Siniperca chuatsi (mandarin fish): 122886784
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Entry
122886784 CDS
T08948
Symbol
acin1a
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu03013
Nucleocytoplasmic transport
schu03015
mRNA surveillance pathway
schu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122886784 (acin1a)
09122 Translation
03013 Nucleocytoplasmic transport
122886784 (acin1a)
03015 mRNA surveillance pathway
122886784 (acin1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
schu03019
]
122886784 (acin1a)
03041 Spliceosome [BR:
schu03041
]
122886784 (acin1a)
Messenger RNA biogenesis [BR:
schu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
122886784 (acin1a)
Spliceosome [BR:
schu03041
]
Complex C
Other components
EJC/TREX
122886784 (acin1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
Motif
Other DBs
NCBI-GeneID:
122886784
NCBI-ProteinID:
XP_044075328
LinkDB
All DBs
Position
LG13:complement(22635190..22660993)
Genome browser
AA seq
1845 aa
AA seq
DB search
MADLEDVTLDGRPLQSLRVADLKAALEERGLSKSGQKNALIKRLKGALMLENLQRTSTAH
VGLQPNSQIGEEMSQNSFIKQYLAKQQELLRQRLEREAREAYETNEEEDHAEVNNSTSCP
PQAQDVTPAVAEQHKPPGPSGGEGLFGAVNEGEGDRNQEADMSGPPASGSVAMRVPGGEQ
RPERGSVSNEVAADSDDEDSEDGEEDGDDDDWDSGARRRSLREPARVPTTRERSGASCQP
QQQHMPSLLSPQLRQPTPPPSPPPELSFPLPDTPKQSPPSPDVAPARRSPSTSSSGSSSS
GSRSSSPEPQRSGHAERKPGPLTLLARKMASEGAFSGAGWHGGNGEGNRQDSSSPSATSI
PGRGHPEGLVSAITHTANTGHVPFPMIPGTNQSVTGAHSANIQVPVSVLKATATEERESE
IEREKVLDLERQEKQRKVEQERAMEEERERALALETEERERALEKEKIERQQALEREERE
KALQRERELALERERQERELALAKEREEREQALAQERALELERQKELERQKELERQKELE
RQKELERQKELERQRALELERQREIERQRALEQERLQREKEEREKREREEMERAMELERA
KALEQERKERERALEEERLERERALEAERKEKERVEREKALEQERLERERLEREKALEQE
RIEREKALEQERLERERALEQERLERERALEQERLEREKAIERERIEREKALEQEKLERE
RALEQERLELEKKEKERIEREKALELKRIEREKALEREREEKERVEREAALKQERMEKER
AEKERKERLEREKALEQEKLERERALEQERKEKERALERERLEKEKAMQKEKEEQERALE
QEKERARMAEKERESHLPPFKRGREIGLTPLSTPPPLSTGPVKKSSTEAGELEDVHAPMS
RSEAAESGASMSPTPLSPQSSFKKFRFIRDSPIQPQSSSTSMVIKQPRNFSNTPQPQASP
VSSLANVGERQQEGHQPSTEQEVPQMRTKQEVVAMPMGNVGIQPENETTVSTTLVQSPKK
EGATSHVSENKEKADSLKTERAAMESTKKAKEVDKSKGLLDAAQQRGRDAKKEEKQARQR
SSSNDSSSSESDSGSSSSRSSGSSTSSQEKTCSTSRGRREGKPERDSSPQHRAKLEAQTD
CLKETPKASPCKREMSVEKSNTTADGDSHTKKPFIKAPTREETQRKRKDSEGEEEKDKQR
QVKEIAMAESEKLPETSEETPKAFSARKISLSSSKLSPGTGSVEGEQEFGAAAGRKRRWG
SSTAVTAKKPSISITTDSLKSLIPDIRPCLGQEAVVDLHPEEAVLSGAEDEERERSDQDL
QIRRTVTQVVHSESQENGQKGPKRSRHEDLEEDDLQGDRERTREHEEKMDTSFPGAIETQ
SPSHTSHDVDINTVTPSDTLIRRSISQQKTGVSITIDDPVRTARQPSPPRGKVSSIVHIS
NLVRPFTLGQLKELLGRTGTLVEEGFWIDKIKSHCYVTYCSCEEAVATRAALHGVKWPQS
NPKVLSVDFCQQDELDFHKGLGTADRPGAEEQGPGRGRTSGLPSLLPERDQWAEREREME
RRERTRAEREWDRDKVREFGKPGEEKEGGPRRSRSRERRRKERGKSKEKKTEKKEKTAED
PPAKLLDDLFRKTKAAPCIYWLPLSEEQFVQREAARAERMKEREKRRKEQEEEEEKKREE
ERKERMKAGAGTAGERSEGEKDKTRTRTERETETEVETETETGRERGRGRGRTTNAGMAT
VGRGAAGQAGVGAPAAAVIHEKGGVNGRSTDGTVLETTLFHLPFTTCTLLQLRPNRGPTD
VVTISQIVTFFKAHLHLHTVKLKGDHDFFCSVVSQSAVRLAPVEV
