Siniperca chuatsi (mandarin fish): 122886514
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Entry
122886514 CDS
T08948
Name
(RefSeq) nuclear factor 7, brain-like
KO
K12012
tripartite motif-containing protein 35
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
schu04121
]
122886514
Ubiquitin system [BR:
schu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
122886514
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-RING_UBOX
zf-B_box
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
U-box
zf-RING_5
zf-RING_6
zf-Nse
Prok-RING_4
zf-rbx1
PIN_8
Gp58
DUF4618
PEHE
Perilipin
Fib_alpha
AAA_11
zf-ANAPC11
Exonuc_VII_L
Motif
Other DBs
NCBI-GeneID:
122886514
NCBI-ProteinID:
XP_044074759
LinkDB
All DBs
Position
LG2:1161594..1163800
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AA seq
462 aa
AA seq
DB search
MASRSEEELCCPVCHDVFRDPVLLSCSHSFCKDCLKSWWREKPAHECPVCKRRSSREEPP
LNRALKNLCEAVLQDRDQRPSGALCSLHSEKLKLFCLDHQQPVCVVCRDSEKHSDHRFRP
IDEAARQHKKELQETLEPLKKKLQVSEQVKEEFGQTAEHLKVQARHTERQIKEQFKKLHQ
FLEEEEEARMAALREEEEQMSQMLKEKMEALSREIAALSDTVRATEEQLRAEDVSFLLNY
KAAVERVQQQPLLEDPQLPSGALIDQAKHLGNLTFNIWNKMKDMVSYTPVILDPNTAGPE
LILSEDLTSVRGGERQQLPDNPERFGSSWSVLGSEGFNSGTHSWEVEVGDSTGWSLGVLA
ESVQRKGDIRSGFWGIWFNEGKYSAWSPPAPSTALLVQKKLQRIRVNLDWNRGTLSFSDP
DTNTHIHTFRHTFTQRMFPYISTGAELQISAVKVCVTVEQSS
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggcttccagatcagaggaggaactctgctgtccggtctgtcatgacgtctttagagat
cctgttcttctgtcatgtagccacagcttctgtaaagactgtctgaagagctggtggaga
gagaaaccagcacacgagtgtccagtttgtaagagaaggtcttcaagagaagaaccacct
ttaaaccgggcgttaaagaacctgtgtgaggccgtcttacaggacagagatcagagacct
tcaggggctctctgcagtctgcactctgagaaactcaaactcttctgtctggaccatcag
cagccagtgtgtgtcgtctgcagagattcagaaaaacacagcgaccacagattcagaccc
atcgatgaagctgcacgacaacacaagaaggaacttcaggaaactctggagcccttaaag
aagaagttacaggtttctgaacaagttaaagaggagtttggtcaaacagcagaacacctg
aaggtccaggcccgacacacagagaggcagattaaggagcagtttaagaagcttcaccag
tttctagaagaggaagaggaggccaggatggctgcactgagggaggaagaggagcagatg
agtcagatgctgaaggagaagatggaggctctgagcagagagatagcagctctttcagac
acagtcagagccacagaggagcagctgagagctgaagacgtctcattcctgctcaactac
aaggctgcagtggaaagagtccagcagcaacccctgctggaggatccacagctgccctca
ggagctctgatagaccaggccaaacacctgggcaacctgaccttcaacatctggaacaag
atgaaggacatggtctcctacactcctgtgatcctggacccaaacactgctggtccagaa
ctcatcctgtctgaagatctgaccagtgtgagaggaggagagagacagcagcttcctgac
aatccagagaggtttggttcttcctggtctgtcctgggctctgagggcttcaactcaggg
actcacagctgggaggtcgaggttggagacagtacaggctggtcactgggtgtgttagca
gagtctgtccagaggaagggagacatacggtctggattctggggaatatggttcaatgaa
ggtaaatactcagcatggtcaccaccagctccatccactgctctcctagtgcagaagaag
ctccagaggatcagagtgaatctggactggaacagaggaacgctgtcgttctctgatcct
gatactaacacacacatacacaccttcaggcacactttcactcagaggatgtttccatac
attagcactggggctgaactgcagatatcagcagtgaaggtctgtgtgacagtggagcag
agcagttag
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