Siniperca chuatsi (mandarin fish): 122887649
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Entry
122887649 CDS
T08948
Symbol
myom1a
Name
(RefSeq) myomesin 1a (skelemin) isoform X1
KO
K24495
myomesin
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
122887649 (myom1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
schu04990
]
122887649 (myom1a)
Domain-containing proteins not elsewhere classified [BR:
schu04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
122887649 (myom1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
I-set
Ig_3
Ig_DSCAM-DSCAML_C
Ig_2
ig
V-set
Pur_ac_phosph_N
C2-set_2
C2-set_3
Ig_CD22
TFIIA
Motif
Other DBs
NCBI-GeneID:
122887649
NCBI-ProteinID:
XP_044077037
LinkDB
All DBs
Position
LG13:complement(10565656..10589789)
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AA seq
1515 aa
AA seq
DB search
MSGSLQVMQKQQQQQQQQQHHQHQEQQQHRYESSCHLSTKSSFSQQSFSTYKTTTRRLKT
SVKTEKGQEVVKLSPLPKRAKRTYLAMDTDKEVIGYVIPVFRASHDVVRGLMEAREEEVT
EEGINYVAMRNLFVREAREAMDVKVVKKTRTTHVRESAERLELNKTMDEWTEFRKKMNPD
SLTHPPEFIVKPRGQTVWEGKTLKLHCTVAGWPKPRIAWYKNNVLIDAKAHPEKYTVESN
YNMHSLEIKNCDFIDTAQYHVSALNVKGEASSVATIVVKRFQEGEEAGPLDPKPHGFCPE
HGVTFETTIIDKFEVAFGSEGETLSLGCTVIVYPTVKKYQPEVVWYRNSVPLKPSKWVHT
HWSGERATLTLVHLNKEDEGMYTLRVNTKSGFDTYSAYVFVRDADVEVEGVPVAPLDVRC
HDANKDYVVVTWKQPAVEGSSSILGYYIDRCEVGTHHWAQCNDSPVKYARFPVTGLVEGR
SYIFRVRALNKAGVSRPSRVSEAVVAMDPSDRARLRAGPSAPWTGMIKFTEEDSTVGVVP
GEPTDVVVTEATKSYVVLAWKPPVQRGHEGVMYFIEKCISGTDTWQRVNTGMPVKSPRFA
LFDLAEGKSYSFRVRCCNSAGVGEPSVSTGEITVGDKLDLPSAPGNPVATRNTDTSVVVS
WGASKDVIHLVGYYIECSVVGTDVWMPCNNKPVKQTRFVCHGLTTGTNYVFRVKAVNAAG
YSQSSPNSDAVVVQAAISVPGKPTGVTLLEAVKDYMVLGWTAPAKNGGADIRGYFVDYRT
VKGDVVGKWHEMNHQALTTTSYKAENLKESVFYQFQVRAMNMAGVSKASLASAALECKEW
TITVAGAPVGLHVLEVRDTSVVVLWEPPAFNGRTPVNGYYLDVKVASAGEEGWKAAHEKA
NKMKYMKVTGLKAGTSYVFRVRSQNLAGVGKPSAVLGPILAQTRPGTKEIYVDVDDDGVI
SMVFECSEMNEGSEFVWSKNYQAITDTSRLTIVTERGRSRAIFNSPSLEDLGTFSCVVTN
TDGISSSYTLTEEGLKRLLDISHDHKFPVIPFKNEMAMELLEKGCVRFWTQVEKCTSACQ
VEYVFNDVIITQGKKYTMNFDKSTGIIEMFMDSLEVTDEGTFTFNLVDGKAKGTTSLVLI
GDEFRELQKKSEFERAEWVRKQGPHFVEYLDFTVTAECNVLLKCKIGNVKPETEITWSKD
RIEIAEDDEDAKKIERKNSELTFNIGKWVIKQEKQKEKEGKKPPAEDVPPPPRPKISKND
AGIYEVFLRDDRGKDKSTFNLTDAGYQAVMNELFRVIAKSSSEIKILSTEHGIILYSMVT
YYNEDLRVGWLHKDAKIAASERVKSGVTGEQLWLKINEPTEKDKGKYTVDIFDGKDGVKR
VFDLTGQAWEEAFEEFQRLKAAAIAERNRARVIGGLPDVVAIQEGKSLNLTGNVWGEPVP
EVSWIKNDKELVSDERYKLKFEHGKFASITIATVTTSDSGKYALLVKNKYGTEAGEFTVS
VYNPDDEENKEEKKG
