Siniperca chuatsi (mandarin fish): 122887306
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Entry
122887306 CDS
T08948
Symbol
colgalt2a
Name
(RefSeq) procollagen galactosyltransferase 2 isoform X1
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu00310
Lysine degradation
schu00514
Other types of O-glycan biosynthesis
schu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
122887306 (colgalt2a)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
122887306 (colgalt2a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
schu01003
]
122887306 (colgalt2a)
Enzymes [BR:
schu01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
122887306 (colgalt2a)
Glycosyltransferases [BR:
schu01003
]
O-Glycan biosynthesis
O-linked Gal type
122887306 (colgalt2a)
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Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
Motif
Other DBs
NCBI-GeneID:
122887306
NCBI-ProteinID:
XP_044076334
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Position
LG13:19936287..19946757
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AA seq
618 aa
AA seq
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MPLGFVGFRFYFVILAGKLFLHSSTEELPPDHLLQPESSLLKPTVLITILARNAQHSLPY
FLGCIDRLDYPKDRIIIWAASDHSVDSSTAVLREWLKGVQHLYHSVEWRPMEQPSSYADE
QGPKHWPDSRFTHVMKLKQAALRAARRLWTDYILFVDSDNLLTNRQVLSDMIAENLTIVA
PMLESKGLYSNFWCGVTPEGYYRRTPEYIPIRKWKRQGCFAVPMVHSTYLLDLRRRASRA
LAFHPPHPDYPYHLDDIMAFAFSARQAGVQMYVCNKDHYGYLPVPLKQDQTLEEEEESFT
HTLTEALIAYTMEPSQYTHAMPKEPGKMGFDEIFLINLKRRSDRRDRMLSTLAVLGINIT
LTEAVDGKALNSSRLKAMGIDMLPEYKDPYSDRVLTRGEIGCFLSHYNIWKQVLQQELQQ
VLVLEDDVRFEPRFCCRLVAVMENLQRVGLEWDLIYVGRKRLQVKEPEFWVKGVSNLVHP
GYSYWTLGYVLSLNGAKKLLQAKPLNKMLPVDEFLPIMFNKHPKDEYMQYFEQRDLRAFS
VEPLLLFPTHYTGEPGYVSDTETSTIWDDEAVETDWDRDGAKHRREQETEDVGFQPVAPQ
SARGDVPPLSASGNRGEL
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgcctcttggatttgtgggattcagattttattttgtgattttagcaggaaagctcttc
ctgcacagcagcacagaggagcttccacctgatcatctcctccaaccggagtcctctctg
ctgaagcccacagtgctgatcaccatcctcgcacgcaacgcacaacacagcctcccttac
ttcttgggatgcatcgacagactggactacccgaaggaccgcattatcatctgggcagcc
tctgaccacagtgtggacagtagcacagccgtgcttcgggagtggctcaaaggagttcag
cacctgtaccactcggtggagtggagacccatggagcaaccaagctcttatgcagatgag
cagggtcccaaacactggcccgactctcggttcacccatgtgatgaagttgaagcaggca
gcactcagagctgccaggcgactttggactgactacatattgtttgtggacagtgacaac
ttgctgacaaaccgccaggtgctatctgacatgatagcagagaatctgacaattgtggca
cccatgttggaatcaaaaggcctttattcaaacttctggtgtggtgtgactcctgagggc
tactacagacgaaccccagagtatattcccatccgtaaatggaagcggcagggctgcttt
gcagtccccatggtgcactccacctacctgctggacctgaggcgcagagcaagccgagcg
ttggccttccaccctcctcaccccgactacccttaccatttagacgacatcatggccttc
gctttctctgcacggcaagcaggagttcagatgtatgtgtgcaacaaggaccattatgga
tatttaccagtgccacttaaacaagaccagacactggaagaggaagaggagagttttacc
cacacactgacagaggcactcattgcgtacaccatggagccttcacagtatacacacgct
atgcctaaagaaccaggaaagatgggatttgatgagatctttctgattaatctgaagcgc
cgctcagaccggcgggacaggatgttgagtactttagctgtcctcggcatcaacattaca
ctgacagaagccgtggatggcaaagccttgaactcctctcggctaaaggcaatgggtata
gacatgctgcctgagtacaaagacccatattcagaccgcgtgctgaccagaggggagatt
ggctgcttcctcagccactacaacatctggaaacaggtgttgcagcaggaactacagcag
gtgcttgtgctggaggatgatgtgagatttgagcccagattttgctgcaggctggtggcc
gtcatggaaaatttacagagagtgggacttgaatgggacctcatttatgtaggccgtaag
cggctgcaggtgaaggagccagagttctgggtgaagggagtcagtaaccttgtgcaccca
ggctactcctactggaccttgggttacgtcctgtcactgaatggggccaagaagctcctg
caggcaaaacctctgaacaaaatgctgcctgttgacgagttcctacctatcatgttcaac
aagcatcccaaagacgagtacatgcagtattttgagcagagggacctgagagcattttca
gtggagcctctgttgctcttccccacacactacaccggcgagcccggctacgtcagcgac
acggagacctctaccatctgggacgacgaggccgtggagacagactgggacagagatgga
gccaaacaccggcgtgagcaggaaactgaggatgtagggtttcaacctgtggctcctcag
tctgctcgcggtgacgtgcctcccctctctgccagtggaaacagaggtgaactctga
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