Siniperca chuatsi (mandarin fish): 122887244
Help
Entry
122887244 CDS
T08948
Symbol
hcfc1a
Name
(RefSeq) host cell factor 1a isoform X1
KO
K14966
host cell factor 1
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu03083
Polycomb repressive complex
schu04980
Cobalamin transport and metabolism
schu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
122887244 (hcfc1a)
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
122887244 (hcfc1a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
122887244 (hcfc1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
schu01009
]
122887244 (hcfc1a)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
schu03036
]
122887244 (hcfc1a)
03029 Mitochondrial biogenesis [BR:
schu03029
]
122887244 (hcfc1a)
Protein phosphatases and associated proteins [BR:
schu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
122887244 (hcfc1a)
Chromosome and associated proteins [BR:
schu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
122887244 (hcfc1a)
HMT complexes
COMPASS/SET1 complex
122887244 (hcfc1a)
MLL-HCF complex
122887244 (hcfc1a)
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
122887244 (hcfc1a)
Mitochondrial biogenesis [BR:
schu03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
122887244 (hcfc1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_3
Kelch_5
Kelch_4
Kelch_1
Kelch_6
fn3
Motif
Other DBs
NCBI-GeneID:
122887244
NCBI-ProteinID:
XP_044076198
LinkDB
All DBs
Position
LG2:complement(26604628..26620828)
Genome browser
AA seq
1751 aa
AA seq
DB search
MSAPGSAVSGTTTSVLQPRWKRVLGWSGPVPRPRHGHRAVAIKELMVVFGGGNEGIVDEL
HVYNTATNQWFIPAVRGDIPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNDLYELQASRWE
WKKLKAKNPKNGPPPCPRLGHSFSLVGNKCYLFGGLANDSEDPKNNIPRYLNDLYTLELR
AGSSVVGWDIPITYGVLPPPRESHTAVVYTEKTSRKSRLIIYGGMSGCRLGDLWTLDIDT
LTWNKPSVNGTAPLPRSLHSATTITNKMYVFGGWVPLVMDDVKVATHEKEWKCTNTLACL
NLDTMCWETVLMDTLEDNIPRARAGHCAVAINSRLYVWSGRDGYRKAWNNQVCCKDLWYL
ETERPHAPARVQLVRANTNSLEVSWGAVSTADTYLLQLQKYDIPATPAAASPVMSATPSL
PVNSPKSPAPAAAAPSAQSLPQTAVLKVAAQQSATGASVVTVRPSQPGKSPVTVTSLPPG
VRMVVPAQTTQGSPIGSSPQMSGMAALAAAAAATQKIPPSSAGTVLNVPAGATILKTVAV
SPGTTTMKVASPVMVSNPATRMLKTAAAQVGTATASSPTTTRPIITVHKSGAVTVAQQAQ
VVTTVVGGVTKTITLVKSPLTMGSSGTLISNLGKMMSVVQTKPVQTSAVTGQASTNPLTQ
IIQTKGPLPAGTILKLVTSADGKPTTIITTSQAGGTGNKPTILNISGVSPTTTKQGTTII
KTIPMSAIMTQPGATGVTSSAGMKTPITILTTKVMTTGTPGKIITAVPKLATAAGQQGLT
QVVLKGAPGQPGTILRTVPMSTVGGVRLVTPVTVSAVKPTVTTLVVKGTTGVTTLGTVTG
TVSSSLAGGTVDSSNASLVTPITTLGTIATLSSQVISPSAITVSAAQTSLTSASTQPSST
MTVQNQPTQVTLITTPSGVEAQPVQDLPVSILASPTSEQPSSTEAGAAGEGSGTVTLVCS
NPPCETHETGTTNTATTSSATIGAGQVCSNPPCETHETGTTNTATTASSNMSALRVCSNP
PCETHETGTTNTATTASANMGGVQKVCSNPPCETHETGTTNTATTASANMGGVQKVCSNP
PCETHVTGTTNTATQASSNMNTGQTGTTQRVCSNPPCETHETGTTNTPSTATSSMGSDQT
STATGLVQRVCSNPPCETHETGTTSTPSTATSSMGGDQTSTTTGLVQRVCSNPPCETHET
GTTNTATTATCNMETGEGTAAQQTEEGAESTSSTEVASTTAATGMVTTTQGRAITTVTQS
TPAPGPSVPSISSITEGVSTAASSTEEPMQTDETASAEAAPAEEGATAMETQAEGEAAAA
