Siniperca chuatsi (mandarin fish): 122886523
Help
Entry
122886523 CDS
T08948
Name
(RefSeq) C-myc promoter-binding protein-like isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
schu04131
]
122886523
Membrane trafficking [BR:
schu04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
122886523
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
dDENN
uDENN
PPR_2
DUF2464
PPR_3
PPR_long
PPR
Motif
Other DBs
NCBI-GeneID:
122886523
NCBI-ProteinID:
XP_044074811
LinkDB
All DBs
Position
LG1:4756074..4843518
Genome browser
AA seq
2033 aa
AA seq
DB search
MMEDKGPRVADYFVVAGLTDPSKPLDQEIHFDDVCHKTAKPKAPITDVAVVIRSMGEEVP
PGFTCIEETPTGLSADLNNGGLMAPQIFLCYRRGRDKPPLTDLGVLYEMKERLKQGCHLI
QTTPSGRPANISGNSSQRIYVTYRRAPESQPHTALAVTDICIIIPSKGETPPHTFCKVEK
NLNSSMWGSSVYLCYKKSVAKTNTIAYKAGLFSRYPEEDYESFPLPESVPLFCLPMGATI
ECWPANTKYSLPVFSTFVLTGASGEKVYGAAIQFYETYPQECLTDQQRSQLGLLSPDPHK
PSSSNTTVTATNSTTNSTTTPRSVYTNKCICLLSHWPFFDAFRKFLTFLYRYSISGPHAL
PIEKHISHFMHKVPFPSSQRPRILVQLSPHDSLMLSQPVSSPLPLSGGRFSMLLQNLGPE
NAVTLLVFAVTEHKILVHSLRPAVLTSVTEALVSMIFPFHWPCPYIPLCPLALADVLSAP
CPFIVGVDSRYFDLYDPPPDVSCVDLDTNTIFHNEDKRALTWKILPKKACKNLMNVLSNL
YQQLVDGQYRPDGLLELSMSDSSELSCGKSLHMLELEIQEAFLRFMAAILKGYRSFLRPI
TQAPSEKATDASSLFDLQGFLKSRDRSHQKFYTLMTKTQMFIRFIEECSFVSDKDASLAF
FDDCVDKLYNSERGADKGSKVDSDRPEETRLIEIDESQRSEHTVFITPPELPPLPEGEEY
PLCYRYDGFPVLSLDLFDPVEGLRTPSSRLAARHSCPTSPAPMFRRTKQEIKSAQKIAKK
YSSIPQLWSKCLLRHCYGLWFICLPAYVKVCHSKVRALRTAYDVLRKMQAKKLQPPDEVC
YRVLMQLCGQYGQPVLAVRVLFEMKKAGVHPNAITYGYYNKAVLESTWPSSTRGGYFLWM
KLRNVVLGVAQFKRALRRHAPLTQSPLSDGSDLDAVSHGSLDSSADTNLAEQGPYATDSV
TVDPTDDRSSTGDQSDLGYNSLSKEEVRRGDPGAQDMAPDKDDKKESDCSSLSETESAKG
SKDCLPQLDMEVHSSFKSRGIVRSSCPYDDSSCKPKSSASTGHVAGLLFTFSLDEIGEVQ
TNSLLRRHKSALEEVVGSASSGSALDWQGVRSRRLSGDTVGSSSSGTTVLGLGMSQGETD
PDKIAEHLGADVKILSGANFNKKRPRSLALGGLEGAAAKAGAARSHDHREEKEEMERQDS
SDEDRSNTEAIFDLEDLDLDKPATKAGIGSHKTNKSHKIPVERSASYSGMSTETSRGAVK
RTGIETGYDPLSLLAAESQSEQENEDQYPEGDEASTPSARRHLAREIELYMNHMGSPLSS
RTPSLDLQDPASPLLLHPSSLSAPRRASLPHTSPLRTAGVTRSRTFHPPSPSQPISRQRL
WSSPPCRSSSTTPSPYSERTDRISLASPSPSSSSFALDTLLTPTLDVFKTSVFSAGKGVA
EKASRWYSRLATYTTPTKDGHSDRLSVSSLGAGDPDCSSLLDEEECGESERSEVSPQRNG
PAGPRRSPRRSPLRSRLDSPTAGSSLGRPTSLLPGCVLSPPGFPLPDKSDLGSSRYTSNT
SIFNNYAMELLISSCSRCKTCDCLVYDEEIMAGWTADDSNLNTTCPFCGNPFLPFLNVEI
