Siniperca chuatsi (mandarin fish): 122887811
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Entry
122887811 CDS
T08948
Symbol
zgc:163098
Name
(RefSeq) U2 snRNP-associated SURP motif-containing protein isoform X1
KO
K12842
U2-associated protein SR140
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122887811 (zgc:163098)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
schu03041
]
122887811 (zgc:163098)
Spliceosome [BR:
schu03041
]
Complex A
U2 snRNP components
U2 related factors
122887811 (zgc:163098)
Complex B
122887811 (zgc:163098)
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Paralog
GFIT
Motif
Pfam:
Surp
RRM_1
CID
cwf21
CTK3
SET_assoc
Motif
Other DBs
NCBI-GeneID:
122887811
NCBI-ProteinID:
XP_044077289
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Position
LG14:complement(11628262..11639020)
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AA seq
931 aa
AA seq
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MNICEQHTETDSFVIVRTGQASSLRSASRISRLLIACCDRNQLPSQAKCLSMADRKGKPV
TPIKTLTKKEQEELKKKEEEKAAEVFEEFLASFETSEKSGVKTFVRGGIVNATKEEEAEE
VKKSKLYRPATKLVPVSQHVSPVSSAESKKSTFKRKTEEKKKSNLELFKEELKLIQEERE
ERYKRKKNDPGGGGGGYGDLDIPSGRSTLYDDLTVPTTTNLYISCISPKMNEEMLCKEFG
KYGPLASVKIMWPRTDEERCRTSNRAFVAFMTRKDAERALAALDGKVIMGFEMKLGWGKP
ARIPPQPLYTPVGVRATPPPPSGLPFNAQPRDRFRNDFTKPLGMSKGELDKSLSEAVVKV
VIPTERNLLFLIHRMIEFVVREGHVFEAVIMNKEKNNPDYRFLFDNKSQDHVYYRWKLFS
ILQGESPTEWRTTDFRMFRGGSIWRPPFLNNYSQGGEDGAEVEEDASPEEEVKKGQLRAE
HRQRLETLLKELTPSREDIANAMLFCLERADAAEEVVGHITESFSLLQTPLQQKIARLYL
VSDILYNSCAKVAGASYYRKYFETKLTQIFEDLNAAHKNIQARLQAEQFKQKVTSCFRAW
EDWAIYPEPYLIHLQNIFLGFAKAVEESTETAEEVSSYLDGAPMDSTPLGGLPLNRAPMD
DLDGCPMGWDPLDGVPVDDIDGVPLGVAIDDIDGMPLDESNVPLSGVPLSKWEKTGDTGA
FSQAKTESKWDMVVEQDSEDEVNVSVNSQDGDEDSESDSTDDSCSLSKYDSADFQSSLRS
FQMSESKRKRLRELEVKVMKNQDELESGKRQRKSGMSIQQQVEHYRNKLLQKEFEKDEEK
NETLTSKSKDKSKDDKRDKERSKKSDDGDRRRRWSRDPDDRTRKSTSISPLKTRSPKWSK
RSRSPSPDQKAGKSRSRSPHRFHKKTKKSKH
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atgaatatatgcgagcagcacacagagacagactcatttgttatcgtgcggaccgggcag
gcgtcctcgctgcggagcgccagtcggatatctcgcctcctgatagcatgttgtgataga
aatcaattgccgtcgcaagcaaaatgtttgagcatggcagatagaaagggaaaacctgtc
actccaatcaaaacactcacaaaaaaagaacaagaagagctcaagaaaaaggaggaagaa
aaagcagcagaggtttttgaagaattcttggcgtcatttgagacgagtgagaaaagcgga
gtgaaaacctttgtccgtgggggaatcgtgaatgcaactaaagaggaggaagcagaagag
gtcaagaaaagtaagctgtatcgacctgctacgaagttagtccccgtgtcccagcatgtc
tcaccagtatcatctgctgaaagcaaaaagtctacatttaaaagaaagacagaagaaaag
