Siniperca chuatsi (mandarin fish): 122888098
Help
Entry
122888098 CDS
T08948
Name
(RefSeq) E3 ubiquitin-protein ligase TRAIP
KO
K11985
TRAF-interacting protein [EC:
2.3.2.27
]
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
schu04121
]
122888098
Enzymes [BR:
schu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122888098
Ubiquitin system [BR:
schu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122888098
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-C3HC4_3
zf-RING_UBOX
zf-RING_5
Lzipper-MIP1
zf-ANAPC11
zf-RING_11
zf-C3HC4_4
zf-RING_Vps41
WEMBL
HIP1_clath_bdg
CENP-F_leu_zip
zf-RING_16
zf-RING-like
Zn_ribbon_8
KxDL
COG3_N
zf_RING_Vps8
RING_XB3-XBAT31
Crescentin
RINGv
Sec3_CC
bZIP_1
Spectrin_Anc-1
FANCL_C
GAS
zf-Nse
AAA_13
Fez1
CALCOCO1
Fzo_mitofusin
SLX1_C
ADIP
DUF948
APG6_N
KASH_CCD
Motif
Other DBs
NCBI-GeneID:
122888098
NCBI-ProteinID:
XP_044078016
LinkDB
All DBs
Position
LG2:complement(26762235..26768028)
Genome browser
AA seq
449 aa
AA seq
DB search
MPIRAYCTICSDFFDHSRDVAAIHCGHTFHYECLLQWFQTAPTKTCPQCRKQVSTRHIIS
KLFFDIGGEEEGSADPESLQNELDRMKALLNSKERDWRDQQKMVASLKDTVDKQRRDLDS
VRKEIMEKEMLCSALRKQMTYLETQQNEAQAAKEEARRLRTRMKTFESLDVLLQGQRAEV
ESMITDMGISQAAVEQLSIYCISLKKEYDNLKGGLKSSNDMCEKLKREVLSSNNKLQKAS
MEVNQTKEDMKSLLNDLANADKEISSLKKKVEFLQRTLSTPTRTNEALSRLVFESPAPME
LKQPRLHHPADSEDIDLNMTYDITTPDDVAKRPTQVPSKKMRLDPPAPSVSKHNEKSSSL
SKARDEEGSMDPFLRNSLLFRKKTFGSMLDPQRKPGTVRSGYDGLGGRTKFIQPSPLSEI
RPLMKAKRKKVSRPPPKIATCLTLDSFLE
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgcctatccgagcatattgcacaatttgctccgatttcttcgatcactccagagatgtt
gctgccatccactgcggacatactttccactatgaatgccttctccagtggtttcagaca
gcccccacaaaaacctgtccacaatgtagaaaacaggtcagcaccagacacattatcagc
aagctgttctttgatattggtggagaggaggagggctcagctgacccggaaagcttgcag
aatgagcttgatagaatgaaggcgcttttaaactctaaagagcgagactggcgggaccaa
cagaagatggtggccagtttgaaggacactgtggacaagcagaggagagacctggacagt
gttcggaaagagattatggaaaaggagatgctctgttctgccctcagaaaacagatgaca
tatctggagacgcaacagaatgaagctcaggctgccaaggaggaggcccgtagactcagg
accagaatgaaaacctttgaaagcctggacgtgttgttgcagggccagagagcagaggtg
gagtccatgatcacagatatgggtatcagccaggcggcagtggagcagctctccatctac
tgcatctcgctcaaaaaggagtatgataatctaaaaggaggcctgaagtcttcaaatgac
atgtgtgagaagctgaagagagaagtgctctcctcaaacaacaagttacaaaaagcctca
atggaggtgaatcagacaaaagaggacatgaagtctctgctgaacgatctggccaatgct
gacaaagagatctctagtctgaagaagaaagtggagtttcttcagaggactctgagcacc
ccgacacggacaaatgaagctctcagtcggcttgtctttgaaagccccgccccaatggag
ctgaagcagcctcgcctccaccatcccgcagatagcgaggacattgacctcaacatgact
tatgacatcactacgccagatgatgtggccaagagaccgacgcaggtcccatccaagaag
atgcggcttgaccctccggcgccgtctgtgtccaagcacaatgagaaaagttcatctcta
agcaaggctcgagatgaggagggatccatggatccttttttgaggaactccctcctcttc
agaaagaagactttcggaagcatgttggaccctcagaggaagcctggcactgtgagaagt
ggttatgatggtttaggaggacgtactaaattcatccaaccttctcctttatcagagatc
cgcccactgatgaaagctaaaaggaaaaaggtatccaggcctccacccaagattgcaact
tgcctgactctggacagcttcctcgagtaa
DBGET
integrated database retrieval system
