Siniperca chuatsi (mandarin fish): 122888109
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Entry
122888109 CDS
T08948
Symbol
ncor1
Name
(RefSeq) nuclear receptor corepressor 1 isoform X1
KO
K04650
nuclear receptor co-repressor 1
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
122888109 (ncor1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
schu01009
]
122888109 (ncor1)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
schu03036
]
122888109 (ncor1)
Protein phosphatases and associated proteins [BR:
schu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
122888109 (ncor1)
Chromosome and associated proteins [BR:
schu03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
SMART complex
122888109 (ncor1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GPS2_interact
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
122888109
NCBI-ProteinID:
XP_044078043
LinkDB
All DBs
Position
LG14:7102641..7160225
Genome browser
AA seq
2421 aa
AA seq
DB search
MSSSSGYPPSQGSFSSEQSRYPPHSVQYTFTGTRHQQDFTVPDYRTHMQDPQGRRRPSLL
SEFHPGTERPPERRHGYEQQFHSITAQPEHEALEAKRPRMETVAEAHMTRTPPTAGGIVL
PLTHTVQDSLRATVEVKKESQFTVKVESPGGPTLHMGEEQDTSPSKLSKEELIQSMDRVD
REIAKVEQQIFKLKKKQQQLEEEAAKPVEPEKPVTPPPVEHKHRSIVQIIYDENRKKAEE
AHKILEGLGPKVELPLYNQPSDTKVYHDNIKTNQVMRKKLILFFKRRNHARKQREQKICQ
RYDQLMEAWEKKVERMENNPRRKAKESRTREYYERQFPEIRKQREQQERFQRVGQRGTGL
SATIARSEHEISEIIDGLSEQENNEKQMRQLSVIPPMMFDSEQRRVKFINMNGLMDDPMK
VYKARQFMNVWTEHEKEIFKEKFVQHPKNFSLIASYLERKCVADCVLYYYLTKKNHNYKT
LVRRNYGRRRGRNQQITRPSQEDKSDDKNEEDKSEKSEKKEEEEKKDEEEKDEKEDSRDI
GKDKDKCDGGEDEDGKEQNTPRGRKTANSQGRRKGRITTRSMANEAASVAAEEAPPPSTE
PALPDPPQLPKPDPAQKAMKEPAKPQTSIASMDATKAGETGETSRWTEEEMEVAKKGLVE
HGRNWTAIAKMVGTKSEAQCKNFYFNYKRRHNLDNLLQQHKQDTRRARADRSQGEGLATV
SPDDDDEDNPDDSEGGDNSSDTESAPSPSQADSSKSGDSKRTDSAAGDSQCSDQDKGQAS
NGKALEPSYGELCVKEEKSPESETGSQEEKARMAPYAGSVHPKTEPQDVDMKTGEVQVKM
EPEIKERGEKGDHCERQRELHSDNDSSATCSADEDVEAEPERQRIFSMEKPSLLSPPGSV
LVSSPKQTQLNIQQMQQRAAAIPPMVTGPFGPGGVPISGFAMLQHQIKAAHESAHQEEKQ
RQDQGDLERRPPFNTRSPTILDRDGKPLPYMPYDMKLALDQEAHSGRPGSPYRLSPRELS
KASPQPDPNAPNASRYSVPPVLHPAPNQLVPSMPDGVRMTFSRPSRPPNIPSPPPLIPTT
KPTDKPSFIQGGSISQGTPGTYLPSHAVYGPEGTKSTVGSISLGLPRQQDPNKPGAAVPS
IQDSRGNPAKVGEGLAFRGSITQGTPALPQSSIAADLLKGTITKLATEDLSSPDKTRQDQ
LAKGHVIYEGRIGHIVSYDAIKNPRENTRSPRAGHELKRTYDMMEGPMGRGHPGREGAPF
EGLISRALPRDGLHGDSKERPLITGSIMQGTPRTAAETYEDAMKYGKQIKRESPPIRSFE
GGIGKGKPYEGVNTIKEMGRSIHEIPRQDQSGQDICKTPDMSDRRGVEGSISQMHPLNQS
TIKHNVKSLITSPTKHPHSMPQLEAMERVKYEETKAVRHTVVNSTTSVLRSTHQEASKSQ