RDMRGPGRLFLKGSPSVDEAMTSSYSASTGLDTGTSTLSTPCPTTAVFPPSPVIAVQECS
GSGRTRATRVQGINIPTDRRQGALSPGTPMARSVSAFGPLDEASRLNRCVPTSGSLPSRL
NETTDPLSMEWRLHNPEPVTVPYLSPLVLWKELESLLENEGDPVITEADMVDHHPIIYWN
LVWYFRRLDLPSNLPGLILTSEHCNRDSQVPRHWMSEDSKHVLIQILWDNLKLHQDQIQP
LYILWNTYRLNCTLLLENVGYPLSRPVSEEEKRFSEELLQSVVKSIQRNDVSRPMAQLLQ
LLGQTLGVKRQRSLYRDILFLSLVALGKDNIDIDAFDREYKLAYDRLMPSLVKLTHNCDR
PPSTGVMECRRTFGEPYLCQVVIKEATAFKCFKVSTWSTSGGYRCCWVFIFRL
NT seq
6102 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggacaaaggccctcgtgtagccgactactttgtggtggctggtctgacggat
ccgtccaagccgttggaccaggagatccactttgatgatgtctgccacaagacagccaag
cctaaggcgcccatcaccgatgtggcggtggtgattcgctcgatgggcgaggaggtgccg
ccagggttcacttgcatagaggaaacaccaaccggcctttcggctgatcttaacaatggc
ggcctcatggcgccccagatcttcctgtgctacaggcggggtcgtgacaagccaccactc
actgacctgggcgtgctgtatgagatgaaggagcgactgaagcagggctgccacctcatc
cagaccacaccctccggtcgtccagccaacatcagcggcaattcctcccagcggatctac
gtaacctaccgccgggcgcctgagagccagccgcacaccgccctggccgtcaccgacatc
tgcatcatcatcccgagcaagggagagacgcccccacacaccttctgcaaagtggagaag
aatctcaacagcagcatgtggggctcctctgtctacctgtgttataagaagtctgtggcc
aaaaccaacacaatagcctacaaagcaggtttattcagcagatatccagaggaggactat
gagtcattccctctgccagagtctgtccctctcttctgccttcctatgggggccacaatc
gaatgctggccagctaacaccaaatactccctccctgttttttccacctttgtcctcacc
ggagcctctggagagaaggtgtacggtgctgccattcagttctatgagacctacccgcaa
gagtgtctgactgatcagcagcgctcccagctgggtctcctgagcccagatccacacaaa
ccctcctcctccaacactacggtgacagccaccaacagcaccactaacagcaccaccacc
ccacgctcagtctacaccaacaagtgtatctgtctgctttcccactggcccttctttgac
gcttttcgcaagtttctcacattcctctatcgctactccatctccggtcctcatgccctg
cccatcgagaagcacatctctcatttcatgcacaaagttcccttcccttcctctcagagg
cctcgcatcctggtgcagctttcccctcatgacagcttgatgttgagccagccagtgtct
tctcctttaccactcagtggtggtcgattttccatgctgctccagaacctcggaccagaa
aacgccgtcaccttgctggtgtttgctgtcactgaacataagatcctggtccactcgtta
cgacccgccgtactgaccagcgtcactgaagctctggtgtctatgattttcccgttccac
tggccgtgcccgtatattcctctgtgccccctggcgttggctgacgtgttgagcgccccc
tgtccattcattgtaggagtggactcccgctactttgatctttatgaccccccaccagac
gtgagctgcgtggacctggacacaaacaccatcttccacaatgaagataagcgagccctc
acatggaagatcctgccaaagaaagcctgtaaaaacctaatgaatgtgctgagcaatctc
taccagcagctggttgacggtcagtaccgtcctgatgggctgctggagctgagcatgagt
gattcgtcagagctgagctgcgggaagagcctccacatgctggagctggagatccaggaa
