Siniperca chuatsi (mandarin fish): 122887038 Help Entry 122887038         CDS       T08948                                  Symbol cop1 Name (RefSeq) E3 ubiquitin-protein ligase COP1   KO K10143   E3 ubiquitin-protein ligase RFWD2 [EC:2.3.2.27] Organism schu  Siniperca chuatsi (mandarin fish) Pathway schu04115   p53 signaling pathway schu04120   Ubiquitin mediated proteolysis Brite KEGG Orthology (KO) [BR:schu00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     122887038 (cop1)  09140 Cellular Processes   09143 Cell growth and death    04115 p53 signaling pathway     122887038 (cop1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04121 Ubiquitin system [BR:schu04121]     122887038 (cop1) Enzymes [BR:schu01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      122887038 (cop1) Ubiquitin system [BR:schu04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    Other single Ring-finger type E3     122887038 (cop1)   Multi subunit type E3    Cul4 complex     Target recognizing subunit (DCAF)      122887038 (cop1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  WD40 WD40_Prp19 WD40_CDC20-Fz Beta-prop_TEP1_2nd WD40_WDHD1_1st Beta-prop_EML_2 WDR55 Beta-prop_EIPR1 Beta-prop_RIG_2nd zf-C3HC4_2 EIF3I Beta-prop_TEP1_C Beta-prop_WDR19_1st zf-C3HC4 WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 zf-RING_2 Beta-prop_EML Beta-prop_DCAF4 zf-RING_UBOX zf-C3HC4_4 Beta-prop_WDR90_POC16_2nd zf-C3HC4_3 zf-RING_5 RING_XB3-XBAT31 WD40_RFWD3 Beta-prop_WDR35_TULP_N WD40_like Beta-prop_Vps41 Beta-prop_IFT140_1st Beta-prop_DCAF12 Beta-prop_IFT122_1st Beta-prop_NUP159_NUP214 zf-rbx1 zf-RING_10 WDR90_beta-prop_4th UvrD-helicase zf_C2H2_10 Motif Other DBs NCBI-GeneID:  122887038 NCBI-ProteinID:  XP_044075785 LinkDB All DBs Position LG13:complement(24400829..24419068) Genome browser AA seq 708 aa AA seqDB search MMSSNRPQQIAGGASSVPSTSSSSTGGTGNTNGGSGSNAVTSNGNNSGNVVPSRTGEGGL SVPTLAAVPSSRGGFASLSRPSASPGSRKKTLHQTPLYNGLLNSYEDKSNDFVCPICFEM IEEAHMTKCGHSFCFKCIRQSLEDSNRCPKCNYIVDNVDQLYPNFLVNELILKQKQRSEE KRLKLDHPNGSRWQVFQDVLSPDQENLDLANVNLMLELLVQKKKQLEAESQAAQRQILME FLKEARRNKREQLEQLQKELNFLEEDIKRVEEMSGLYSPMMEAECTVPNVEAPSPAPSCS SIIEPPDYSQPPGFGGTTQGKRQTWYNSTLASRRKRLTAHFEDLEQCYFSNKMSRITDEG RNLNQLDDFMECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGVTK KIKVFEYGTVIQDAVDIHYPVNEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDGFTG QRSKVYQEHEKRCWSVDFNLMDPKLLASGSDDAKVKLWSTNLDNSVASIEAKANVCCVKF SPTSRYHLAFGCADHCVHYYDLRNTKQPIMVFKGHRKAVSYAKFVNGEEIVSASTDSQLK LWNVNKPHCLRSFKGHINEKNFVGLASNGDYVACGSENNSLYLYYKGLSKTLLTFKFDTV KSVLDKDKKEDDTNEFVSAVCWRALPDGESNVLIAANSQGTIKVLELV NT seq 2127 nt NT seq  +upstreamnt  +downstreamnt atgatgtcaagcaaccggccacagcaaatcgctggtggggcgagttcagtgcccagcaca agtagcagcagcacaggagggactgggaacacaaacggtggcagtgggagcaacgccgta acaagtaatggtaacaattctggaaatgtggtaccgtcccggaccggggagggcggctta tcggtgccaactttggccgccgtgccgtcgtcccggggcggttttgcttctctgagcaga ccctctgcgtccccaggcagcagaaagaaaaccctccatcaaacacccctttacaacggc ctcttgaattcgtacgaagataaaagcaacgattttgtctgtcccatttgcttcgaaatg atagaagaggcacacatgacaaagtgtgggcacagtttctgtttcaagtgtatccgccag agtctggaggacagcaacagatgtcccaagtgtaactatattgtcgataacgtggatcag ctttacccaaactttcttgtaaatgaactgatccttaaacagaaacaaaggtcggaggag aagagactaaaattagatcatcctaatgggtctaggtggcaggtgttccaggatgtgttg agtcctgaccaggagaacttggacctggcaaatgtcaatctgatgctggaactcctggtc cagaagaagaagcagctggaggcggaatcccaagcagctcagagacagatcctcatggag ttccttaaagaagccaggagaaacaagagagagcaactagagcaactacagaaagagctc aactttcttgaagaggacattaagcgtgttgaggaaatgagcgggctgtactctccaatg atggaggcagagtgtacggtgcctaatgttgaggctccctcaccagcacccagctgcagt agtattattgagccaccagactacagccagcctccaggatttggtggaacaacccagggg aagagacagacctggtacaacagcaccctggcatcaaggaggaagaggctgacggctcat tttgaagatctggagcagtgctacttctccaacaaaatgtcgcgcatcacagacgaaggc aggaatctgaaccagctggatgactttatggagtgtctgtctaaattcacccgctacaac tccgtgcggccgctcgccaccctctcgtacgccagtgacctctataacggctccagtatt gtctccagtattgagtttgaccgtgactgtgactactttgccatcgctggtgttaccaag aagatcaaggtctttgagtacggcacagtgattcaggatgcagtagacatccactaccct gttaatgaaatgacctgcaattctaaaatcagctgtatcagctggagcagctatcacaag aatcttttggccagcagtgactatgagggtactgtcatcctgtgggatggattcactggc caaaggtccaaagtctaccaggaacatgaaaaacggtgttggagtgttgacttcaatctg atggaccccaagctgttagcctctggttctgacgatgctaaagtgaagttatggtcaacc aatcttgacaactcggtagctagcatcgaggccaaggccaatgtctgctgtgttaaattc agtccaacctccaggtatcatctggcctttggctgcgcagaccactgtgtccactactat gacctacgcaacactaagcagccaatcatggtgttcaaaggccacaggaaggcagtgtcc tacgccaagtttgtcaacggagaggaaattgtttctgcttcgacagacagtcaactgaag ctgtggaacgtcaacaaacctcactgcctgcgctccttcaagggtcacatcaatgagaag aactttgtgggcctggcttccaatggagactatgttgcctgtggcagtgaaaacaactcc ctgtacctgtactacaaaggactttccaagacactgttaacattcaagtttgacacagtg aagagcgtcctggacaaggacaaaaaggaagacgacaccaatgagtttgtcagtgctgtg tgctggagagccctgcctgatggagagtcaaatgtactgattgctgcaaacagtcaagga acaatcaaggtacttgagctcgtctga

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