LSPGMYEDTNARRTPVNYSTNPGSRGSPMLGRTPEGGMSSAKSAAHERKSAMTPTQRDSV
PAKSPVSGGDPVASHSPFDPHHRPAVPGEVFQAHLSPHLDPTMAFHRVLDRAFMFPRQPS
PTGYHNTYQLYTMENTRQTILNDYITSQQMQVIPRPDMARGLSPREQPVAIPYAAGARGI
IDLAQMPPTILLPHPGGTGTPTLERIAYLPGAQPPFPHRAFNPTSISPGHQAHLAAAAAA
SAERERERERDREQQDKEREKEREREQREREREMRERERDRERTNEYIRGGGPEQPGRPG
SRGYLHSPSPSLRTQDVVVQQRPSIFQGKSVITSLMPHSAAATAAAQSSSRYNTAADALA
ALVDAAVSAPQMDVAKVKESKHERDDDMSSSAAARRAASLSEQQQQEAERRSMQSPYGGM
SLPGGKPHSAYSEGPGVGGKDKSPQTSKSRIEEELRTRGKTTITAANFIDVIITRQIASD
KDSRERGSQSSDSSSSLSSSRYDNTGGGAIEVISPASSPVQPQQDKPEEGQQQASDQLLR
SVPGQPSPAGMRAYDMSRYRPSGEQAQPSAQQPPSSQADSYSQVPKTHRVMTLADHISHI
ITQDFARNQDLPPVSSSASATFQSVVPPMSSSGRAKVPSRYSPENQVQAPHHQRPSSRVS
PENAPDKPRARPGKSPERGSRQMENYEPISPPQSYQGMDKQEAGGPPPQRREADTSEIRS
DSRSPGSVSYLPSFFTKLENTSPMVKSKKQEIFRKLNSTSGVGDSDVGNAQPGTEIFNLP
AVTSSSSINPRNHSFSDPASNLGLEDIIRKALMGNLEERQEEHQGGVGPQCAINNTPGTG
SDARQEANPSPSMGKQKQGKANSRKSKSPNLGQAYAGGERPSSVSSVHSEGDYHRQAQAQ
PQWSWDDRPSSTGSMQFPYNPLTMRILSSTPPTSIASPAIQSQQQQQQQQQAPTAGAPVG
QQRVWQSLLSEQYETLSDSDD
NT seq
7266 nt
NT seq
+upstream
nt +downstream
nt
atgtccagtagctcgggctacccccccagccaggggagcttcagcagtgagcagagcaga
tacccaccacattctgtccagtacaccttcaccggcacgcgccaccaacaggatttcacg
gtcccagactatcggactcacatgcaagatccacagggtcggagaagaccatctttactg
tctgaatttcaccctggaactgaaaggcctccagagagacgccatggttacgaacagcag
tttcactccatcacagcccagcctgagcatgaggccttggaggctaaacgccctcgcatg
gagactgttgctgaggcccacatgacccgcacccctcccactgctggcggtattgtcctg
cccttaacccatacagtacaggacagtctaagagccactgtggaggtcaaaaaggagtct
cagttcactgtcaaagtggagtccccaggaggacctacactacacatgggggaagagcag
gacacttctccttccaaactatccaaggaggagttgatccagagcatggaccgtgtggac
agagagattgctaaagtggagcagcagattttcaagctgaagaaaaagcagcaacaactg
gaggaggaagcagcaaagccagtggagccagaaaagccagtgacccctcccccagtggag
cacaagcaccgcagcatagtccagatcatctacgatgagaacaggaaaaaagctgaagag
gcccataaaatactggaaggtcttggtcctaaggttgagctgcccctgtacaatcagcca
tcagacacaaaggtgtaccatgacaacatcaagaccaaccaagtcatgaggaagaagctg
attttgttttttaagaggaggaaccacgctcgtaaacaaagggaacagaagatctgccag
cgctatgaccagctgatggaagcgtgggagaagaaggtggagcgaatggagaacaacccc
agacgtaaagccaaggagagcagaacacgggagtactatgaaaggcaattccctgagatc
cgcaagcagagagagcagcaggagcgcttccagagggttggacaaagaggaacgggtctt
tctgcaacaattgcaagaagcgagcatgagatttctgaaatcatagatggcctttctgag
caggagaacaacgagaaacagatgagacagctgtcagtcatccctcccatgatgttcgac
tctgagcagaggcgagtgaagtttatcaacatgaacggcctgatggatgacccaatgaag
gtgtacaaagcccggcagttcatgaatgtttggaccgaacacgaaaaagagatctttaag
gagaagtttgtccaacatcccaagaactttagcctgattgcctcctatctggagagaaag
tgtgttgctgactgtgtcctttactactacttgaccaagaagaaccacaactacaagaca
