Siniperca chuatsi (mandarin fish): 122887855
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Entry
122887855 CDS
T08948
Symbol
cnot8
Name
(RefSeq) CCR4-NOT transcription complex subunit 8
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122887855 (cnot8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
schu03019
]
122887855 (cnot8)
Messenger RNA biogenesis [BR:
schu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
122887855 (cnot8)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
122887855 (cnot8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
122887855
NCBI-ProteinID:
XP_044077409
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All DBs
Position
LG14:26546157..26552584
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AA seq
285 aa
AA seq
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MPAALTDSSQIICEVWASNVEEEMRKIRQIIQSYNYIAMDTEFPGVVVRPIGEFRSTVDY
QYQLLRCNVDLLKIIQLGLTFMNEDGDYPPGTTTWQFNFKFNLTEDMYSQDSIDLLQNSG
LQFKKHEEEGIDTLYFAELLMTSGLVLCENVKWLSFHSGYDFGYLVKLLTDARLPEEEHD
FFQILNLFFPAIYDVKYLMKSCKNLKGGLQEVADQLELKRIGRQHQAGSDSLLTGMAFFR
MKELFFEDNIDDAKYCGRLYGLGSGSSQPQNGISSSGQEETNNKH
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgccagccgcacttacagattccagtcagataatctgtgaagtctgggcaagcaatgtg
gaggaggaaatgaggaaaatccggcagattattcaaagctacaattacattgccatggac
acagaattccctggagtggttgtccggccaatcggcgagtttcgcagcacagtggactac
cagtaccagctgctgaggtgtaacgtggacctcctgaagatcatccagcttggcctcacg
ttcatgaacgaggatggagactatcctcctggcactacgacgtggcagttcaacttcaag
ttcaacctcacagaagacatgtactcacaggactccatagacctacttcagaactccggc
ctccagtttaaaaaacacgaagaagagggaattgacacgctctacttcgctgagctcctc
atgacgtctggtttggtgctgtgtgaaaacgtcaagtggctctccttccacagcggctac
gacttcggctacctggtgaaactcctgacagacgcacggctccccgaggaggaacatgac
ttcttccagatcctcaacctgttcttccccgcaatctatgatgtaaagtacttgatgaag
agctgcaagaacctaaagggagggctacaggaagtagcagaccagctggagctgaagagg
atcgggcgtcagcatcaggctggatcagactcgctgctcaccggcatggctttcttcagg
atgaaagagcttttcttcgaagacaacattgatgatgcaaagtattgtgggagattgtac
ggcctgggctcgggctccagccaaccccagaacggcatctccagctcgggtcaggaggag
acgaataacaagcactga
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