Siniperca chuatsi (mandarin fish): 122888006
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Entry
122888006 CDS
T08948
Name
(RefSeq) thrombospondin type-1 domain-containing protein 1 isoform X1
KO
K24433
thrombospondin type-1 domain-containing protein 1
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
schu04990
]
122888006
Domain-containing proteins not elsewhere classified [BR:
schu04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
122888006
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
THSD1_N
THSD1_D3
THSD1_D2
TSP_1
TSP1_spondin
TSP1_ADAMTS
TSP1_CFP_C
TSP1_CCN
Motif
Other DBs
NCBI-GeneID:
122888006
NCBI-ProteinID:
XP_044077747
LinkDB
All DBs
Position
LG14:14066552..14076689
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AA seq
956 aa
AA seq
DB search
MPQAVSLLPFLLALMGYAFAGLNIWPSFHVALSNASVFVDFSTKSNSSTIRSTSLSLVNT
ETNTTLLTRTLPNNQSAGRVEFNCSCFLYAGTFRFLLRQTSISAVSHANGTDDSSTESTS
WWWSSELQVQWPTFHIAVERAGNHSGSFQVGMSTNEHFQACSSGIDSALFLEVSYIEYNQ
IGRNSIDKVRARTRHSIKPLRSQSVEVSCAFPFTERDFIRVALRSPHAAQDVKSSGPLYL
SRVFSYKLLVENANTYRSGCEGTMTVKLITPPCAHINGKVLLYKDGGVGRAVAVSSGIGA
SGTALIGFGPEELSSPPLAFNWLTQGENETEFNCSVFYPGRNKYCFRFLFNFSRSPSPAQ
TCLVVHRSAVSWGPWQSWSVCSVSCGEGVRERVRECLLPSGVGGMQCTGMVKEQSLCSLE
DCVVLPAPSPSLPHVPVGVAPLGGNMVVVAGISLCLAVILATVVVTVWRKLCQTPPCSSV
RRGSMHSPGGRKLSDEASICGHSLQRPSLSDAHGPPGGMSVGVAQKDTPFLGSQPLSQTL
VIPVSQDPERLSPTGQKLLPPIFGYRLAQQQLKEMKKKGLKEATQLYHVSSSPVHDTLVE
TSASPTNSPIPTQTGVAHSTLPSSLQDDANYSHFCIAAPFSEPRLQTSRVTPDRLSPRVE
LVLGPLVSAHASGGSSKWRDRTADWVEMVERSGLTGLRGGGGDVGMGNSYHKNPNFRRTS
SFNDTKPQPPPSAHSRQFRERSMTQVGSRTLPEGSCWTKGGWERQPYRSYPIPEHGALEW
AKSRPQRNDQRKTWIETAVPSHNNELKHTGTNTNGLSASEKHAKADLSGTGERQRSGETG
GGGGISGIGGPAAGPDSLSVDRVERAEQNWNRRGPSPIQRNILARKLKEAQSCSGVKGRQ
RSSTFSVSSSEQRKGRCHSLPMSGDYSSSSGSPYRLSEAEQRMLDLDLSSYVGEEE
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atgccacaggctgtctcattgctgcccttcctgctggcgctcatgggatatgcttttgca
gggctcaatatctggccttccttccatgttgcccttagcaacgccagtgtatttgtggac
ttcagcacaaaatccaacagcagcaccatccgcagcacgagcctctctctggtcaacacg
gaaaccaacaccacccttctgaccaggactctacccaacaaccaatcggccggtagggtg
gagttcaactgctcttgcttcctgtatgcaggaactttccggttcctgctgaggcaaacc
agcatctctgctgtttctcatgctaatggcaccgacgatagtagcacagagagcaccagc
tggtggtggagttccgaactgcaggtgcagtggcccacctttcacatcgctgtggagagg
gccggaaaccactcaggatcttttcaggttgggatgtccactaatgaacactttcaggct
tgctctagtggcattgactctgctctcttcctagaagtcagctacatagaatacaaccag
