Siniperca chuatsi (mandarin fish): 122886885
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Entry
122886885 CDS
T08948
Symbol
cxxc1b
Name
(RefSeq) CXXC-type zinc finger protein 1b isoform X1
KO
K14960
COMPASS component SPP1
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
schu03000
]
122886885 (cxxc1b)
03036 Chromosome and associated proteins [BR:
schu03036
]
122886885 (cxxc1b)
Transcription factors [BR:
schu03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
122886885 (cxxc1b)
Chromosome and associated proteins [BR:
schu03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
122886885 (cxxc1b)
COMPASS/SET1 complex (yeast)
122886885 (cxxc1b)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CpG_bind_C
zf-CXXC
PHD
PHD_5
MutS_IV
DUF7813
Motif
Other DBs
NCBI-GeneID:
122886885
NCBI-ProteinID:
XP_044075608
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Position
LG2:26689303..26695296
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AA seq
570 aa
AA seq
DB search
MDSEMSDIDPIPGPETSSMEGENAPLYCICRKPDINCFMIGCDNCNEWFHGHCINITEKK
AKAIREWYCMRCRDKNPTLEIKYRSKKNREKEAEPDRAETQYSTPSTPDYKSERRRGSKV
KRSVRMCGECEPCRRTEDCAQCDFCKDMKKFGGPNKIRQKCRFRQCEVRARKMLRVKDEE
LSLQERRDNSYHRRRRYSEDYDSEAELYQQYKTAGLDNNMAWASDDDDEPPFSPVMRKKA
VKVKHVKRREKKFDKKKESRRHKQKQKHKDRTRYSEKGDLRDNGGQRQCLGPSCVEGARP
NSKYCSEDCGMKLAANRIYEILPQRIQQWQQSPCIAEEHGKKHLERIRREQQNARLRLTE
MERRFHELEGIIAKAKQQAVQQDEEVNEGDSEDTDLQIFCVSCSHPINPKVALRHMERCY
AKYESQTSFGSMYPTRIEGATRLFCDVYNPQSKTYCKRLQVLCPEHSRDPKVPVDEVCGC
PLVKNVFELTGDYCRVSKRKCNKHYNWEKLRRAEVDLERVRVWYKLDELFEQERNVRTAM
TNRAGLLALMLHQTIQHDPLTTDLRSNKDR
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atggacagcgaaatgtctgacattgacccaataccagggcctgagaccagcagtatggag
ggtgagaatgcaccactgtactgtatctgccggaaaccagacatcaactgcttcatgatt
ggctgtgataactgtaatgagtggttccatggccactgcattaacatcaccgagaagaag
gcgaaggcaatccgagaatggtactgcatgagatgcagagataaaaaccccacactggaa
ataaagtatagatcaaagaaaaaccgagagaaggaagctgagcctgacagagctgaaaca
cagtacagcacgccgagtactccagactataagagtgaaagacggcgtggatccaaagtg
aagcgttcagtccgaatgtgtggggaatgtgagccctgcagaaggactgaggactgtgcc
cagtgtgacttctgtaaggacatgaagaagtttggaggccccaacaaaatcagacagaag
tgcaggtttaggcaatgtgaggttcgagccaggaaaatgctgcgtgtgaaggatgaggaa
ttgtctttgcaagaaaggagggacaattcctaccacagacggagacggtactctgaggac
tacgacagtgaggcggaactctaccagcagtacaagacagcaggacttgacaacaacatg
gcgtgggctagtgatgacgatgatgagccacctttcagtcctgtcatgcgtaagaaagct
gtgaaggtgaagcacgtcaagagacgagaaaagaagtttgacaagaaaaaggagtcacga
cgccacaaacagaagcagaagcacaaagacagaaccagatacagtgagaagggtgacctc
cgggataacggagggcagcgtcagtgtctggggccaagctgtgtggagggagcgagaccc
aactccaaatactgctctgaggactgtggcatgaagttagctgccaaccggatctatgag
atcctccctcagcgtatccagcagtggcagcagagtccctgcatcgctgaggagcacggt
aagaagcacctggagcgcatccgtcgggaacagcagaacgcccggctgcgcctcacagag
atggagcgacgcttccacgaactggaaggcatcatcgctaaggccaagcagcaggcggtt
cagcaggacgaggaggtgaatgaaggtgatagcgaggacacagacctgcagattttctgt
gtgtcttgtagtcatcccatcaatccaaaagtggcactgagacatatggagagatgttac
gcaaagtatgagagtcagacctcctttggttcgatgtaccctacaagaatagaaggagca
accagactcttctgcgatgtgtacaatccccaaagcaaaacatattgtaaaaggcttcag
gttttgtgtccagaacattccagagaccctaaggtcccagtggatgaggtgtgtggatgt
cctctggtgaagaatgtgtttgagctgactggagattactgcagggtctccaaaaggaag
tgcaacaaacattacaactgggaaaagcttaggagagcagaggtggacttggagcgagtc
agggtgtggtacaagttggacgagctctttgaacaggagcgtaacgtcaggactgctatg
accaacagagctggtcttctcgcgctgatgttgcaccaaactattcagcacgacccgttg
acgaccgatctccgtagcaacaaggataggtag
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