Siniperca chuatsi (mandarin fish): 122886837
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Entry
122886837 CDS
T08948
Symbol
ubtfl
Name
(RefSeq) LOW QUALITY PROTEIN: upstream binding transcription factor, like
KO
K09273
upstream-binding transcription factor
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
schu03000
]
122886837 (ubtfl)
03021 Transcription machinery [BR:
schu03021
]
122886837 (ubtfl)
Transcription factors [BR:
schu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
UBF
122886837 (ubtfl)
Transcription machinery [BR:
schu03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
UBF
122886837 (ubtfl)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box_5
HMG_box
HMG_box_2
NOA36
DUF4473
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
122886837
NCBI-ProteinID:
XP_044075506
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All DBs
Position
LG13:complement(386921..400425)
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AA seq
710 aa
AA seq
DB search
MNGSSSVSRAQSARIKNEPDDWSKEDCLTLLERIRSLLPDGDGMKYKTTESHFDWEKVCF
GSFTGDMCRQKWQKVSSEVRKYRTMTELIVDATEFVKNPYKGKKLKTHPDFPKKPLTPYF
RFFMEKRAKYAKIHPEMSNLDLTKILSKKYKELPDKKKQKYITEFQREKEEFEKNMARFK
EDHPELMEERKKSDLPEKPKTPQQLWYNHEKKAYMKLHPEVSQKELKEALRRQWSQLSDK
RRLKWISKALELQKDYEGSMRAYHEAHPDVTSDDHVRSVLTKAERQLKDKFDGXPTKPPP
NGYSLYCAELMVNMKDVPSTERMVLCSKQWKMMTQKEKDMFQKRCEQRKKQYDIDLQRFL
ESLPEEERDRVMTEEKLGGAKLGGGVASSPHRAKSPSVKERGREAEPEPWIPAGAPKDRR
DGKKTAKLPETPKTAEEMWQHSVIGDYLAKYRSDRRKAQAGMEAAWKSMEKKEKIPWIKK
AAEDQKRYEVQYQPVRELLEMRAPPAGQSQRKPKFDGEPKKPPVSGYQMFSQELLTNGEL
NHFSLKERMVEIGKRWHKLTQSQKDKYKKLVEEQQVEYKAELEAWVKSLSPQDRAVYKEF
STSKRRSTAKVRSSPGAKVRVTAKKAASSRAATQTVGVAKRAMAYRAKQDMSDSDEEEEK
SDSSDSDEDDETSGSTDSDDDDDENDDDDEDDEDDEDQSSSEESSDSDSD
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgaacggcagcagcagcgtctccagagctcagagcgcgaggatcaagaatgaaccagat
gactggagtaaggaggactgtctgactctgttggagaggattcgcagtctgctgccggac
ggagacggcatgaaatataaaaccacggagtcgcacttcgactgggagaaagtttgcttc
ggcagcttcaccggagacatgtgccgccagaaatggcagaaagtctcatccgaggttcgt
aagtacagaacgatgacggagctcatcgtagacgccacggagttcgtgaagaatccgtac
aaaggcaagaaactgaagactcatccagatttccctaagaaacctctgactccgtacttc
cgcttcttcatggagaaacgagccaaatacgctaaaatccacccggagatgagcaacctg
gacctgaccaagatcctgtccaagaagtacaaggagctgcccgacaagaagaagcaaaag
tacatcacagagtttcaacgcgagaaagaagagtttgagaagaacatggctcgattcaag
gaggatcatccagagctgatggaagagaggaagaagtccgacctgccggagaaacctaaa
actcctcaacagctgtggtacaaccacgagaagaaggcctacatgaagctgcacccagag
gtgagtcagaaggagctgaaggaggctctgaggagacagtggtcccagctgtctgacaag
aggagactaaagtggatcagcaaggctctggagctccagaaagactacgagggcagcatg
agagcgtatcatgaagctcatccagatgtgacctctgatgatcacgtgcggtccgtcctc
accaaagcagagcgacagctgaaggacaagtttgatggcnggccgacaaaacctccacct
aacgggtactctctgtactgtgcggagctgatggtgaacatgaaggacgtccccagcacc
gagcggatggtgctctgcagtaaacagtggaaaatgatgacgcagaaagagaaggacatg
tttcagaaacgctgcgagcagaggaagaagcagtacgacatcgacctgcagaggtttctg
gagagtctcccggaggaggagcgagaccgggtcatgaccgaggagaaactgggcggggcc
aagctgggcgggggcgtggcctccagcccacacagagccaagtctccttccgtcaaggag
cggggtcgggaggcggagccagagccgtggatacctgccggagctccgaaggacagacgc
gatgggaagaagacggcgaagcttccagagacgcctaaaacagcggaggagatgtggcag
cacagtgtgatcggagactacctggcgaaatacagaagcgaccgcaggaaggcccaggcg
gggatggaggcggcctggaagtccatggagaagaaggagaagattccttggatcaagaag
gcggcggaggaccagaagcgttacgaggttcagtaccaacctgtgagggagctgctggag
atgagggctccacctgcaggtcagagtcagaggaaacccaagtttgacggagaaccaaag
aaacctccagtgagcgggtatcagatgttctcccaggagctgctgaccaacggcgagctg
aaccacttcagcctgaaggagcggatggtggagatcgggaagaggtggcacaaactgacc
cagagtcagaaggacaagtacaagaagctggtggaggagcagcaggtggagtacaaggcc
gagctggaggcctgggtcaagtctctgtctcctcaggaccgagccgtctacaaggagttc
tccacctcgaagcgtcgcagcaccgctaaggttcgcagcagcccgggagctaaagtccgc
gtgacggcgaagaaggcggcgagttcgagagccgcgacgcagacggtcggggtcgccaag
agggccatggcgtaccgagccaagcaggacatgtccgactcggacgaggaggaggagaag
agcgactcgtccgactctgatgaagatgacgagacgtcaggatccacagacagcgacgac
gacgatgacgagaacgacgacgatgatgaggatgacgaggatgatgaagatcagagctcc
tctgaggaatccagtgactcggactcggactag
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