NT seq
5538 nt
NT seq
+upstream
nt +downstream
nt
atggcggatctcgaagacgttaccctggacgggagaccgctccagtcccttcgagtagca
gatttgaaagctgctcttgaggagagaggactctcgaaaagcggacagaagaatgctctc
attaaaagacttaagggggctctcatgctggagaatctgcagaggacctccaccgctcac
gttggactgcagccaaactcacagattggtgaggaaatgagccagaacagctttatcaag
cagtatctggctaaacaacaggagctcctgaggcagcgcctagagagagaggcccgcgaa
gcatatgaaacaaatgaggaagaggaccacgcagaagttaataacagtacctcatgccct
ccccaagcccaggatgtcacaccagcagtggctgagcagcacaagccacctggcccctct
ggtggagagggattgtttggtgcagtgaatgagggagagggtgacaggaaccaggaggct
gacatgtctggtcctcctgcttctggctctgtggctatgcgtgttcctggtggtgagcag
cggccagagaggggttctgtgtccaacgaagtcgccgctgacagcgacgatgaggatagc
gaggatggcgaggaggatggtgacgatgacgattgggacagtggtgctcggaggagaagc
ctcagagagccagccagagtgcccacgaccagagaaaggtctggagcatcctgtcaaccc
cagcagcaacacatgccttcccttttgtcccctcaactccgccagccaacacctcctccc
tccccgcctccagagttatcattccccttgcctgacacccctaagcagagcccacctagt
ccagatgtagccccagctaggcgctcacccagtacctccagctctggttcctccagcagc
ggcagccgcagtagcagcccagagccacagagaagtggacacgcagagcgcaagcctggc
ccgctgacccttctggcacgtaagatggcgtcagaaggtgctttctcgggagcaggttgg
cacggtggtaatggggaaggcaacaggcaagacagcagttcaccttcagctacatcaata
cctggcagaggacatccagagggtctggtatctgccatcactcacacagccaacactggc
catgtgccatttcccatgattccaggcaccaaccagagtgtcacaggagcacattcggcc
aatattcaagtacctgtgagtgtgctcaaggccactgcaacagaagagagggaatctgag
atagaaagagaaaaggtccttgatctggaaaggcaagagaagcagagaaaagttgagcaa
gaacgagcaatggaggaagagcgggaaagagctcttgcactcgagacagaggaaagagag
agagctctggagaaagagaaaattgaacgacagcaggccttagaaagagaagaacgagaa
aaggctttgcagcgggagagggaacttgctctagaacgagagaggcaggagagggaacta
gctttggctaaagagagggaagagcgagagcaagccttagcacaagagagggccctggag
ctcgagaggcagaaagagctcgagaggcagaaagagctcgagaggcagaaagagctcgag
aggcagaaagagctcgaaagacagaaagagctcgaaagacagagggccctggagcttgag
aggcagagagagattgaaagacagagagccctggagcaagaacgtctgcagagagaaaaa
gaggagagggagaagcgagagagagaagaaatggagagagcgatggagctagaaagagcc
aaggctttggagcaggaaaggaaggagagagagagggctcttgaggaagagaggttagag
agggaaagagctctggaggctgagagaaaggagaaggagagggttgagagagaaaaggct
ttggagcaggaaaggttggaaagggaaaggttagagagggagaaagccttagagcaagag
agaatagagagagagaaagccctggagcaagagagactagaaagggagagagccctagag
caagagagactagaaagggagagagccctagagcaagagagactagagagagagaaagcc
atagagcgagagagaattgagagagagaaagctctagagcaagaaaagttggagagggag
agagccctagaacaggagaggttagagcttgagaagaaggaaaaggagagaattgagaga
gagaaagcattggagctaaagaggatagagagggaaaaggccttggaacgagagagggag
gaaaaagagagggtggagagagaggcagctctgaaacaagagaggatggaaaaggaaaga
gccgagaaggagaggaaagagagactggagagggagaaagctctagagcaggagaaactt
gaaagggagagagccttggaacaggagaggaaggagaaggagagggctctcgaacgtgaa
aggttagagaaggagaaagccatgcagaaagaaaaggaggagcaagagagggccctggaa
caggaaaaagagagagctaggatggctgaaaaggaaagggagagtcacctccctccattc
aaacgtggccgtgagattggtctcacccccctgtccactcctccccccctctctacagga
ccagttaaaaagtcatcgactgaggcaggagagcttgaagatgtccatgctccaatgtcc
cggagtgaagcagcagaatctggtgcatccatgtcaccaacacctctgtcgcctcagtcc
