Siniperca chuatsi (mandarin fish): 122887563
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Entry
122887563 CDS
T08948
Name
(RefSeq) protein zyg-11 homolog isoform X1
KO
K10350
Zyg-11 protein
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
schu04121
]
122887563
Ubiquitin system [BR:
schu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
122887563
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZER1-like_2nd
LRR_Zer-1
LRR_4
ARM_ARMC5
LRR_8
ELMO_ARM
LRR_EndoS
LRR_R13L1-DRL21
HEAT_EZ
Motif
Other DBs
NCBI-GeneID:
122887563
NCBI-ProteinID:
XP_044076824
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Position
LG13:complement(21047921..21055619)
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AA seq
745 aa
AA seq
DB search
MDAEGPQALYDLCLAQVCHSLHALCSRRADSSMCLSWAPLFPQEMADQLLRKMATKGILN
DTTVGIFRNSKELRLRRASIRCCPVSAEAFRLALCPHRLQELDASCVSGGLTGANIVSSL
ASNPECRSSLQRLSLNGLHLDWESLGEDGGTRVGFSSLQGLRTLNLANTDLTDAVLEDIC
TLPQLESLDISCSAVSKLTALLDCKNTLRSLITHRLRQLDMSPTRLLFVLSQLHTLRHLD
FSDDHFTVDDSDGRDGDETVRQLLEGSPQVLPSLVSLDISGRKRITEAAVRAFVEARSGL
VFLGLLATGASSCDLLSSQKNLKVTGEANENQVCEALRRYRDRECFIREALVHLYNLITD
IDKPRPDMLKLLLSGMQNHPTSLHVHLVATACVFNLTTQDLAEAMPVSLLSSTVTQLLYA
MKTFPNHQQVQKNCLLALCSDYILQDVPFDKYLAATLVINWLSSHEDPTLQRMAVAVISI
LVAKLSTEETAQLGRDVFIMKQLLAIVQQKAMVGVVDSTLRFALSALWNLTDEMPTAARS
FIECQGLELYEEVLESYNTEPSIQQKVLGLLNNIAEVEALQADLMEEDLLEHILSLLQDP
QVEVGVRYFAGGILAQLASRPEAWTLDDELRSTILKQLHASIITWTQLEREMVSYRSFRP
FCPLLQTCQPSGVQLWAVWAIRLVCSQNTSHYSSLLEKEGVTELLKSLAAHPDTHSDIKG
LSDSILRMVEQHQSHSGPFNNHMGP
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atggatgccgagggcccccaggccctatatgacctctgcttggctcaggtgtgccacagc
ctgcacgctctgtgcagcaggcgagcggacagctccatgtgcctcagctgggccccactc
ttcccacaggagatggctgaccagctgctgcgtaagatggcaaccaaagggatactgaat
gacacaactgttgggattttccgaaactccaaagagctccgcctgcgccgagcctccatc
cgctgctgtcctgtgtctgcagaagcctttcgcttggccctctgccctcaccggctccag
gaactagatgcctcctgtgtctcggggggcctcacaggggctaacatcgtctcaagcctg
gcctccaacccggagtgcagatccagcctgcagaggttatccctcaatgggctacatctg
gactgggagtctctgggggaggatggagggacccgtgttggcttcagctccctgcagggc
ttgaggacgctcaaccttgccaacacagacctgactgatgctgtccttgaggatatctgc
actctccctcagctggagagcctggatatctcctgcagtgccgtctcaaagcttactgca
ctgcttgattgcaagaacaccctgagatctctcatcacccaccggctgcggcagctggat
atgtcacctaccaggttgctctttgtcctcagccagcttcacactctcaggcatctagac
ttttcagatgaccattttactgtggacgacagcgacgggagagatggggatgagacagtg
cggcagcttctggaggggagtccccaggtcctcccttcccttgtttctctagatatctct
ggacggaagagaatcactgaagcagcagtcagagcgtttgtggaggccaggagtggactg
gttttcttgggcctgctggccactggggctagctcctgtgatctcctgtcttcacagaaa
aatctaaaagtaactggagaggctaatgagaaccaggtgtgcgaggccctgagaaggtac
agagaccgtgagtgtttcatacgagaggccctcgtccatctctacaatctaatcactgac
attgacaaaccacgaccagatatgctaaagctgttgctgagtgggatgcagaaccaccca
acctccctgcacgtccacctggtggccacagcgtgtgtgttcaacctgaccactcaggac
ctggcagaggccatgcctgtcagcctgctcagctccactgtcacgcagctgctgtatgcc
atgaagaccttccccaaccaccaacaggtgcaaaagaactgtctgctggcgctctgcagt
gactacatccttcaggatgtcccttttgacaagtatttagcagccacgctggtgattaac
tggctgagcagccacgaggatcctacccttcagaggatggctgtggctgtcatctccatt
ctggtggccaagttgtccacagaggagaccgctcagctcggcagggacgtctttattatg
aagcagctgctggctattgtgcagcagaaagccatggtgggagtggtggactccacgctg
agatttgccctgagtgctctgtggaatctgaccgatgagatgcccactgctgctcgcagt
tttatcgagtgccagggcctggagctgtacgaggaggttctggagtcctacaacactgaa
ccttccattcagcagaaagttcttggcctcctgaacaacatagcagaggtggaggcgtta
caggcggatctgatggaggaggacctgctggagcacatcctcagcctgctacaggatccc
caggtggaggtgggggtccgttactttgcaggggggattctggcacagctcgcttccaga
ccggaggcctggactctggacgacgagctccgcagcaccatactgaagcagctgcatgca
tccataataacgtggacccaactggagagagaaatggtctcttacaggtcgttccgtcca
ttttgccctctgcttcagacgtgtcagccctcaggagtgcagctgtgggcagtctgggcc
atacggctggtctgcagtcaaaacacttcacattacagcagcctgctggagaaggagggc
gtgactgaacttctgaagtctttggctgctcaccccgacacacacagcgacattaaagga
ctatcagacagcatcttgcgtatggtagagcaacaccagagtcactcagggcccttcaac
aaccacatgggcccttga
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