Siniperca chuatsi (mandarin fish): 122886596
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Entry
122886596 CDS
T08948
Name
(RefSeq) protocadherin-8-like
KO
K16499
protocadherin delta 2
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
schu04515
]
122886596
Cell adhesion molecules [BR:
schu04515
]
Cadherins
Protocadherins
122886596
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
TMEM154
Motif
Other DBs
NCBI-GeneID:
122886596
NCBI-ProteinID:
XP_044074918
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All DBs
Position
LG13:complement(22036375..22040470)
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AA seq
1011 aa
AA seq
DB search
MGGTGWNGLLVLACVSLASLAAVTQGKTVKYQTFEEDAPGTVIGNLAKDISSTPSSSGGS
RTNFRMMKQFNSSFIRLRESDGQLTIGERIDRERICKHTLHCLIAFDVVSFSKEQFKLIH
VEVEVKDINDNSPEFPRKESSLEISENTAVGTRIPLDFAVDDDVGVNYIQSYQISVNSHF
SIDVLSRADGVKYAELVLMKELDRETQASYALELVAMDGGNPSRTGTTRINVKVKDYNDN
SPVFDRNSFSVDLPEDAPVGSLLLDLNAEDPDEGLNGEVVYGFGNQVPTEIRQLFRVDRK
TGRLTLESPIDFESKNTYEFDVQATDLGPNPSPAICKIVVQVQDVNDNAPEISITPMTSI
TAGIAYITEAAARESFVALVSTSDRDSGANGQVHCTLYGHDHFRLQQAYEDSFMIVSTSP
LDREKIPEYNLTVVAEDLGSPPFRTITQYTIRLTDENDNAPVFSKPVYEVAVVENNAPGA
YITTVVARDMDMGSNGKVSYKLADTYFMGSPISTFVSLDPASGSLYALRSFNYEVMKQLE
LRITASDGGSPPLSGSANVYVRIVDQNDNAPVITQPALNNGSAEVLLPRDSPTGYVITRV
EARDADEGVNSELSYGLATGEPSVFSVNKATGEIYLNQVLSHDVDETLSVTVTVSDNGRP
GLTSTATLHFLIIAGSPPSDRTVYQSGSGDEVHAQWDLSVVIIVVLAGSCTLLLLAIILI
ATTCNRRKRDKSGEDSDSYGEKGTLERGRNHVVDNPLLPLHGSGGGTGFDGHSYSSQTGG
FTSAHPGGSDMCSASEDGSEVPCVYDSDSNSKLRGNKHEGYSTLPGYGNGKEAVRPITIW
KGNSYTTISARDPAFSGKDSGKGDSDFNDSDSDVSGDTGLKKDGAVVPPIGGQNGLWACT
SECKVLGHSDRCWSPSAVRANAAPSPAPTLSSFSNLSKTASLPRDPHRRDNYYQAQIPKT
VGLQSVYEKVLHREYDYVLVTPPRPVRVQEISDITIPVYTPTPTHCPNNDV
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atgggaggaacagggtggaacgggctgctggtgctagcgtgcgtctctttggcaagcctg
gctgctgtcacacaaggaaagacggtgaaatatcagacatttgaggaagacgcaccaggg
acagtgattggaaacttggccaaggacatctcctccaccccgtcttcctcggggggctcc
aggaccaatttcaggatgatgaaacagttcaactcctctttcatccgtctgagggagagc
gacgggcagctgaccataggagagaggatagacagggagcggatctgcaaacacaccctg
cactgcctcatcgctttcgacgtggtcagcttctccaaagagcagttcaaactcatccac
gtcgaggtggaggtcaaggacatcaacgacaactcccccgagttcccccggaaagagtcg
agtctggagatctccgagaacacagcggtgggcacgcggatcccgctggactttgccgtg
gatgacgatgttggggtgaactacatccaaagctaccagatctccgtcaacagccacttt
tcaatcgacgtgctcagcagggccgacggggttaaatatgcggagctggtgctgatgaag
gagctggaccgggagacgcaggcttcttacgcgctggagctggtcgctatggacggtggc
