Siniperca chuatsi (mandarin fish): 122888068
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Entry
122888068 CDS
T08948
Symbol
gabra6b
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-6
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04080
Neuroactive ligand-receptor interaction
schu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
122888068 (gabra6b)
04082 Neuroactive ligand signaling
122888068 (gabra6b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
schu04040
]
122888068 (gabra6b)
Ion channels [BR:
schu04040
]
Ligand-gated channels
GABA-A
122888068 (gabra6b)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
122888068
NCBI-ProteinID:
XP_044077928
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Position
LG14:complement(19021696..19057661)
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AA seq
476 aa
AA seq
DB search
MLILKVDQGFLVVGCLRGMAFLLTCLFLSCYSTSSVWGNQHSDTSIYLDNITRILDRLLD
GYDNRLRPGFGGPVTEVKTDIFVTSFGPVSDVEMEYTMDVFFRQTWIDERLKFEGPIEIL
RLNNLMVSKIWTPDTFFRNGKRSISHNMTTPNKLFRIMQNGTILYTMRLTINAECPMRLM
NFPMDGHACPLKFGSYAYPISEIVYTWKKGPLSSVEVPQESSSLLQYDLIGQTVSSERLK
SNTGEYVIMTVHFHLQRKMGFFLIQTYIPCIMTVILAQVSFWINKESVPARTVFGITTVL
TMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFSTLQANRELRKAAA
MKAAAQEAAAAAAAPAAATGNDGEVSSVDASSVLKKRMNSAPLFDRPAKTFPNPPVNAQA
FLQQGSAVPANNVLTGTSIIDKYSRILFPLSFGAFNLVYWIVYLTKDTMEMSRDTV
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgctgattttaaaagttgaccagggatttctagttgtggggtgtttgcgagggatggct
ttccttttaacttgcttatttctgtcttgttacagtacgagcagtgtttggggaaaccag
cacagtgacaccagtatatatttggataacatcacgcgtatattggatagattactggat
ggctatgacaacaggcttcgacctggatttggaggtccagttacagaggtcaaaactgac
atctttgtcaccagctttggacctgtttcagatgtcgagatggaatacaccatggacgtg
ttcttccgtcagacatggattgatgaacggctaaaatttgagggccccatcgagatcctg
cggctcaacaacctgatggtcagcaagatctggacgccggacacctttttccggaatggc
aagaggtcgatctctcacaacatgaccacccccaacaagctgttccgcatcatgcagaac
ggaactatcctctacaccatgagattaactataaatgcagagtgccccatgcgtctgatg
aacttcccgatggacggccatgcctgcccactcaagtttgggagttatgcttaccccatc
agcgagattgtgtacacttggaagaaaggtcctctttcctctgtggaggtgccacaggaa
tcatccagtttgctgcagtacgacctcatcggtcagaccgtgtcaagcgagaggctaaag
tccaatacaggtgaatatgtcatcatgactgtccacttccacctgcaaaggaaaatgggc
ttcttcctgattcagacttacatcccctgtattatgactgtcatcctggcccaagtctct
ttctggattaataaggaatcagttccagctcggactgtgtttggtatcaccactgtcttg
accatgacaacactcagtatcagcgcccgccactccctccccaaagtttcttatgccaca
gctatggattggttcatcgccgtttgctttgcctttgtcttctccgccctgattgagttt
gcggcggtcaactacttctccaccctgcaggccaaccgggagctgcggaaggcagcagcc
atgaaggcggcggctcaggaggcagcagctgcagctgcagctccggctgcagccacaggg
aacgatggagaggtttcctcagtggatgccagcagtgtgctgaagaagaggatgaactct
gccccgctgtttgaccgccctgccaaaacatttcctaacccacctgtcaatgcccaagcc
ttcctgcagcagggttcagctgtaccagccaacaatgttctgactggcaccagcatcatt
gacaaatactcccgcatcctcttccccctttcgtttggcgccttcaacctggtctactgg
atcgtctatctcaccaaggacacgatggagatgtccagggataccgtctaa
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