Siniperca chuatsi (mandarin fish): 122887276
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Entry
122887276 CDS
T08948
Symbol
rpap2
Name
(RefSeq) putative RNA polymerase II subunit B1 CTD phosphatase rpap2 isoform X1
KO
K20827
RNA polymerase II-associated protein 2 [EC:
3.1.3.16
]
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
schu01009
]
122887276 (rpap2)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
schu03021
]
122887276 (rpap2)
Enzymes [BR:
schu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
122887276 (rpap2)
Protein phosphatases and associated proteins [BR:
schu01009
]
HAD phosphatases
Fcp/Scp phosphatases
122887276 (rpap2)
Transcription machinery [BR:
schu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
122887276 (rpap2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP2_Rtr1
Motif
Other DBs
NCBI-GeneID:
122887276
NCBI-ProteinID:
XP_044076268
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All DBs
Position
LG13:complement(19567102..19576144)
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AA seq
711 aa
AA seq
DB search
METELGSRSRVPAKTSEKGGKRVKALTAEEDARRREVVKEKLWEKLELEKRALKVVERLL
EDSVSEDFLVDCARFITPASYKDAIEERFIAKLCGYPICSNKLVKIPTQQYKISTKTNKV
YDITECKCFCSNFCYKASKEFELQISNTPLWLRQHESPPEIKLMKKGDGRSSGEEVMLLE
RRLQEEDIEDPLAAQPEDLYSCQQRSAAAGLSHSESSDIEQEQDFVSSVVSQWQGPRVHW
GDLPKHRDEDKKGERGKIERQKKQRREGDEEEIERRQSRDAEREGKMREDENRRESLSCK
REAGTDAEKRKQLLSLNTDKPNGEQVPKEKGLPQEPSVEEATAKLNLCSLSETVTHAAPL
PVDSTATQVDLLTSPPCKDSKPSTESKNLPSSTLINTNQDSHNMALTSQAGLDITQVGMS
KRGAAGLRDLLKNRTAGAKSESTRLNLLEHLRRTLKDWSTDKTLKFLYGTDHSLDSPFAD
VKEDEEGEELDEDDLEDEVTNEEAKEGDAGVQKRPSAAAPDYKMLQKESQQLELRVREFY
KGTWILPEEVEDPDGNEVTAQDQSTKNPVLPLLDSHAQHVIQKRITVEKLTSCLRIIVGP
LRLTMSDVSTDLNNLVRTFSCLALTSQEDRKHCVKGASWFTSMYLKVHQHKHHPQNSRVD
PHSCCASPSVVRGVSGGAGSLGDGSISGVFEHTDGGARSTGAGPSELSPAV
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atggagacggagctgggaagcaggagcagagtcccagctaaaacctctgaaaaaggtggg
aaacgcgtcaaagcactgactgctgaagaagatgcaagaaggagagaggtggtgaaggag
aagttatgggagaagttggagctggagaaaagagccctgaaggtagtggaacgtctcctg
gaggacagtgtatctgaagacttcctggtcgactgtgcaaggttcattactcctgctagt
tacaaagatgctatagaggagagattcattgctaaactgtgtggttatcccatatgttca
aataaactggtcaagatcccaactcaacagtataaaatttctactaagaccaataaggta
tacgacatcacagagtgcaagtgtttttgtagtaacttctgctacaaagcctccaaagag
tttgagctacaaatatcaaatacacctctttggctcaggcagcatgaaagtcctccagaa
attaaactgatgaagaaaggagatggcaggagctctggtgaggaggtgatgctgttagag
cggcgtctccaagaggaggatatcgaggacccactcgctgctcaacctgaggacctttac
agctgtcagcagcgttctgctgcagctggcctcagccacagcgaaagcagcgacattgaa
caggagcaggacttcgtctccagcgtggtttcacagtggcagggacccagggtgcactgg
ggcgacctgcctaaacatagagatgaagacaagaaaggtgaacgagggaagattgagagg
caaaagaaacagaggagggagggagatgaagaggagattgagcgtcgtcaaagtcgggac
gcagagagggagggaaaaatgagagaagacgagaatagacgggagtcgctttcatgtaaa
agagaagctggaactgatgctgagaaacgcaaacagctgctctcattaaacacagacaaa
cctaatggagaacaggtgccaaaggagaaaggcttgcctcaggaacccagtgtggaagag
gctacagctaagctgaatttgtgcagtttatctgagacagtcactcacgctgctcccctg
cctgttgactcaacagccacacaagtagatctactcacctctccaccttgtaaagactca
aaaccctcaacagaaagcaaaaatctcccttcttcaactctgatcaacacgaatcaggac
agccacaacatggcattgaccagccaggcaggcctcgacatcacccaggtgggtatgagc
aagagaggggcagcagggctacgagatctactcaagaaccgtactgctggagccaaatcc
gaatccacccggctgaatctcctcgagcacctgagaagaacattaaaggactggagcact
gacaagaccctgaagttcctgtacggcactgaccattcattagactctccttttgctgat
gttaaagaagacgaagaaggagaggagctggatgaagacgaccttgaggatgaggtgacc
aatgaggaggcaaaagagggtgatgctggggtgcagaagagaccgtctgccgcagctccg
gactacaagatgctgcagaaagagagccagcagctggagctaagagtcagggagttttac
aaggggacctggattctgcctgaggaggtagaggacccggatggaaacgaggtgacagcc
caggaccagagcacgaagaacccggttctgccactccttgactcacatgctcagcacgtc
atccagaaacgaatcacagtggagaagctcacaagctgtctcagaatcattgtcggccct
ctgcgtctcaccatgagtgacgtctccactgacctgaacaacctggtcaggaccttcagc
tgtttagctttgacgtctcaagaagacagaaaacactgtgttaaaggggcatcatggttc
acatcaatgtatttaaaggttcaccaacacaaacatcatccacaaaactccagagtggac
cctcatagctgttgtgcttctccatctgttgtcagaggtgtctctggtggtgcgggaagc
cttggagacggcagcatcagtggagtatttgaacacactgatggaggagctcggtctaca
ggagcaggaccttctgaacttagtccggctgtttaa
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