Siniperca chuatsi (mandarin fish): 122888018
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Entry
122888018 CDS
T08948
Symbol
rpn2
Name
(RefSeq) dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 isoform X1
KO
K12667
dolichyl-diphosphooligosaccharide---protein glycosyltransferase subunit 2 (ribophorin II)
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu00510
N-Glycan biosynthesis
schu00513
Various types of N-glycan biosynthesis
schu01100
Metabolic pathways
schu04141
Protein processing in endoplasmic reticulum
Module
schu_M00072
N-glycosylation by oligosaccharyltransferase
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
122888018 (rpn2)
00513 Various types of N-glycan biosynthesis
122888018 (rpn2)
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
122888018 (rpn2)
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Motif
Pfam:
Ribophorin_II
Ribophorin_II_3rd
Ribophorin_II_C
Ribophorin_II_2nd
DUF5859
Motif
Other DBs
NCBI-GeneID:
122888018
NCBI-ProteinID:
XP_044077780
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Position
LG2:complement(29133424..29144314)
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AA seq
643 aa
AA seq
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MDQPSLFGLFLLILALSGAQALTPAHYLSLSDVARLQNLLRQQFTDLESSYYSVVGLTKL
GATVPDHKEVCQFLKSQLDPTSVDSLFFAAETSQAISGCEIPVSNETRDILLAAVSEDST
MTQIHRAVSTLSSLGLPLASQEVVGALTARINKEDNVMAITSALQTAARLSQQAELGGIL
EEIEDLTARLDDLGGIYLQFEEGLEATAMFVSAAYSLSDHVDMEPPLKEDQVIQLVNSIF
SKKSWDSLAEAFSVASAAAALSNNRFHVPVIVSAQGPATVSHSQPTLQLLVTDVMSQPLA
SANVLVESAYAVASKSIILSQEPFTLNDGIFELNFMSNQPASGYYQFTVAVKGDSRLVAN
HVELKVKVSTEVAVTNMDLSVVDKDQSIGTKTTRVDYPSKAKSSFTADSHQNFAMSFQLV
DVNTGVELTPHQTFVRLHNQKTGQEVVFVAEPDSKNLYKFELDTAERKSEFDSISGTYSL
YLIVGDATLENPILWNVADVVLKFVDEEAPATIQPKTLYVPKPEIQHLFREPEKKPPTVV
SNTFTALILSPFLLLLILWFKLGANISNFSFSPSTILFHVGHAAMLGLMYVYWTHLDMFQ
TLKYLAIIGGVTFLAGNRMLAQKAVKRIATEQSSRLAKYRSLR
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atggaccagcctagtctgttcgggttgttcctcctcatcttggctctttctggagctcag
gcgctcacaccggcgcactacctctccctgtctgatgtggcccgactgcagaacctcctg
cgccaacaattcaccgacctggagtcctcatactactctgttgttggtctgaccaagctt
ggagcaactgttccagatcacaaggaagtatgccagttcctcaaatcccagcttgatccc
actagtgttgactcactcttctttgctgctgagaccagtcaagccatttcaggatgtgaa
atccctgtatcaaatgaaacccgtgacatcctcctggcagcagttagtgaagattcgacc
atgactcagattcatcgggccgtgagcacactcagctctctggggcttccactggcttcc
caggaagttgtaggtgccttgacagctcgcatcaacaaggaggacaatgttatggctatc
acttcagctctgcaaacagcagcccgtctgtcccagcaggcagaacttggaggaatactt
gaagaaattgaggatctgacagctcgtttggatgatcttggtggtatctacctccagttt
gaagagggacttgaggcgactgccatgtttgtgagcgctgcttattccctatcagatcac
gtggacatggaacctcccctgaaggaggaccaggtcatccagctggtgaactctatcttc
agcaagaaatcctgggattctctggctgaggccttcagtgtggcaagtgctgctgctgct
ctctccaacaaccgcttccatgtgccggtcattgtcagtgctcagggcccagccacagtg
tcccacagccagccaaccctgcagctgcttgttactgatgtcatgtctcaacctctggcc
tcagccaatgtgctggtagagtctgcgtacgctgtggcgtccaagagcatcatactcagc
caagaacctttcacacttaatgatggcatctttgaactgaacttcatgtccaaccagcca
gccagtggatattatcagtttaccgttgcagtgaaaggggatagccggctggttgccaat
catgttgagcttaaagtgaaggtgtccactgaggtggctgtcactaacatggacctctct
gtggtggataaagaccagagcatcggcacaaagaccaccagggtggactatccttccaaa
gccaagagctcctttacagcagacagccaccaaaactttgctatgtccttccagctggtt
gacgtcaacactggagtggagcttacccctcaccagacttttgtccggctgcacaatcag
aaaactggccaagaggttgtgtttgtggctgaacccgacagcaaaaatctgtacaagttt
gagttggacacagcagaacggaaatcagagtttgactccatctctggtacctattccctc
tacctcattgttggggacgctaccttggagaatcccatcttgtggaatgtggctgatgtt
gttctgaagtttgtggatgaggaggccccagctaccattcagcccaagactctttatgta
cccaaaccagagatccagcacttattcagggaaccagagaagaagcctcccacggtggtt
tccaataccttcactgcactcatcctgtctcccttcctgcttctgctcatcctgtggttt
aagctcggagccaacatctccaacttcagcttctctcccagcaccattctgttccatgta
ggacatgcagccatgctgggcctgatgtacgtctactggacccacctggacatgttccag
actctgaagtacctggcgattattggtggtgtaactttcctcgctgggaaccgcatgctt
gcccagaaagcagtgaagaggattgccacagagcaaagtagtaggttggcaaagtatagg
agcctacgataa
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