TALNLPSELMSEGQAATLMVTGLSDEELAVTAAAEAAAQAAATEEAQALAIQAVLQAAQQ
AVMNEGDSTGESQQPTNIPIMLTQQELAALVQQQQQLQEAQAAAQQATVDTSLPTEGLAP
ADSLNDPSVESNGHNEMAAAVTSAVASLLPRTTAETLAPSSTFAPSVSVASPAKLQAAAA
LAEVANGIEGEKQGPQPTPVKPVVKKENQWFDVGIVKVTNMVVTHFYVPADDSHGDDDSG
IMPDYSQMKKMELQPGTAYKFRVAGINACGRGAFSEISAFKTCLPGFPGAPCAIKISKSP
DGAHLTWEPPSVTSGKIIEYSVYLAIQSNQTAEAKASTPAQLAFMRVYCGPNPSCLVQSS
SLSNAHIDYTTKPAIIFRIAARNEKGYGPATQVRWLQESGKDAASAKPAPKRPGTSPDTK
ATGPKKARTDQ
NT seq
5256 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcccctggctccgcggtgtctgggaccacgacgtcggttctgcagccgcgatgg
aaacgggtcctcggatggtccggtcctgttccccggcccagacatggacacagagctgtg
gctataaaggagcttatggttgtctttggcggtggaaacgaagggattgtggatgaatta
catgtatacaacaccgcgacaaaccagtggtttatcccagcagtccgtggtgatatcccc
cctggttgtgctgcatatggttttgtctgtgatggcacaagattgctggtgtttggtggc
atggtggagtatggaaagtacagcaacgatctctatgaactacaggccagcagatgggaa
tggaaaaagttgaaagcaaaaaacccgaagaatggcccccctccttgtcctcgtcttggc
cacagtttttccctggttggcaacaaatgctacctgtttggtggactagccaatgacagt
gaggacccaaaaaacaacattcccagatacctgaatgatctgtacacacttgagcttcgt
gcaggttccagtgtggttggatgggatattccaatcacatatggagttctgcctcctccc
cgtgagagccacactgctgttgtatacacagaaaagacgagcaggaaatctcgcctgata
atctatggagggatgagtggttgtcgtcttggagatctgtggacacttgatattgatacc
ctgacatggaacaaaccatcagtaaatggaacagcaccgctccccagaagtcttcactct
gctaccaccatcacaaacaagatgtatgtttttggaggatgggttcctttggtaatggat
gatgtcaaagtggccacacacgagaaggagtggaagtgcacaaacactcttgcctgccta
aatcttgacaccatgtgttgggagacagtattgatggatactcttgaagacaacatcccc
agggcccgtgctggccactgtgctgtggccatcaattccagactctatgtttggagtggc
cgtgacggttatcgtaaagcttggaacaaccaagtctgttgtaaagacctgtggtacctg
gaaacagagcggccacatgcccctgccagggtgcagttagtccgtgccaacacaaactct
ctggaggtgagctggggtgccgtctcaactgctgacacctacttactgcagctgcagaaa
tatgacatccctgcaactccagctgcagcctcaccagtcatgagtgcaactccctcgctg
cctgtgaactccccaaagagccccgcaccagctgctgcagcaccctctgctcagagccta
ccacagacagctgttttgaaggttgcagctcaacagtctgccacaggtgcatccgttgtc
acagttcgccccagccaacctgggaaatcccctgtcaccgtgacatcccttcctccaggt
gttcgaatggtagtgcccgcccagaccacccaaggatcgccaattggcagtagccctcag
atgagtggcatggcagctttagctgcagcagctgcagcaacacagaagatcccaccctcc
tctgcaggcactgtcctcaatgttcctgcaggtgccaccattctcaaaacagtagctgtt
tcccctggcacaaccacaatgaaagtggcttctccagtcatggtcagtaacccggccacc
cggatgctgaaaactgctgcagcccaggtgggcacagcaactgcttcctctcccaccacc
accagacccatcatcactgtgcacaagtctggcgcagtcacagtggcccagcaggcccag
gttgtaaccactgtggtgggaggagtcaccaagaccatcactctggtcaagagtcccctc
accatgggcagcagtggcactctgatctccaaccttggcaagatgatgtctgtggtacaa
accaagccagtgcagacatcagctgtaacaggccaggcttccactaaccctctcacacag
atcatacagacaaagggtcccctcccagctggcactatcctgaagctggtgacctccgca
gatggcaagcccacaaccatcatcaccacttcccaggcagggggcacaggaaacaagccc
actatcctcaacatcagcggtgtctctcctaccaccaccaagcagggcaccaccattatt
aagaccatccccatgtcggccatcatgacccagcctggagctacaggtgtaacaagcagt
gcaggcatgaaaacgcctatcacaatccttaccacaaaggtgatgactactggaactcct
ggtaaaatcatcactgcagtgcccaaacttgccactgcagctggccaacagggtctgaca
caggtggttttgaagggtgctcctgggcaacctggcactattttgcgcactgtgcccatg