aacccgtcccgcaccggaacaacgcgcatcaacgtcaaggtgaaagactataatgacaac
agcccggtgttcgacaggaacagcttctccgtggacctgcccgaggacgcaccggtgggc
tccctcttgctggacctgaacgcggaggacccggacgaggggctgaatggcgaggtggtg
tacgggttcggtaaccaggtgcccacagaaatacgccaactcttcagagtggacaggaag
accggacggctcaccctggagagcccgattgactttgaaagtaagaacacgtacgagttt
gacgtccaggccaccgacctgggtccgaacccgagcccggccatctgcaaaattgtagtg
caggtgcaggacgttaacgacaacgcaccggagatctccatcacccccatgacgtccatc
acggcagggatagcgtacatcaccgaggcggcggccagagagagtttcgtggctctggtc
agcacctcggacagagactccggcgctaacgggcaggtgcactgcacgctctacggacac
gatcacttcagactgcagcaggcgtacgaggacagcttcatgattgtgagtaccagcccg
ttggaccgggagaaaatccccgaatataacctcacagtggtggcggaggatctgggctct
cctcccttcaggaccatcactcagtacacaatcagactgacagacgagaacgacaacgct
ccggtgttcagtaaaccggtgtatgaggtggccgtggtggagaacaacgcacctggcgca
tacatcaccaccgtggtggcgcgcgacatggacatggggtcaaacgggaaggtcagctac
aaactggcggacacatacttcatgggctcccccatttccaccttcgtgtcattggacccc
gccagtgggtcgctttacgcgctccggagcttcaactatgaggtgatgaaacagctggag
ctccgcatcacggccagcgacggcggctccccgcccctgtccggcagcgcgaatgtctat
gtgaggatagtggaccagaatgataacgcaccggtcatcactcagccggctctcaataac
ggctccgctgaagtcctcctgccccgagactcaccgaccggctacgtcatcacccgggtg
gaggcgcgggatgcggatgagggcgtgaactcggagctgtcctacgggctggccaccggt
gaaccctccgtgttctctgttaacaaagccaccggagagatctacctcaaccaggtgctc
agccacgacgtggacgaaaccctgagcgtgaccgtgacggtgagtgacaacgggaggccc
gggctcacctccaccgccacgctccacttcctcatcatcgcgggctccccgccgagcgac
aggacagtgtaccagtcaggcagcggggacgaggtgcacgcgcagtgggacctgtcggtg
gtgattatcgttgtcctggcggggagctgcacgctcctgctgctcgccatcatcctcatc
gccaccacctgcaaccggcgcaagcgggacaaaagcggagaggacagcgactcgtacggg
gagaagggcacgctggagcggggcaggaaccacgtggtggacaacccgctcttgcctctc
cacggatccgggggaggaacgggctttgacggacactcctacagcagccagaccggtggg
ttcacctcggctcaccccgggggcagcgacatgtgctcggcctcagaggacggcagcgag
gtgccctgtgtgtatgactcagacagcaacagcaagctccgagggaataaacacgagggc
tactccacgctgcctggctatgggaacggcaaagaggccgtgaggcccatcactatctgg
aaggggaactcttacaccaccatctctgccagggacccggccttcagtggcaaagacagt
ggcaagggggacagtgacttcaatgacagtgacagtgatgtcagtggagacactggtctg
aagaaagacggggcagtggttcctcccataggcggccaaaatggtctgtgggcttgcacc
agcgaatgtaaggtcctgggtcactcagatcgctgctggagcccctcagcagtaagagcc
aacgcagcgccctctccggccccgaccctctcttccttcagcaacctctccaagacggcc
tccctgccccgggacccccaccgtcgagacaactactaccaggcccagatccccaaaacc
gtggggctgcagagcgtgtacgagaaggtgctgcacagagagtacgactacgtcctggtc
accccacccaggcctgtgagggtgcaggagatcagtgatataaccatccctgtttacacc
cccaccccaacacactgtcccaacaatgacgtctaa
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