NT seq
4548 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggatcattacaagtgatgcagaagcagcaacagcagcagcagcagcagcagcat
catcaacatcaggaacaacagcagcatcgctatgagagcagctgtcacctgagcaccaag
tcgtcttttagccagcagtcgttctcgacttacaagacaaccacccgtcgcctgaagacc
tctgtgaagacagagaaggggcaggaggtggttaaactgagcccgctacccaagagagcc
aaacgcacttacctggcaatggacacggacaaagaagttatcggctatgtcattcctgta
ttcagggctagtcatgatgttgttcgcggtctgatggaggcccgggaggaagaggtcacg
gaggaggggattaactatgtggccatgaggaacctgtttgtcagggaggccagggaggct
atggacgttaaagtggtgaagaaaaccagaacaacgcatgtcagggaatccgccgaacgc
ctggaactgaacaagacgatggacgagtggactgagtttcgtaagaaaatgaacccagac
agcctgacacaccctccagagtttatcgtcaagccccgtggacagactgtctgggagggc
aagactctcaagctgcattgcactgtggctggatggcctaaacccaggattgcctggtac
aaaaacaatgtgctcattgatgccaaggcccaccctgagaagtacacagtcgagagcaat
tacaacatgcactccctggagatcaagaactgtgatttcatcgacactgctcagtatcac
gtctctgccctcaatgtgaaaggggaagcatcctctgtggctactattgttgtcaaaagg
ttccaggagggcgaggaagcaggtccacttgatcctaaaccacatggtttctgccctgag
catggtgttacctttgaaacaaccatcattgacaaattcgaagtggcctttggcagtgaa
ggcgagacactgagtctgggctgcactgtcatcgtttatcctactgtgaaaaaataccag
cctgaagtcgtttggtacagaaactctgtccccttaaagccctctaaatgggttcacacc
cactggtctggagaacgtgccacactcacccttgtccacctcaacaaggaagatgagggc
atgtacaccctgcgcgtcaacaccaaatctggctttgacacctactctgcctatgtgttt
gtcagggatgccgatgtggaggtggagggggttcccgtggcccccctggatgtgcgctgt
catgatgccaacaaggactatgtggtggtaacctggaagcagccagcagtggagggcagc
agctccatcttgggatactacatcgacaggtgcgaggtgggcactcaccattgggctcag
tgtaatgactccccagtgaagtacgcccgcttccccgtcacaggactggtggaggggcgt
tcttacatcttcagggtgcgggccttgaacaaggcaggagtcagccgtccgtcccgtgtc
tccgaggccgtggttgccatggatccctctgacagagcccgcctccgagctggcccctca
gctccttggactgggatgatcaagttcacagaggaggactccactgtgggcgttgtccct
ggagagcccactgatgttgtggttaccgaggcaaccaagagctacgtggtgcttgcctgg
aagcctccagtgcagaggggtcatgaaggagtcatgtattttattgagaagtgtatttca
gggacagacacctggcagagggtgaacactggtatgccagtcaagtctccccgctttgcc
ctgtttgatctggcagagggtaaatcctacagcttccgtgtgcgctgctgcaactccgca
ggtgtgggcgagccctctgtatccacaggagagatcacggtgggagataaactggacctg
ccctcagctccgggcaatccagtggccaccaggaacaccgacacctcagtggtggtctcc
tggggggcctctaaggatgtcatacacctggtcggctactatattgaatgtagcgtggtg
ggcaccgatgtctggatgccttgcaacaacaaacctgtcaaacagactaggtttgtatgc
catggcctgactaccgggaccaactatgtgtttagggtcaaggcagtcaacgctgctgga
tacagccagagctcccccaattctgatgctgtggttgtgcaggctgctatatctgtccct
ggaaagcccactggtgtgaccctgctggaggctgtaaaggactacatggtactgggctgg
