaaactccatagtggatcagattctacaagagctctacaccactcataaaaccctg
gtactgctgcggcaggtgtctcaggcgaagcgttgggatgatgttgggacgggcagacgc
actatcagacagtccagaataatcgagtctctggaatttcccgatgaggacttgggcgtc
aacctgggaatagacacaatggctattaagaagcggagctccagaaccagaaggattcgt
cctgtctccaccagactgagtctaggtgatgagcccagtccctcgcctaccccctctgct
ccgcctcactctgcccctcttacccactcggcatcgtgggagtgtctgtccaccctcccc
accaacggctcacctttgcgtcacgtgactcacgtcagacctcgcccaccgcggaggcac
agagcagggcaccctcccccagagtctcattgctcggagaacggaggagtcaatatgctg
gaggatggactgcctgatttctacagcaagagagttctacccgacagccagctgtcatcc
ctccatcaggcccagtcactgaggagaaagaaaagacgcagcgtgttgtccattttctcc
ggcttccgcaagaaccgcaactccaccatctctaatcaggactcagacgcatcagagaac
gtctactcgatgatacagcaccctaaggacgctgggaggccagagagcactgttcctgga
gcaaacgggaccatgccttcacctcggcccatgcagggtgtacctgtgcatctgagggct
gccagccccccctgcctcatccaaagacagtccacagacctggtcagcatggtgtacagc
tgcatcggggcagaaatcgaggactcagatgggagcagcacctgtgacatcaaagagaca
gacgatactgacagatcgaccgccgtctcagatgccccagcagatactcggactaacggc
cacgtggtctcctccaagcaacaggcggacagacagatggagacaggcaggcaggagagg
atcgtggccctgacagactcacggactgagatggaggaggacaggcagagcggaggtggc
ggcaacgtggctcccggtgggccgaggccagagccacctccacagagcaccaagcccagt
ctgtctgccatgaggcagagacacctgcaggagagtttagaagaggcaggaaggctggaa
gtacaagcagaccagagtgaaagaaagcgtgaagagaagcagagagtgcgagggccagag
ggacagcgtcctcttatacccaataagcccagcctcgacctctcaagagacaagacctct
ccggaaaaggccaaaacctcaccaggtgaagaaccaaccaatgaccagaggagcttgcct
cctgctccgccaatcattctagaggagggggccactgagaggaaaagcccaccagcatct
gccaagcctgggatagaagcagcagatcctgtcagtcaagatgaggaagaaggtcgtaat
ggatttccagcaacatcacgtcacaccaggaagtccaactcatttgacataggcatggaa
cgggacagcccctacgatctggagaggtcttcagatcgcagattccctgtgaaaaagccc
tatttcccccagtacagaaacagatctctggactaccctgctgggaccaggtgttgtgaa
agtccccagcttggtaacagagacgcgttatga
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