atagggcgaaacagcatcgacaaggtccgagcccgcactcgacactcaatcaaacccctc
cgttcccagagtgttgaggtgtcctgcgctttccccttcacagaaagagactttatacga
gtggctctacggtctcctcatgcagcacaggatgtgaagagctctggacctctttacctg
tcccgtgtcttctcctataagcttctggtggaaaacgccaacacttacaggagtggttgt
gaagggactatgactgttaaactgataaccccaccttgtgctcacatcaatgggaaagta
ttgctgtataaggatggaggcgttggaagagcggttgctgtttcctctggaattggagca
agtggaacagcactgatagggtttggaccagaagagctgtcttctcctccgttggctttt
aactggctgactcagggagagaatgagacagaattcaactgttctgtattttacccagga
aggaacaagtactgctttcgctttcttttcaacttcagtcgctcccctagtcctgcacag
acctgtttggtggttcacaggagtgcagtgtcatggggcccatggcagtcgtggagtgtg
tgcagtgtgagctgtggagagggggtgagggaacgagtgcgtgagtgtttgctgccctca
ggtgtgggagggatgcagtgcactggcatggtgaaagagcaatccctctgctcactggag
gactgtgttgtgttgcctgcaccttctccatccctcccccatgtgcctgtcggagttgca
cccctcggtggtaacatggtcgtggtggctggtatctccctttgcctggctgtgattctg
gctactgttgtggtgactgtgtggagaaagctttgccagacccctccatgcagctctgtc
cgcagaggctccatgcattcccccggaggacgcaagctctccgatgaggcctccatttgt
ggccacagcctccagagacccagcctgtctgatgcccatggcccaccagggggcatgagt
gtgggtgtagcccagaaagacactcctttcctgggcagtcagcctctctcacagaccctg
gtgatacctgtctcacaggacccagaaaggctgtcccccacaggtcagaagttgttgcca
ccaatatttgggtaccgattggctcagcagcagttgaaagaaatgaagaaaaaggggtta
aaggaggccacacagttgtaccatgtctcctcaagcccagtccatgataccctggtagag
acatctgcttcccctaccaactcgcccatccctacacaaactggagttgctcattccact
ctcccttcatccctccaggacgacgccaactacagccatttttgtattgcagctcccttt
tctgagccacgattgcagacttctagggtcacgccggacagactgagtcccagagtggag
ctggtcttaggccctcttgtctctgctcatgcaagtgggggcagctcaaaatggcgtgac
cgcaccgctgactgggtggagatggtagagagaagtgggttaacaggtctcagaggaggg
ggaggagatgtaggaatgggaaactcctatcataagaatccaaatttccgcaggacctcc
agttttaatgacaccaaaccccagcctccaccctctgcacactccagacagttcagagaa
aggagcatgactcaggtgggatctcggacccttcctgaaggaagttgttggaccaaagga
ggatgggagaggcagccataccgctcttaccctattccagagcatggggccttagagtgg
gctaaatccagacctcaaagaaatgaccagaggaagacctggatagagacagctgttcct
tctcacaataatgaactcaagcacacaggaaccaacacaaacggcctttcagcatctgag
aaacatgctaaagcagacctcagtggcactggggaaaggcaaaggagtggtgagacagga
ggtggagggggaatctcagggattgggggtccagcagcggggcctgacagcctgagtgtg
gatcgtgtagagcgggctgaacagaactggaaccgtcgcggcccatcgcctatccagagg
aacatcctggcccggaaattaaaggaggctcagtcttgctctggggtcaagggacggcag
cgcagctccacctttagtgtatcatcctcggagcagaggaaaggtcgctgccactctctg
ccaatgtctggagactacagcagcagtagcggctcgccctacaggctaagtgaggcagag
cagaggatgttggacctagatctgtcctcatatgtaggggaggaggagtag
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