gccttcctgcgcttcatggcagccattttgaaaggctaccgttcattcttacgacctatc
acccaggcaccttctgagaaagccacagacgctagctcgctttttgacttgcaagggttc
ttgaagagccgcgaccgctcacaccagaagttctacacgctgatgaccaaaacccagatg
tttatccgctttattgaggaatgctcctttgtcagcgacaaagacgccagtctggccttc
ttcgacgactgtgtggacaaactctacaattcagagcggggtgcagacaaaggaagcaag
gtggacagtgacaggccggaggagaccaggctgatagagattgatgaatcccagcgcagt
gagcacacagtctttatcacacctccagagctgcctcctctgcctgagggggaggaatat
ccactatgctacaggtacgatggtttcccagtgttaagtcttgacctgtttgaccctgtg
gagggcctgcggaccccttcctcccgcctcgctgccaggcacagctgtcccaccagccct
gcccccatgtttagacgtacaaagcaggagatcaaatcagcccagaagatagccaagaag
tactcgtccatcccccagttgtggtccaagtgcctgctccgtcactgctacggcctgtgg
ttcatctgtctgccagcatacgtgaaggtgtgccactccaaggtacgggcacttcgcacc
gcctacgatgtcctcaggaagatgcaggcaaagaaattgcagccccctgacgaggtctgc
taccgggtgctgatgcagctgtgcggacagtatggccagcctgtcctggcagtcagggtc
ctctttgagatgaagaaggctggagtccaccctaatgccatcacttacggctactataac
aaggcggtgttggagagcacgtggccctccagcaccagaggaggatacttcctgtggatg
aagctgagaaatgtcgttctgggcgtggcgcagttcaaacgggcgctgcggcgacacgct
cccctcacccagagccctctgtcagatggcagcgacctggacgctgtgagtcacggcagc
ctggatagctctgccgacactaacctggccgagcagggcccctacgccactgactccgtc
acagtagaccccactgatgatagatctagcacaggggatcagtcagatttgggttataac
tcactgtccaaagaggaggttcggagaggagaccccggcgcccaggacatggcccctgac
aaagatgacaagaaggagagcgactgcagctccttgtccgagacagagagcgccaaggga
agtaaagactgcctccctcagctggacatggaggtccattcctccttcaaatcccgtggc
attgttcgcagcagctgtccatacgacgattcatcctgtaaacccaagagctccgccagc
acaggccacgttgcaggtctcctcttcactttctccctggatgagatcggtgaggtccag
accaacagtttgctcaggagacataagagtgccctggaggaggtggtgggcagcgccagc
agcggctcagctcttgactggcagggcgtgaggagccgccggctgagcggcgacacggtg
ggcagcagcagcagtggcaccactgtcctcggcctgggtatgagccagggtgaaaccgac
ccagataagatcgcagaacatttgggcgcagatgtcaaaattctctctggtgccaacttc
aataagaagaggcctcggtcactggctctgggtggattagagggggcggctgctaaggca
ggcgctgccaggagtcatgatcacagggaggagaaagaggagatggagagacaggactcc
agtgatgaggacagaagtaatacagaggcaatttttgatttggaggatctggatttagac
aagcctgccacaaaggctggcatcggctctcacaaaaccaacaaatctcataagatacct
gtcgaacgcagcgccagctacagtggcatgagcaccgagacatccagaggagctgtcaag
cgcacaggcattgagacgggctacgaccctctatccctgctggcagcagagtcacagtcc
gagcaggaaaatgaggatcagtacccagagggggacgaggccagcacgccgagcgcccgt
aggcacctggccagggagatcgagctctacatgaaccacatgggcagcccgctgagcagc