aagaagagtaatcttgaactcttcaaagaagaacttaagctaatacaagaagagcgcgag
gaaagatataaaaggaaaaaaaatgaccctggcggaggaggaggaggatatggagatctt
gacataccgtcaggacgttcaacattatatgatgacctaacagtgccaaccaccactaac
ctctacataagctgcattagcccaaagatgaacgaggagatgctctgcaaagagtttggt
aagtatggtcccctggccagtgtgaagattatgtggccccgaacagacgaggagcgctgc
aggacctccaacagagcctttgtagctttcatgacacggaaagatgcagagagagccttg
gctgcacttgatggaaaagtgattatggggtttgaaatgaagctgggatggggtaaacca
gctcgcattccaccccagcctctctacacaccagtgggggtgagggccacaccgccaccc
ccatctggtctgcctttcaatgctcagccaagggatcgcttccgcaatgacttcaccaag
ccgctgggcatgtccaaaggggagcttgacaagagtctgtccgaagccgtagtcaaagtg
gtaatcccaaccgaaaggaatctattattccttattcacaggatgatagagtttgtggtg
cgtgaaggccatgtttttgaagccgtaataatgaacaaggagaaaaacaatccagattat
aggttcctttttgacaacaaaagccaagatcatgtgtactatcgctggaaactgttctcc
atcctccagggagagtccccaacagagtggaggaccacagattttcgtatgttccgggga
ggctctatatggagaccccctttcctaaacaactactctcaaggaggtgaagatggggca
gaggtagaggaggatgcttcccctgaggaggaggtgaagaaagggcagctcagagctgag
cacaggcagaggctggagacattgcttaaagagcttactccaagcagagaagatattgcc
aatgctatgctgttctgtctcgagcgggcagatgcagcagaggaagtagtgggacatatc
acagagtctttttccttgcttcagacgccccttcagcagaagattgccagattatatctt
gtgtcagacatcttgtacaactcatgtgccaaagtagccggtgcatcatattatcgtaaa
tattttgaaacaaagctaacacagatatttgaagaccttaatgcagcgcacaaaaacata
caagccaggctgcaggctgaacagtttaagcaaaaggtcaccagttgttttagagcttgg
gaagactgggccatatacccagagccttatctaatccatcttcaaaacatctttctgggc
ttcgccaaagcagtggaggagtcgacagagacagcagaggaagtatcttcctatctcgat
ggtgcgccaatggacagcacacctctaggtgggttacctttgaacagagctcctatggat
gacctcgacggctgccccatgggctgggaccctctggatggagtccctgttgatgacata
gacggtgttcccttaggagtagccattgatgacattgatggaatgcccttggatgagagc
aatgttcccctctcaggagtgcctttgtctaagtgggagaagacaggtgatactggggca
ttttcccaagccaagaccgagtcgaagtgggacatggtggtggagcaagacagtgaggac
gaagtaaatgtaagtgtcaactcacaggatggagatgaggactcagagagtgacagtact
gatgactcctgcagtttgtccaaatatgacagtgcagacttccagagctccctcagaagt
tttcagatgtctgagagcaaaaggaaaaggctgagagagctggaggtaaaagttatgaag
aaccaagatgagctggaatctggcaagaggcagaggaagtctgggatgagtatacaacaa
caagtggagcactacaggaacaaactgctacagaaggagtttgaaaaagatgaagaaaag
aatgagacattgacatcaaagtctaaagacaagtcaaaggatgacaaaagggacaaagaa
aggagcaaaaaaagtgatgacggggacagaagacgacgatggagtagagatcctgatgac
cggacccgaaaatcaacgagcatctcccctttaaagacacggtctcctaaatggtctaaa
cgttcccgatcaccatcacccgaccagaaggcaggcaagtccaggtcacggtcaccacat
cgcttccacaagaagacaaagaagagcaaacattga
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