tcattcaagaagttccggttcataagggactcgccaattcagccccaatcttcctccact
tccatggttatcaagcagccccgtaacttctctaataccccccagcctcaggcctcacct
gtctcctccctcgccaatgtcggggaacgacagcaggaaggacaccagccctccactgaa
caggaagttccacagatgcggacaaaacaagaggttgttgctatgccgatgggaaatgtg
gggatccagcctgagaacgagaccactgttagtaccacactggtccagagtcccaaaaaa
gaaggggccacaagccacgtatcggagaacaaagaaaaagcagattcattgaagacagaa
cgggctgccatggaatccaccaaaaaagcaaaagaagtagataaaagcaagggtttgttg
gatgctgcacagcagaggggaagagatgcaaagaaggaagaaaaacaagcaagacaaaga
tcatcgtctaatgattcctcttcctcagaatcggactctgggtcctcatcatctcgatct
tctggctcatccacatcttctcaagagaaaacctgctccacttcaagaggtagaagggaa
gggaaacctgaaagagattcttcaccacagcacagggcgaaactagaggctcagactgac
tgtttaaaagaaactccaaaagcctccccttgcaaaagagagatgtctgtagagaagagt
aacacaactgctgatggagacagtcacaccaagaaaccgtttattaaagcaccaaccaga
gaggagacacaaaggaagagaaaggacagcgagggagaggaggaaaaggacaaacaaagg
caggtgaaggagattgccatggcagagtcagagaagcttccagagaccagtgaggagaca
ccaaaggccttctcagctcgtaagatctctcttagcagcagtaaattatccccaggcact
ggcagtgtagagggcgagcaggagtttggggccgcagccggtcgcaagaggaggtggggc
tccagcacagctgtcactgccaagaaaccttccatcagcatcaccacagattcactcaag
tctctgatcccagacattcggccgtgtctcggccaggaggcagtagtggacctgcacccg
gaggaagccgtcctttctggggctgaggatgaagagagggagcgctctgaccaggacctt
cagatccgacgcactgtcacacaggtggtgcactcggagagccaggagaatggacagaaa
gggccaaagaggagcagacatgaagatttggaggaggatgacctgcagggagacagagag
aggacaagggagcatgaagagaagatggacacctcatttcctggagccatcgaaacccag
tctccatcacatactagccatgatgtagacatcaacactgtgacccccagcgacaccctc
attcgtcgctccatcagccagcagaaaacaggtgtttccatcacaatcgatgaccctgtt
cgcacggcccggcagccctcgccacctcgtggcaaagtctccagcattgttcacatcagc
aacctggtgaggccgttcactcttgggcagcttaaggagctgcttggcagaactggaacc
ctggtggaggagggcttctggattgacaaaatcaagtctcactgctacgtcacttactgt
agctgtgaggaggcagtggctacacgggcagctcttcatggagtgaaatggcctcagagc
aatccaaaagtccttagcgtagacttctgccagcaggatgagctggacttccacaaaggc
ttgggtacagctgacagacccggagcagaggaacaggggcccggccgtggtcgaacatcg
ggcctgccctctctcctcccagagcgagaccagtgggccgagcgtgagcgtgagatggag
cgccgggagaggactcgcgcagagcgggagtgggatcgcgacaaagtcagagagtttggt
aaacctggagaagagaaggagggaggtccccggaggtcacgctccagagagagacgacgc
aaggagaggggaaagagcaaggagaagaagactgagaagaaagagaaaacggctgaggat
ccccctgcaaagctgcttgatgatctgttccgcaaaactaaagcagctccttgcatatac
tggcttccactttcagaggaacagtttgttcagcgggaagctgccagagcagaacggatg
aaagagcgtgagaaacggaggaaggagcaagaggaggaggaggagaaaaaaagggaagag
gagcgcaaggagcggatgaaagccggagccggcacagcaggagagcggagtgagggtgag
aaggacaagacaaggacaaggacagagagagagacagagaccgaggtagagacagagaca
gagacagggagagagagagggagagggagagggagaacgacaaacgcagggatggctacc
gtaggccggggggcagcggggcaggcgggggtcggcgctcccgcagccgcagtgatccac
gagaaaggcggcgttaatggccgatcgactgatggaactgtcctagagaccaccctcttc
catttgcctttcactacatgtactttgttacaactaagacccaacagaggaccaactgat
gtcgtcaccatctctcaaattgtcaccttttttaaagcacatctacacctacacacagtc
aagcttaaaggggaccatgattttttttgcagtgttgtttcccagagtgctgtacgtctt
gctcctgtcgaggtttga
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integrated database retrieval system