cgtacacccagtctggacctgcaggaccctgccagccccctcctcctccacccctcctca
ctctctgccccccgcagagccagcctgccccacacctcccccctcaggactgctggagta
acgcgctcccgcaccttccacccaccctcgccctcccaacccatctcacgccaacgtcta
tggtcgtcaccgccctgtcgcagctctagcaccacccccagcccatacagtgagaggaca
gacaggataagcctggcgtcaccttcgccctcctcctcctcgttcgctctggacactctg
ctcacaccaacacttgatgtattcaagaccagtgtgttctctgctgggaagggcgtggca
gagaaggcaagccgctggtattcccgccttgccacatacaccacacctaccaaggacggt
catagtgaccgtctgagtgtgtcctccctcggtgctggggatccagactgctcctccctg
ctggatgaggaggaatgtggggagtcagagaggtccgaggtctctccacagaggaacggc
cctgcggggccccgcaggagccccagacgcagccccctccgcagcagactggatagcccc
actgcaggctccagccttgggagacccacatctctgctccctggatgtgtcctctcgcct
cctggcttccctctaccagacaagtcggacctcggctcttcacgctacaccagcaacacc
agcatcttcaacaactacgccatggagctgctgatctccagctgttctcgctgtaagacg
tgtgactgcctggtgtacgacgaggagatcatggctggctggacggcagacgactccaac
ctgaacaccacctgccccttctgtggaaaccccttcctgcccttcctcaacgtggagatc
agggacatgcgaggacccggcaggcttttcctgaagggcagcccgtcggtggatgaggcg
atgacctcgtcgtactcagcctccacaggtttggacacagggacctccaccttgtccacc
ccctgtcctacaacagctgtattccctccctcccctgtgattgctgtccaggagtgctcc
gggagtggaaggactcgagcaaccagggttcaaggtatcaacatccccacagaccgccgg
cagggggcgctgtcccccggcacgcccatggcccgcagcgtcagcgccttcggtcctctg
gacgaagcatcccgactcaaccgctgtgtgccgacgtcaggcagcctgcccagccgtctc
aatgaaaccactgacccgctgagtatggagtggcggctccacaaccccgagccggtgacg
gttccctacctgagcccgctggtgctgtggaaggaactggagagtctgctggagaacgag
ggcgacccggtgatcacagaggccgacatggtggaccatcatcccatcatctactggaac
ctggtctggtacttcaggcggctggacctgcccagcaatctgcccggtctcatcctcacc
tctgagcactgcaacagagactcccaggttcctcgtcactggatgtcagaggacagtaaa
cacgtgttgatccagatcctgtgggacaacctcaagctgcaccaggaccaaatccagcct
ctctacatcctctggaacacatacaggcttaattgtactctgttgttagagaatgtgggt
taccctctgtcccggccggtgtcggaggaggagaagcggttcagcgaggagttactgcag
agtgtggtgaagagcatccagaggaacgacgtcagccggccgatggctcagctgctgcag
ctgctgggccagacgctcggggtcaaacggcagaggagtttgtacagggacatcctcttc
ctctccctggtggctctgggaaaagataacattgatattgacgcctttgatcgtgagtac
aagttggcgtacgaccgcctcatgccgagcctggtgaagctgacccataactgtgaccgc
cctcccagcacgggggtcatggagtgccgcaggacgtttggagagccttacctctgtcaa
gttgtaattaaagaagcgactgcattcaagtgcttcaaagtctcaacatggagcacgtca
ggaggatacagatgctgttgggtctttattttcaggctgtga
DBGET
integrated database retrieval system