accgcgcctgctaaaaatggaggagccgatatcaggggatattttgtggactacaggacc
gtgaagggagatgtggttgggaaatggcatgaaatgaaccaccaggcattgactactacc
tcttataaagctgagaacctgaaggagagcgtcttctaccagttccaggtgcgcgctatg
aacatggcaggtgtaagtaaagcttctctggccagtgcagctctggagtgcaaggagtgg
accattactgtggcaggtgctcctgttggtcttcatgtgctggaggttcgtgacacctcc
gtcgtggtcctgtgggagccacctgcatttaatggccgcactcctgtcaatggctactat
ttggatgtcaaggtggcctctgctggagaggaaggctggaaggctgctcatgagaaggcc
aacaagatgaaatacatgaaggtgacagggctgaaggctggtacatcctacgtcttccgt
gtgcgttctcaaaatcttgctggtgttggaaagccctcagcagtcttaggtccaatcctg
gcccagactcgccctggcaccaaagagatttatgtggatgtcgatgatgatggtgtgatt
tctatggtctttgagtgctctgagatgaatgagggctctgagtttgtttggtccaagaat
taccaggctatcacagacacctctcgcctgactattgtcactgaacggggcaggtcaaga
gctatcttcaacagtccctcgctggaggatctgggcaccttctcctgtgtggtcaccaac
actgacggcatctcctccagctacacactcactgaggagggtctcaagcgtcttctggac
atcagccatgaccacaagttccctgttattccctttaagaatgaaatggccatggagctg
cttgagaagggttgcgtgcgattctggactcaggtggagaaatgcacttctgcctgccaa
gtggagtacgtctttaatgacgtcatcattactcagggaaagaaatacacaatgaacttc
gacaaatccaccggcatcattgaaatgtttatggactctctggaggtcactgatgaggga
actttcacctttaacctggtggatggcaaggctaagggtacaaccagtctggtgctcatt
ggagatgaattcagggagcttcaaaagaaatcagaatttgagagggcagaatgggtcagg
aaacaaggtccacactttgtcgagtaccttgacttcactgttactgcagaatgtaatgtg
ctgttgaaatgcaagataggaaatgtcaaaccagagactgagatcacctggtctaaggac
agaattgagattgccgaggatgacgaggatgctaagaaaatcgagagaaagaacagcgag
ctgacctttaatatcggaaagtgggttattaagcaagagaaacagaaagaaaaagaagga
aaaaagccacctgccgaggacgttcccccgccgccaagacccaaaatctccaagaacgat
gcaggtatttacgaggtcttcctgagggacgacagaggcaaagataagagcaccttcaat
ctgacggatgcaggataccaagctgtaatgaatgagctgttcagggttattgccaagtcc
tcctctgaaatcaaaattctcagtactgaacatggcatcatcctctactccatggtcaca
tattacaatgaggacctgcgtgttggttggctccacaaagatgctaagattgccgcctca
gagagggttaagtctggagtcacaggggagcagctttggcttaagatcaatgagcccact
gagaaggacaagggcaaatacaccgtggacatctttgatggcaaggacggagtaaagaga
gtctttgatctgactggtcaggcatgggaagaggcatttgaagaattccaaaggctcaag
gcggcagcaattgcagagagaaaccgtgctcgtgttattggaggcttgccagatgtggtt
gcaatccaagagggcaagtccctgaacctgactggcaatgtctggggcgagcctgtgcca
gaggtaagctggataaagaacgacaaggagctggtgtccgacgagcgctacaaactcaag
ttcgagcatggcaagtttgccagcatcacaatcgccaccgtcaccacgtctgactctggc
aaatacgccctcctggtcaagaacaagtacggcacagaggctggcgagttcaccgtcagt
gtctacaacccagatgacgaggagaacaaggaggagaagaaaggctaa
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integrated database retrieval system
