Siniperca chuatsi (mandarin fish): 122887287
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Entry
122887287 CDS
T08948
Name
(RefSeq) transcription factor Sox-14
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
schu03000
]
122887287
Transcription factors [BR:
schu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
122887287
BRITE hierarchy
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
SOXp
Motif
Other DBs
NCBI-GeneID:
122887287
NCBI-ProteinID:
XP_044076291
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Position
LG13:complement(19713789..19724075)
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AA seq
232 aa
AA seq
DB search
MNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSDSEKRPYIDEAKRLRAQHMKE
HPDYKYRPRRKPKSLLKRDRFVFPLPSLLGDAAEHLKGFSMDSFLVPGDKARALLAPASS
SSSSSFSLLEPVAQFSTGAVQRMAEIPHTLAAGALPFSAHTFGYQTGGIAGLACPGQHTH
THPTPSSPGYVVPCSCSAWSAASLQPQVAYILFPGGVTKNGMDAYTSPSSSV
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atgaatgctttcatggtgtggtccagaggccagaggagaaaaatggcccaggaaaaccca
aagatgcacaactctgaaatcagcaagagactcggcgcggagtggaagctgctctctgac
tccgagaaacgtccgtacatcgacgaggccaagaggctgcgggctcagcacatgaaggag
cacccggactacaagtacagaccccggcgcaaacccaagagtctcctgaagagggaccgt
ttcgttttcccgttgccgtctttactcggggacgcagcggagcacttgaagggattttcc
atggactcctttcttgtccccggggataaagccagagctctcctcgctcccgcctcctcc
tcctcctcttcgtccttctcgctgctggagccggtggcgcagttcagcaccggagccgtc
cagcggatggcggagataccgcacactctggccgccggcgctctgcccttcagcgcgcac
acgtttggataccagactggagggattgcgggtctggcttgccccggacagcacacccac
acccacccgacgccctccagcccgggatacgtggtgccgtgtagctgtagcgcctggtct
gctgccagtttacagcctcaggtagcctatattctcttccctggaggggtgaccaagaac
ggcatggacgcgtacacttcacccagctccagcgtgtga
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