Siniperca chuatsi (mandarin fish): 122887292
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Entry
122887292 CDS
T08948
Symbol
zgc:110269
Name
(RefSeq) probable flap endonuclease 1 homolog isoform X1
KO
K04799
flap endonuclease-1 [EC:3.1.-.-]
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu03030
DNA replication
schu03410
Base excision repair
schu03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
122887292 (zgc:110269)
03410 Base excision repair
122887292 (zgc:110269)
03450 Non-homologous end-joining
122887292 (zgc:110269)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
schu03032
]
122887292 (zgc:110269)
03400 DNA repair and recombination proteins [BR:
schu03400
]
122887292 (zgc:110269)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
schu04147
]
122887292 (zgc:110269)
DNA replication proteins [BR:
schu03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
122887292 (zgc:110269)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
122887292 (zgc:110269)
DNA repair and recombination proteins [BR:
schu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
122887292 (zgc:110269)
Exosome [BR:
schu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
122887292 (zgc:110269)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XPG_I
XPG_N
5_3_exonuc
XPG_I_2
Motif
Other DBs
NCBI-GeneID:
122887292
NCBI-ProteinID:
XP_044076300
LinkDB
All DBs
Position
LG13:19754856..19764171
Genome browser
AA seq
348 aa
AA seq
DB search
MGITKLADLIRSDAPDAISHKDISDYTGKVIALDTSIVMNQFRAATPSLSPLTGLFFRTL
TFLEHDIKPVFVFDGKPPGEKTAVLKKRAEAAGWSSPNRTGTASSLTKDCLQLLKLLGVP
VIQAPGDAEARCARLVREGTVDAVASEDMDTLPFGANILIRQLNAKKDGEVIEYSLPKLL
EKLQISHEEFVDLCILLGCDYCEKITGLGPRRALTLIQKHRTIENVVLHINRKTHPVPDV
WKYEEARKIFLDAPQTVAPELTWTEPDEEALVGFLCHVKRVKEDRVRHRMEKFRQMRESK
REEREKERAEGRSRQTRMEDFFRVTRKRDQPVEAADSLSSNRKRPKSK
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggggatcactaaactggcagatttgatccgctcagatgctcccgatgctatttctcat
aaggatatcagtgactacacaggaaaagtaatcgcactggacacctctattgttatgaac
cagttccgtgcagcgacgccttcactaagccccctgacaggtctcttcttccgcacgctc
accttcctggaacatgacataaagccagtctttgtgtttgatggaaagcctcccggggaa
aagacagctgttcttaagaagcgagctgaggcagctggttggagctcccccaaccgcact
ggcacagcatcgtccctgaccaaagattgtctccagctcctgaagcttctaggtgtacct
gtcatccaggctccaggggacgctgaggcacggtgcgcccggctggtgagagaggggact
gtggacgctgtggcatcagaggacatggacacactgccgtttggagccaatattctcatt
cgccagctgaacgccaagaaggatggtgaagtcattgaatattctttacccaagctgttg
gagaaactccaaattagtcacgaggagtttgttgacctgtgtattttgttgggctgtgac
tattgtgaaaagattaccggtttgggtcctaggagagctctgacactgatccagaagcac
cgtactattgagaatgtggttttgcatatcaacagaaagacccatcctgtgccggatgtc
tggaagtatgaagaagcgcggaagatattcttggatgcaccacaaaccgtagctcctgaa
ctcacctggactgagccagatgaagaagccttggttgggttcctctgtcacgtcaaacgc
gtgaaggaggacagggtccgtcatcgaatggagaagttccgtcagatgcgtgagagtaag
cgggaggagagggaaaaggagagggcagaagggcgtagcaggcagactcgcatggaggac
ttctttagagttaccagaaagagggatcagcccgtggaagctgcagactctttgagcagc
aacagaaagagaccaaagtcgaaataa
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