Siniperca chuatsi (mandarin fish): 122888010
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Entry
122888010 CDS
T08948
Symbol
vps36
Name
(RefSeq) vacuolar protein-sorting-associated protein 36
KO
K12190
ESCRT-II complex subunit VPS36
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
122888010 (vps36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
schu04131
]
122888010 (vps36)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
schu04147
]
122888010 (vps36)
Membrane trafficking [BR:
schu04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
122888010 (vps36)
Exosome [BR:
schu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
122888010 (vps36)
Exosomal proteins of colorectal cancer cells
122888010 (vps36)
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Paralog
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
Xre-like-HTH
NAI2_C
Ribonuc_red_lgC
TssO
Motif
Other DBs
NCBI-GeneID:
122888010
NCBI-ProteinID:
XP_044077760
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All DBs
Position
LG14:14060061..14066324
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AA seq
382 aa
AA seq
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MDRFSWSNGLLEINETLVIQQRGVRLYDGDDKAKLDVGVALLSTHRLIWRDVKSHECCIA
MPLSQIIFFEEQAAGIGKSAKIVIHLHATPGNKEPGPYQHSKYSFIKLSFKEHGQIEFYR
RLTEEMTQKRWENTPVSQPIPTGTGSQAGRVRAVGIVGIERKIEEKRKETDKNISEAFED
LSKLMVKAKEMVELSRSIASKIKDKQGDITEDETIRFKSYLLSMGIADPVTRETHGSGTH
YHLQLAKQLGDMLQAPLEERGGMMALTEVYCLVNRARGMELLSPEDLVNACKMFVSLKLP
LRLRVFDSGVMVVQLQSHSEEEMIASALDNVSDKGSLTAEEFAKLLGLSVLLSKERLLLA
EKMGHLCRDDSVEGLRFYPNLF
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atggaccgcttttcgtggtcaaatgggctcttagaaataaacgaaactttagtgatccag
caacgaggtgtcagactgtatgacggtgatgataaggctaagctggatgttggagttgcc
ttgttgagcacccatcggttgatatggagggacgttaaaagtcatgaatgttgcatagcc
atgcccctgtcacagatcatcttctttgaggagcaggctgcaggaataggaaagagtgca
aaaatagttatccacctgcacgcaacacctggcaacaaggagccaggtccctaccaacac
agcaagtactccttcatcaagctgtccttcaaagaacatgggcagattgagttttacagg
aggctaacagaggaaatgactcagaagagatgggagaatacaccagtttcccaacccatc
cccacaggaaccggctctcaggcaggaagggtccgtgcagtggggattgttggcattgag
aggaagatagaggagaagaggaaagaaacagacaaaaacatttctgaggcctttgaggac
ctcagtaagctaatggtgaaggccaaagagatggtggagctgtccagatctatagccagt
aagatcaaagacaagcagggagacataacagaagacgagacaatccggtttaagtcctac
ctactgagcatgggtattgctgaccctgttaccagagaaacacatggatcaggtacacat
taccatttgcagctggctaagcaactgggagatatgctacaggccccactagaggagcgt
gggggtatgatggctctcactgaggtgtactgtcttgtcaaccgtgctagagggatggag
cttttatcaccagaagatttagtaaacgcatgcaagatgtttgtatcattgaagctcccg
ttgaggctgcgtgtgtttgacagtggtgtgatggtggtccagctgcagtctcacagcgaa
gaggaaatgatagcctcagcactggacaatgtgtcagacaaaggctctttgacagcagag
gagtttgcaaagctcttgggtctctctgttcttctgtctaaagagcggttgttgctggct
gagaagatgggccacctgtgtagggatgactctgttgagggtttgagattctacccaaac
ctcttttga
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