Siniperca chuatsi (mandarin fish): 122886818
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Entry
122886818 CDS
T08948
Symbol
copb2
Name
(RefSeq) coatomer subunit beta'
KO
K17302
coatomer subunit beta'
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
schu04131
]
122886818 (copb2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
schu04147
]
122886818 (copb2)
Membrane trafficking [BR:
schu04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
122886818 (copb2)
Exosome [BR:
schu04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
122886818 (copb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_WDR75_1st
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
NBCH_WD40
ANAPC4_WD40
Beta-prop_HPS5
PEP5_VPS11_N
Beta-prop_SPT8
Beta-prop_SCAP
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_DCAF4
Beta-prop_IFT122_1st
WD40_RFWD3
Beta-prop_LRRK2
Beta-prop_WDR19_1st
Beta-prop_Vps41
Beta-prop_WDR35_TULP_N
Ribosomal_60s
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
122886818
NCBI-ProteinID:
XP_044075458
LinkDB
All DBs
Position
LG13:complement(18388901..18396708)
Genome browser
AA seq
936 aa
AA seq
DB search
MPLRLDIKRRLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPV
RASKFVARKNWVITGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPYILTSSDD
MLIKLWDWEKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFT
LEGHEKGVNCIDYYSGGDKPYLISGADDRQVKIWDYQNKTCVQTLEGHAQNVSCVSFHPE
LPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVCGLRGSNNVALGYDEGSIIIKVG
REEPAMSMDTNGKIIWAKHSEVQQANLKAMGDAEIKDGERLPLAVKDMGSCEIYPQTIQH
NPNGRFVVVCGDGEYIIYTAMALRNKSFGSAQEFVWAHDSSEYAIRESSSIVKIFKNFKE
KKSFKPDFGAEGIYGGFLLGVRSVNGLAFYDWENTELIRRIEIQPKHIFWSDSGELVCIA
TEESFFILRYMSDKVAASQENNEGVTEDGIEDAFEVQGEIQEIVKTGLWVGDCFIYTSSV
NRLNYYVGGEIVTIAHLDRTMYLLGYIPKDDRLYLGDKELNIVSYSLLVSVLEYQTAVMR
RDFGMADKVLPTIPKEQRTRVAHFLEKQGFKQQALAVSTDPEHRFELALQLGELKIAYQL
AVEAESEQKWKQLAELAISKCQFGLAQECLHHAQDYGGLLLLATASGNATMVGKLAEGAE
RDGKNNVAFMTYFLQGKLDQCLELLIRTNRLPEAAFLARTYLPSQVSRVVKLWRENLAKV
NQKAAESLADPTEYENLFPGLKEAFAAEHYLRETCLGTTRPAKDYPLVTLNEDRNILEEA
QGYEPKGTFIPLASKTQDSEESVAAAPVAAAAVRSSAAPTAVEKEEEEEEEEEEIPEFSQ
SQKDKTLDELEVDLDNMELDDIDTTDVNLDDDFLDD
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgaggctggacatcaagcggaggctgacagccaggtcagaccgagtgaagagt
gtggaccttcatccaactgagccatggatgctggccagtctgtacaacggcagtgtctgc
gtgtggaaccacgaaacacagactctggtcaagacttttgaagtatgtgacctccctgtc
agagcttcaaagtttgtggcaaggaagaactgggtcatcactggagcagatgacatgcag
atccgtgtgttcaattacaacaccttggagcgggtccacatgtttgaggcccactctgac
tacatccgttgcatcgctgtccatccaactcagccctacatcctcaccagcagtgatgac
atgttgatcaagctatgggactgggagaagaagtggtcgtgcagccaggtgtttgagggt
cacactcactatgtcatgcagattgtcatcaaccccaaggacaacaaccagtttgccagt
gcctccctggacaggactattaaggtttggcagctaggctcttcgtctcccaatttcact
ttggagggccacgagaaaggagtcaattgtattgactactacagtggaggagacaagccc
tacctcatctcaggggctgatgaccgccaagtcaagatctgggactaccagaataagacc
tgtgttcagactctggagggccacgcccagaacgtctcttgtgtcagcttccacccagag
ctccccatcatcatcactggatcagaagacggtacggtgcgtatctggcactcaagcact
taccgcttggagagcactctgaactatggcatggagagagtgtggtgtgtgtgcggcctc
cggggctccaacaatgtggcgctgggctatgacgaaggcagtatcattataaaggtgggt
cgggaggagccggccatgtctatggacactaatggaaaaatcatctgggctaaacatagt
gaagtacagcaagccaacctgaaggccatgggtgacgctgagatcaaggacggagaaagg
ctgccattggctgtcaaagacatgggcagctgtgagatttacccccaaaccatccagcat
aaccctaatggaaggtttgttgtggtgtgcggagatggagagtatatcatctatactgca
atggctttgaggaacaagagcttcggctcagcacaggagtttgtctgggcacatgactca
tctgaatatgccatcagagaaagcagcagtatcgttaaaatcttcaaaaatttcaaagaa
aagaagtcctttaagcctgactttggagctgaagggatctatggaggtttcttgcttggg
gtgaggtcagtgaatggcctggcgttttatgactgggagaacacagagctgatccgccgg
atcgagatccagcccaaacatatcttctggtcagactctggtgagctggtctgcattgct
acagaggagtccttcttcattctgcgttatatgtcagataaagtagctgcttctcaagag
aacaatgaaggagtgacagaggatggtattgaagatgccttcgaggtccagggagagatc
caggagattgtgaagactggactctgggtaggagactgcttcatctacaccagctctgtg
aacagactcaactactatgtaggaggagagatcgtcactattgctcacctggacagaacc
atgtacctgctgggttacataccaaaagatgaccgtctgtacctgggggacaaggagctc
aacattgtcagctactccctgctggtctccgtcctggagtaccagactgccgtaatgagg
agggactttggaatggctgataaggtcctacccacaattcctaaagagcagcggaccagg
gtggcccatttcctagagaaacagggtttcaagcagcaggctctggctgtgtccacagac
ccagaacacaggtttgagctagcgttgcagctgggagagttgaagatcgcctaccagctg
gctgtggaggcagagtcggagcagaagtggaagcagttggcggagctggctatcagtaag
tgccagttcggcctggcccaggagtgcctgcaccacgcccaggattacggtggcctgctc
ctccttgccacagcctccggtaacgccactatggtgggcaagctggctgagggggcagag
agggacggcaagaacaatgtggccttcatgacctacttcctgcaggggaaactggatcag
tgtttggagcttctgatcaggacaaaccgactacctgaagctgccttcctggctcgcacc
tacctgcccagtcaggtgtcccgtgtggtcaaattgtggagggagaacctggctaaggtc
aaccagaaggcggccgagtccctagcagaccccacagagtatgagaatctgttccccgga
ctgaaagaagcctttgcagctgagcattacctccgagagacctgcttgggcactactagg
cctgccaaagattaccctcttgtcacgctcaatgaagacaggaatattctcgaggaggct
cagggttacgagcctaaaggaaccttcattcctcttgcctctaagacacaggatagtgag
gagtcagtggcagcagctcccgtcgctgcagcagctgtgaggtcttctgctgctcctaca
gcagtggagaaagaggaagaggaggaggaggaagaggaggaaatccctgaattctcacag
tcgcaaaaagataagactctggacgagctggaagtggacctggacaacatggagctggat
gacatcgacaccacagatgtcaacctcgacgatgactttctggatgattga
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