Siniperca chuatsi (mandarin fish): 122887089
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Entry
122887089 CDS
T08948
Name
(RefSeq) guanine nucleotide exchange factor VAV3-like isoform X1
KO
K05730
guanine nucleotide exchange factor VAV
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04510
Focal adhesion
schu04517
IgSF CAM signaling
schu04519
Cadherin signaling
schu04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
122887089
04519 Cadherin signaling
122887089
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
122887089
09142 Cell motility
04810 Regulation of actin cytoskeleton
122887089
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Paralog
GFIT
Motif
Pfam:
RhoGEF
CAMSAP_CH
SH3_2
SH3_1
CH
SH3_9
SH2
SOS1_NGEF_PH
C1_1
PH
RHG20_PH
CDC24
SRA1
Filamin
FaAP_C
C1_2
Motif
Other DBs
NCBI-GeneID:
122887089
NCBI-ProteinID:
XP_044075897
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Position
LG13:complement(8820440..8873132)
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AA seq
854 aa
AA seq
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MESYWRQCAMWLISCNVLPANHRVTADTAQVFDLAQTLRDGVLLCQLLNNLKPHTINLKE
INLRPQMSQFLCLKNIRTFLTSCSVVFGMKKSDLFEAFDLFDVRDFGKVMDTLSKLSYTA
TAQQGGFKPFPTEENLKDEDIYNNLEDLIDENAPEDEDDLYAAVYGLEEDYAGGEIYEDL
MRTEPPPLKQAEVDVRSCCLTEIKQTEEKYTETLESIEKYFLNPLKKFFSAAEIDKVFVN
IPDLVKVHKSLMVDVQDSILNKNALNLYQIFISYKERLLIYGIYCSRVEIAIAVLDLICK
EKEDVRLKLEECSKRANNGKFTLRDLLVVPMQRVLKYHLLLQELVKHTHDAADKGNLKIA
LDAMKDLAQYVNEVKRDNETLREIDQYQKSIENLNQPLTSYGRPKGDGEVRLVSSIDKRK
QDRHIFLFDVAVIVCKRRGDIYEMKDILDLNYFKITNNPTSDREGKKWCYGFYVTHQQGH
TGFELFFKTRELKKKWLDQFEMAISNIRPEKASHNSHQFKMHTFERITSCSYCHLLLRGI
FNQGYLCLKCGLGAHKECLGRLGVCGKTDSAKPKPKESTTPPDPGLPRMIVIRDYSGIPC
PQCGPPLSIHAGDVIELMVADLHSSWWQGKILATSKIGFFPSDAVRPCPCVPKPVDYSAQ
LWFAGPMERYQAEVELLDRGNSTYLIRHRSKECTEYAISIKFNDKVKHIKILTKDSYFYI
AESRLFKTVLDLVEYYKQHSLKEGFSSLDTTLQVPYRELSNGNMPRAITKAGNVPPGGCS
FVPPSSSPFWSVFSPRVVGIAVARYDFCSRDTRELSLLQGDIITIYTKLSNGWWKGEVDG
RVGWFPSTYVEEED
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atggagtcctactggaggcagtgtgcgatgtggctgatcagctgcaacgtgctgcccgcg
aaccaccgggtgactgcggacacggcgcaggtgttcgacctggcccaaaccctgcgggac
ggggtgctgctgtgccagctactgaacaacttgaaacctcacaccatcaacctgaaggag
atcaatctcaggccacagatgtcacagttcctgtgcttgaagaacatccgcacatttctg
acgtcttgctctgtggtgtttgggatgaagaaaagtgacttatttgaagccttcgatctc
ttcgatgttcgagactttggaaaggttatggacactctatccaagctctcttacacagca
actgcacagcaaggaggattcaagccatttccaaccgaggagaacctaaaagacgaggac
atttacaataatctggaagacttgattgatgagaatgccccagaggacgaggacgacttg
tatgcggcggtctacgggctggaagaagactacgcaggtggagagatctatgaagacctc
atgaggactgagccacccccattgaagcaggcagaggtagatgtccggagctgctgcctt
acagagatcaaacagacggaggagaaatacacagagaccctggagtccatcgagaagtat
ttcctgaatcctctgaagaaatttttctctgcggctgagattgacaaagtttttgtcaac
attccagacctggttaaagttcacaagagcctgatggtcgatgtgcaggactccatccta
aacaaaaatgccttaaatctttaccagatttttatcagctacaaagagagattgctcatt
tatgggatatactgcagtcgtgtggagattgccatcgctgttttagacctcatttgcaaa
gagaaagaggatgttcgtctaaagctggaggagtgctcaaagagagccaacaatgggaag
tttacactgagggacctgctggttgtcccgatgcagagagttctcaagtaccatctactt
cttcaggagctagtcaaacacacgcatgatgctgctgacaagggcaacttgaagattgct
cttgatgccatgaaagacctggctcagtatgtcaacgaggtgaagagagataatgagact
ctaagggagattgaccagtaccagaagtctattgaaaacctgaatcagcctctaaccagc
tatggtcgaccaaaaggtgacggagaagtgcgcttggtctccagtatcgacaagaggaaa
caagacaggcacatctttttatttgatgtggctgtcattgtttgcaagagaagaggagac
atctatgagatgaaggacatacttgacctcaactacttcaagataacaaacaaccccacc
tctgacagagagggtaaaaagtggtgctacgggttctacgtgactcaccagcaggggcac
acaggctttgaactcttttttaagaccagagagctgaagaagaagtggctggatcagttt
gaaatggccatatcaaatatccgaccagagaaagccagccacaactcccaccagttcaag
atgcacacctttgaaaggatcacttcctgtagttattgtcacctcttgctcaggggcatc
tttaaccagggttatctctgtctaaaatgtgggctgggggctcataaggagtgtcttggt
cgactgggagtctgtgggaaaacagattctgccaagccgaagcccaaggaaagcacaaca
ccaccagacccaggtttacccaggatgattgtgatcagagactacagtggcatcccctgt
ccccagtgtgggcccccactaagcattcatgcgggggatgtcattgaactgatggttgcc
gacctgcacagctcctggtggcagggcaaaattctggcgacaagcaagattggcttcttt
ccaagtgatgctgtgaggccttgtccatgtgttccaaaacctgtcgattactctgcccag
ctctggtttgcagggcctatggagagataccaggctgaggtggagctcctggacagagga
aacagcacctatctgattcgacacaggagtaaagagtgcactgaatatgccatcagtata
aagttcaacgataaagtcaagcacattaagattctgaccaaggatagctacttttacatc
gctgagagccggctgttcaagactgtgctggacttggtggaatactacaagcagcactct
ctgaaggagggtttcagcagtcttgacaccactctgcaggtcccctatagggaactgtcc
aatggaaacatgcccagggccattaccaaggctggcaatgttcctcctggcggctgcagc
tttgttcctccctcctcctcgcctttctggtcagtgttttctcccagggtggtgggtatt
gcagtggcacgctatgacttctgctccagagacacacgagagctctccctgctgcaggga
gacattatcactatctacaccaagctgtccaatgggtggtggaagggagaggtcgacggc
agggtgggctggtttccctctacttacgtggaagaggaggactga
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