Siniperca chuatsi (mandarin fish): 122888065
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Entry
122888065 CDS
T08948
Symbol
gabra1
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-1 isoform X1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04080
Neuroactive ligand-receptor interaction
schu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
122888065 (gabra1)
04082 Neuroactive ligand signaling
122888065 (gabra1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
schu04040
]
122888065 (gabra1)
Ion channels [BR:
schu04040
]
Ligand-gated channels
GABA-A
122888065 (gabra1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
122888065
NCBI-ProteinID:
XP_044077913
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Position
LG14:complement(18953523..18983917)
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AA seq
490 aa
AA seq
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MSPDSHTLTVHLGASQASSRAVKGPHIATMCGRSRTAFLCLWACLLVANSVLGGKSSGQN
GMTDEQKDNTTVFTKILDSLLDGYDNRLRPGLGERVTEVKTDIFVTSIGPVSDHDMEYTI
DVFFRQSWKDERLKFKGPMAVLRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRIT
EEGTLLYTMRLTVRAECPMHLEDFPMDAHACPLKFGSYAYTRAEVVYVWTRGAAQSVVVA
EDGSRLNQYDLMGQSVDSGVVQSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQ
VSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALI
EFATVNYFTKRGYAWDGKSVVPEKQKKKKESLLKKNNTTAYPAATATAFAPNIARDPGLA
TIAKSAPPPPTEPKEEPKPKPPEAKKTFNSVSKIDRIARIAFPLLFGTFNLVYWATYLNK
KPKLQGMNPH
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgtctcccgactcccatacgctcacagtgcaccttggagcatcacaagcaagtagcagg
gcagtgaaaggtcctcatattgcaactatgtgtggacggagcaggacggcctttctgtgt
ctgtgggcttgcttgcttgtcgccaatagcgtactgggtgggaaaagctctgggcagaac
ggcatgacagatgaacagaaagataacactacagtgttcaccaagatcttagacagcctt
ctggatggctatgacaatcgcctcaggccaggactgggagagcgtgtaactgaagtcaag
actgacattttcgttactagtattgggccagtttcggaccatgacatggagtacaccatt
gatgtcttcttcagacagagttggaaagatgaaaggttaaagttcaaaggtcccatggct
gtgctacgtctcaacaacctgatggccagcaagatctggactcccgataccttcttccac
aatggcaaaaagtcagtggcccacaacatgaccatgccaaacaagctgctgcgaattaca
gaggaaggcacgctgctgtataccatgaggcttacagtaagagcagaatgtcccatgcac
ctggaagatttccctatggatgcccatgcttgtccactgaagtttggcagctatgcctac
actcgagcagaggtggtatatgtgtggaccagaggggctgctcagtcggtggtggtggca
gaggatgggtccagattaaaccagtacgatctgatggggcagagtgtggattctggtgta
gtgcagtccagcacaggagagtatgttgtgatgacaacccacttccacttgaagaggaaa
attggttactttgtcatccagacatatctaccctgcatcatgacagtcatcctctcccaa
gtgtctttctggctcaacagagagtccgtccctgccaggactgtctttggagtgaccact
gtcctgaccatgaccacactcagtatcagtgccaggaactctctccctaaagtggcttat
gccacagctatggactggttcatcgctgtctgctatgcctttgtcttctcggccctcatt
gagtttgccacagtcaactacttcaccaagaggggttatgcctgggatggaaaaagtgtg
gtgccagagaagcaaaagaagaagaaggagtccctcctcaagaagaacaacactacagcc
tatccagctgccactgctacagccttcgcccccaatattgccagggaccctggattggcc
actattgccaaaagcgccccaccacccccaactgagcccaaggaggagccaaagcccaag
cctccagaggccaagaagacctttaacagtgtgagcaagatagacaggattgccagaata
gccttccctctgctctttggaacttttaacttggtctactgggcaacctacttgaataag
aagcccaaattgcaggggatgaatccacactaa
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