Siniperca chuatsi (mandarin fish): 122887709
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Entry
122887709 CDS
T08948
Name
(RefSeq) E3 ubiquitin-protein ligase RNF43
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
122887709
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
schu04121
]
122887709
Enzymes [BR:
schu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122887709
Ubiquitin system [BR:
schu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122887709
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
zf_RING_Vps8_fungal
zf-C3HC4_3
PA
Motif
Other DBs
NCBI-GeneID:
122887709
NCBI-ProteinID:
XP_044077089
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All DBs
Position
LG14:6717922..6799703
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AA seq
816 aa
AA seq
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MTVPQRRLAGLWPWLLMAALQVVLGQPGLESERPALRAVIKVTLLNHEPTGKPITLEGVF
VGGSAGYAEGKLMQYHPLSLCNTSEDERQESDFITIVKLEHRVPRCLPLLDKARMALDKG
AQAVIFDVSDDANAAAELRETDSLPRPVVLVEAEDAEELMGLVNKNEEAKVRIEIMVEQP
RWPHYDVGILLTIVLAILTIVLIFAFRYKCKSSRTWDSVHQQTMRAISRLETKTYSSQGC
SGSQRHRAAWGSASSSNSSPVCAICLEEFQDGQHLRIISCAHEFHKDCVDPWLLQHRTCP
LCMHNIMGTERQPQRNRLQQSPEQSQGFLHAPPYSSPRNHPFPQHAIPFSMRPHYPRGPS
GPYPSLGHYTGSSPRDTQRLRFLSSRPLGSGCGYHLAAEVPGRPHRIGGNCRTHHYNSRR
SCHNYRSSCPAQRSASSSRLHHIASITPQTRGVPAHSRQDEGSCSGGSYHTERSGYLADG
PASDSSSGPCHGSSSDSVLNCTDVSLQGVYGSWSTFRSSLSSDYDPFVYYGPGSGRAPRR
NSLEACAQARPRSLDSVVNKAGCPEEQPQTVLSHIHYHRHRHHHYEEGERSQGPSRGSDE
EHGAAAAAAAPAAPVLDKDSPVCPPKHSHCQCPKPDPIDRPSPGTEYQDHDPSSPTGPPV
LVSPIPLQLQPHCCHQGHGHPPAPLGRVGGCVLDGPSVRFHQSLDLQDDRSIHIHYGQGP
GFCCSPPELHPALLPVPLILDSGGMEDWPCCAGAHVVWQKRVQQARSEPQLLGPGTSMDR
PPCRFHHGPAADHNTDICLYCQTLHHNQGSEEESGV
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtcccccagcggcgcctggccgggctctggccgtggctgctcatggcggccctg
caggtggtgctgggccagccgggcctggagtccgagcggccggccctccgagcggtcatc
aaggtgacattgctgaatcacgagccgacggggaagcccatcactctggaaggggtgttc
gtcggaggaagtgccggctacgcggagggaaaactaatgcagtatcaccctctgtctctg
tgcaacacaagcgaggatgaacggcaagagagtgactttatcaccattgtcaaactggag
cacagggtaccccgctgtctgccgctgctcgataaggctcgcatggcactggataaagga
gctcaggctgttatctttgatgtcagtgatgatgccaatgctgctgctgagctgcgagaa
acagactcccttcctcgtccagtcgtgctggtggaggcggaggatgctgaggagttgatg
ggtttggtcaacaagaacgaggaggccaaagttcgtattgagatcatggtggagcagcct
agatggccacattatgatgtgggaatcctgctcaccatcgtccttgctattctgaccatt
gtcctaatcttcgctttccgctacaagtgcaagtccagcagaacctgggactctgtccat
cagcagaccatgagggctattagtcgattggagaccaaaacctacagctctcagggctgc
tcaggctctcagcgccaccgtgcggcctgggggtcagccagcagctccaactcgagccct
gtctgcgctatctgcctggaggagttccaggacgggcagcatttaaggatcatctcctgt
gctcatgagttccacaaagactgcgtcgacccctggctgctacaacaccgcacctgtccc
ctctgcatgcacaacatcatggggacggagcggcagccccagaggaacagactccagcag
agtccagagcaaagccagggtttcctgcacgctccgccttacagcagcccacgcaaccac
cccttcccccagcatgccatccccttctctatgaggccccactatcctcgtggaccctct
ggaccctatccctctctgggtcactacactggctcttctcccagagatacccaaaggcta
cgtttcctgtccagcaggcctcttggctctggctgtgggtaccaccttgctgcagaggtt
cccgggaggccccacaggattggaggtaactgcaggacccaccactacaactcccgtagg
tcctgccacaactatcgctcatcctgtccggcccagcgcagtgcatccagctcaagactg
caccacatcgcctccatcacaccgcagacccgcggagttccggcccacagccggcaggac
gaaggcagctgctcaggtggcagctaccacacagaacgcagcggatacttggctgatggg
ccagcgagtgactccagttcagggccatgccatggctcctccagcgactcagttctcaac
tgtactgacgtgtccctgcagggggtttatggcagctggtccaccttccgtagctctctg
agtagtgactacgatccgtttgtgtattatgggccaggttctgggcgtgccccccgcagg
aacagcctggaggcatgtgcacaggcccggcccaggtctctggattctgtggtgaacaaa
gcaggctgccccgaagaacagccgcagactgtgttaagccacatccactaccaccgccac
agacaccaccactatgaggagggggagcgcagccagggcccgagcagaggctcagatgag
gagcacggggcagctgctgctgcagctgcacctgctgctcctgtcctggacaaagactca
cctgtgtgccctcctaagcacagccattgccagtgcccaaagccagaccccatagatcgg
cccagtcctgggacagagtatcaggaccatgaccccagcagccctacaggaccacctgtc
ctggtgtccccaatccccttacagcttcaaccccactgctgccaccagggacacggacac
cctcccgctcctcttgggcgagtgggtggctgtgtgcttgatggcccctctgttcgcttc
caccagagcctggatctgcaggatgaccgtagcatccacatccactacggtcagggccca
ggcttctgctgctctcctcctgagctgcaccctgccttgctccccgtgcccctcattctg
gactctggaggtatggaggactggccttgctgtgccggggcccatgttgtgtggcaaaag
cgggtgcagcaggcacgctcagagcctcagctcttggggcctgggacctctatggacagg
ccaccctgcaggttccaccacggccctgctgctgaccacaacacagacatttgtttgtac
tgccaaacattacaccacaatcagggatcagaagaggagtctggtgtgtga
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