Siniperca chuatsi (mandarin fish): 122886571
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Entry
122886571 CDS
T08948
Name
(RefSeq) polypyrimidine tract-binding protein 2-like isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
schu03041
]
122886571
Spliceosome [BR:
schu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
122886571
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_PARP14_3
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
122886571
NCBI-ProteinID:
XP_044074850
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All DBs
Position
LG13:27668051..27700807
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AA seq
523 aa
AA seq
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MDGDVAVGVKRGSDELSMYGSSPNSMTANGSDSKKQRLDESPPSRVLHIRKLPNEVSETE
VIALGLPFGKVTNILMLKGKNQAFLELGTEEAAITMVNYYTAVTPQVRNTPVFIQYSNHK
ELKTDSALNQRAQAVLQAVSAVQDGSSPSSDPGVLDLAPPPSPVLRIIIDNMFYPVTLDV
LQQIFSKFGTVMKIITFTKNNQFQALLQFSDPVNAQQAKLSLDGQNIYNSCCTLRIDFSK
LVNLNVKYNNDKSRDYTRPDLPTGDGESANKDHSLLGTPSGALASYSSGGGYSSSLSLSQ
GGGAISPLSAAAAAAAAAGRVALSGSGVSGVLLASNLNEEMVTPQSLFTLFGVYGDVQRV
KILYNKKDSALIQLSDGNQAQLAMSHLNGQKVFGKVMRVTLSKHQTVALPREGLDDQLLT
KDFSGSPLHRFKKPGSKNFQNIFPPSATLHLSNIRDGVGEDDLRLLFSNSGGAVKAFKFF
QDRKMSLIQMSSVEEAIQALMDLHNYDMGGNHHLKVSFSKSTI
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggacggtgatgttgcggttggtgtgaagagaggctcagatgagctcagcatgtacggt
agcagccccaactctatgactgcgaacggcagtgatagtaagaaacagcgtctggatgaa
tcccctccctccagagttctccacatcaggaaacttcccaatgaagtgtcagagactgaa
gtcattgctctggggctgccctttggaaaggtcactaatatactgatgctgaaggggaaa
aaccaggcatttctggagttgggtacagaggaagcagccattactatggtgaactactac
acagctgtcacaccacaggtcagaaacactcctgtcttcatccagtactccaaccataag
gaactgaaaacagactcagctctgaaccagagagcccaggcagtgttgcaggcagtgtca
gcagttcaggatggaagctctccgtcctctgacccaggagttttggacctagctccaccc
cccagccctgtcctgagaattatcattgacaacatgttttatcctgtgacactggatgtt
ctacaacagatcttcagtaagtttgggactgtgatgaagattataactttcaccaagaac
aaccagtttcaggctcttctgcagttcagcgaccccgtcaatgcacagcaagctaaactg
tctttggatggacagaacatctataattcatgctgtactctgcggatagacttcagtaaa
ctggtcaacctcaacgtcaaatacaacaatgataagagtcgagattacaccagacctgac
cttcctactggagacggagagtcagccaacaaggatcattctttgttgggtaccccatct
ggagcgctagcatcctactctagtggaggaggttattcatcttctctgtccctctcgcag
ggtggaggagccattagccctctgagtgctgcagcggcggcggcggcggctgctggtcgt
gttgctctgtctgggtctggagtgtcaggagtcctgttggcatccaacctaaatgaagag
atggtcacgcctcaaagtctctttaccctcttcggagtctatggtgatgtccagagggtg
aagatcctctacaacaaaaaggacagcgctctgatacagttgtccgatggcaaccaagct
cagctggctatgagccacttgaatggtcaaaaggtgtttggtaaagtgatgagagtgaca
ctgtcaaaacatcaaactgtggcattgcccagagaaggattggatgaccaactactaact
aaagatttttctggctcgccactccatcgctttaagaagccaggatccaaaaacttccag
aacatctttcctccctctgcaacacttcacctttccaatatccgggatggagttggagag
gatgatctacgtcttctgttctctaacagtggaggagccgtcaaagccttcaaattcttc
caggaccgtaagatgtccttgatccagatgtcgtcagtagaggaagcgatccaggctctg
atggatcttcacaactatgacatgggagggaatcaccatctgaaagtttccttttcaaag
tccaccatctaa
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