agcacagtgggtggtgttcgacttgttacaccagtgacagtgtctgccgttaagcccact
gtcaccactctggttgtcaaggggactactggtgtcaccactcttgggacagtcactggt
acggtctccagtagcctggcaggaggcacggtggacagttccaacgcctctctggttacc
cccatcacgacactgggaaccatcgctaccctgtccagccaggtcattagcccatctgcc
ataactgtgtcagctgctcagaccagcctgacttctgcctccacacagccctcctctacc
atgacagtgcagaaccagcccacccaggtgactctgatcacaacccccagtggtgtagaa
gctcagccagtgcaggatctaccagtgtccatcctggcttcaccaacctctgagcagccc
agctccactgaggctggagcagctggagagggctctgggaccgtcaccctggtctgctct
aacccgccctgcgagacccacgagaccggaaccaccaacacagccaccacctcctctgct
acaattggagcaggacaggtgtgctctaatccgccctgtgagacccacgaaacaggcacc
accaacacagccacaactgcatcttcaaatatgtctgcgctgcgtgtgtgctccaaccca
ccatgtgagacccatgaaactgggacaactaacacagctaccacagcatcggctaacatg
ggaggagtccagaaggtgtgctccaacccaccctgtgagacccatgaaactgggacaact
aacacagctaccacagcatcggctaacatgggaggagtccagaaggtgtgctccaaccca
ccctgtgagactcatgtgacaggcaccaccaacacagccacccaggcgtcatctaacatg
aacacaggccagacgggcaccacgcagagggtgtgctcgaacccaccctgcgaaacacac
gagactgggaccaccaacaccccatcaacagccacatccagcatgggaagcgaccagacg
agcacagcgacgggcctggtccagagggtgtgctccaacccaccctgcgaaacacacgag
acggggaccaccagcaccccatccacagccacctccagcatgggaggcgaccagaccagc
acaacgacaggcctggtccagagggtgtgctccaacccaccctgcgaaacacacgagacg
gggaccaccaacacagccaccactgccacctgcaacatggagacaggcgaaggcacagca
gcccagcagacagaggagggagcagaaagtaccagcagcacagaagtggcctccaccact
gcagcaactggcatggttaccaccacccagggcagggccatcactactgtcacccagtct
acaccagcccccggaccctctgtaccttcgatctcatcaatcacagagggtgtgagtact
gctgccagctccacagaggaacccatgcaaactgatgagacagcatcagcagaagctgca
cctgcagaggagggagccaccgctatggagacgcaagcagagggagaagcagccgcagca
acagccttgaatctgccctcagagctgatgtctgagggtcaggcagccacgctcatggtg
acggggctgtcggacgaggagctggctgtgactgcagcagcagaggccgccgctcaggct
gcagccactgaagaagcccaggctcttgctatccaggctgtcctccaggcagctcagcaa
gccgtaatgaatgagggcgattccactggagagagccagcaacccaccaacatccccatc
atgttgacccagcaggagctcgcagcgctggtccaacagcagcagcagctgcaggaggcg
caggctgctgcacagcaggccaccgtggacacaagcttgcccactgagggcctcgcccct
gctgacagcctcaacgacccctctgtcgagagcaatgggcacaatgagatggctgccgca
gtcaccagtgctgtggcgtcactcctgccacgtaccactgctgagacacttgctccatcg
agcacatttgcaccctctgtatcggtggcgagtccagccaagctgcaagcagcagccgct
ctagcagaggtcgccaatggcatcgagggagagaaacaaggccctcagccaaccccagtg
aaacctgttgtaaagaaagagaaccagtggtttgatgttggaatcgttaaagtgacaaat
atggttgtcacccatttctatgtgccagcagatgattctcatggagatgatgactctggc
atcatgccagactacagccagatgaagaaaatggagctgcaacctggaacggcttacaag
ttccgtgttgctggaatcaacgcttgtggtcgtggagctttctcagagatatctgctttc
aagacttgcctaccaggcttcccaggggcaccttgcgccatcaaaatcagcaagagccca
gatggcgcccacctgacctgggagccaccctcggtgacgtcggggaagatcatagagtac
tctgtgtacctggccatccagagcaaccagacagctgaagccaaggcctctaccccggca
cagctagccttcatgcgcgtgtactgtggacccaacccctcctgcttggtgcagtcgtcg
agcctctccaacgcccacatcgactacaccaccaagccagccatcatcttccgcattgcc
gcccgcaatgagaagggctacggtcctgccacccaagttcgatggctgcaagaatccggc
aaagatgccgcctctgcgaaaccggcccctaaaagaccaggcacctcccctgatactaag
gctactggtccaaagaaagcaaggacggaccagtga
DBGET
integrated database retrieval system
