Siniperca chuatsi (mandarin fish): 122888005
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Entry
122888005 CDS
T08948
Name
(RefSeq) claudin-4-like
KO
K06087
claudin
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu03272
Virion - Hepatitis viruses
schu04382
Cornified envelope formation
schu04514
Cell adhesion molecule (CAM) interaction
schu04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
122888005
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
122888005
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
122888005
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
122888005
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
schu03037
]
122888005
04147 Exosome [BR:
schu04147
]
122888005
Cilium and associated proteins [BR:
schu03037
]
Other cilia and associated proteins
Stereociliary proteins
122888005
Exosome [BR:
schu04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
122888005
Exosomal proteins of colorectal cancer cells
122888005
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Trp_oprn_chp
Motif
Other DBs
NCBI-GeneID:
122888005
NCBI-ProteinID:
XP_044077746
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All DBs
Position
LG14:16257094..16270866
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AA seq
392 aa
AA seq
DB search
MASLGLQILGVGLAVLGWIGNILICMLPLWKVSAFIGNNIVVAQTIWEGLWMTCVVQSTG
QMQCKVYDSLLALPPDLQAARAMVVIAILFSLFGLLLSVVGGKCTTCIGDKVAKARVAIS
AGVFFILSGALCLVTVSLPANTIIKDFYNPMVPDAQRRELGAGRLSGCTMVSFGLELVGV
ILSVLGWVLSVISCSLPMWRVSAFIGANIVTAQVYWEGLWMSCVFQSTGQMQCKVYDSML
ALPPDLQAARALTIVSIVVGVVALLIAMVGAKCTNCIEDDGVKARVMASSGGAFITAALA
QLVPVSWSAHTIIVEFYSPIIPSGQKMEIGAALYLGWAAAALLLIGGSILCCSCPPQEEK
SMRYSAHPQSRIAYSAAPRSTAQSSYNRKDYV
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atggcatctttaggactgcagattttgggcgtcgggctggcagtgcttggatggattgga
aacatactgatctgtatgctgccactgtggaaggtgtctgctttcattgggaacaacatc
gtggtggctcagaccatctgggaaggactgtggatgacctgtgtggtgcagagcacaggt
cagatgcagtgcaaggtctacgactccctgctggccctgcctccggacctccaggcagct
cgggctatggtggtcatcgccatcctgttctctctgttcggcctgctgctctctgtggta
ggagggaaatgcaccacctgcattggggataaggtggcaaaagccagagtggctatctcc
gcaggtgttttcttcatcctgagtggggctctgtgtctggtgaccgtgtctctgcctgct
aacactatcataaaggacttctacaaccccatggttcctgacgcccagaggagggagctg
ggtgcgggacgtctgtctggttgcacgatggtgtcttttggacttgaactggtcggcgtc
attctgtcagtgctcggctgggtgctgagtgtaatcagctgctccttgccgatgtggagg
gtttccgccttcattggcgccaatattgtcacagctcaggtgtactgggagggcctgtgg
atgagctgcgtgttccagagcacagggcagatgcagtgtaaggtctacgactccatgctg
gctttacctccagacctgcaggccgccagggcgctcaccatcgtctccatcgtcgtggga
gtagtggctctcctcatcgctatggtgggagcaaagtgtaccaattgcatcgaggatgac
ggggttaaagccagggtgatggcctcctcgggcggggcgttcatcacagcagctctggcc
cagctggtgcccgtttcctggtcagcacacaccatcatagttgagttttacagtccaatc
atcccctctggtcagaagatggagatcggggcggcgctgtatctgggttgggccgcagca
gccctgctgctgattggagggtccattctctgctgcagttgccctccacaggaggagaaa
tcaatgaggtacagcgcgcaccctcagagtcgtatagcatactccgccgcaccaaggtca
actgctcaaagctcctacaacaggaaggactacgtgtga
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