ctggtgagacgaaactatggaagacggagaggaaggaatcagcaaataacacgtccctca
caagaagacaagtcagacgacaaaaacgaagaggacaaatctgagaagtccgagaaaaaa
gaggaagaggaaaagaaggacgaggaagagaaagatgaaaaggaggattctagggacatt
ggcaaggacaaagacaagtgtgacggtggggaggacgaggacggaaaggagcaaaacacg
ccgcgtggcaggaagactgccaacagccagggccgccgtaagggaaggatcaccacacgc
tccatggccaatgaggctgcatctgtggcggctgaggaagcacctcccccttcgactgag
cctgccttgccagatcctccacaactccctaaacctgatccagcgcagaaggctatgaag
gagcctgcaaaaccccagacttcaatagcttccatggatgctactaaagctggtgaaacc
ggagaaacttctcgctggaccgaggaggagatggaggtcgctaaaaaagggctagttgag
catgggcgaaactggacagccattgccaaaatggtaggcaccaaaagtgaggcacagtgt
aagaacttctatttcaattacaagagacgtcacaacctggacaacctgctccagcagcat
aagcaggatacgcggcgggctcgtgctgataggtctcaaggtgaaggtctagccacagta
tcacctgatgacgatgatgaggacaaccctgatgacagtgaaggtggtgacaacagctct
gatacagaaagtgccccctctccctctcaggctgactcctcaaagtctggcgactccaag
aggacagacagcgctgcaggagattctcagtgctctgaccaggacaaaggtcaggccagc
aatggaaaggccctggagccctcatacggggaactctgtgtcaaggaagagaaaagccca
gagagtgagactggatctcaggaggaaaaggccaggatggccccctatgcaggctcagtg
catcccaaaactgaacctcaggatgtggacatgaagactggagaggttcaggtcaagatg
gagccagagatcaaggagagaggagaaaagggagatcattgtgagaggcagagggagctc
cactcagataatgactccagcgccacatgcagtgctgacgaggatgtggaagcagagcct
gaaagacagagaatattctccatggaaaagccttcattgctcagccctccaggctcggtg
ctggtgtcctcacccaaacaaacccaactcaacatccagcagatgcagcagcgggcagct
gccatcccacctatggtgactggtccttttggccccggtggtgtacccatcagtggattt
gcaatgttacaacaccaaatcaaagcagcgcatgagtctgcacaccaagaggagaagcag
aggcaggatcaaggagacctggagcgcagaccccccttcaacacccgcagccccaccata
ctagacagagatggtaagcccttaccctacatgccttatgacatgaagctggctctggac
caggaggcccactctggtcggccaggctctccctacagactctcccccagagagctgagc
aaggcctcaccccagcctgaccccaacgcccccaatgcctctcgctacagtgtgccacca
gtcctccaccctgcccccaaccagctggtcccgagtatgccagatggagtccgcatgacg
ttcagcagacccagtcgacctcccaacattccctctcctcctccactcattccaaccacc
aagcccacggacaagccctccttcatacaaggaggctccatctcccagggaactcctggc
acatacctgccatcccatgctgtctatgggccagaggggactaagagcactgtgggctcc
atctcgctaggtctgcctcggcaacaggatcctaacaagccgggagctgcagttccatcc
atacaggacagcagaggcaacccagcaaaagtgggcgagggtctggctttcagaggatca
atcactcagggcacaccagccctgccccagtctagcattgctgctgacctcctgaagggc
acaatcacaaagctggccacagaggacctgagcagcccagacaagaccagacaagaccag
ctggctaaaggtcatgtcatctatgaaggcaggattggtcacatagtctcctatgatgct
atcaagaaccccagagaaaacacccgcagccccagagcaggccatgagctgaaacgcact
tacgacatgatggaaggacccatgggcaggggacaccctggcagggaaggagccccattc
gaggggttgattagcagagccttgcccagagatggtctccatggagattctaaggaaaga
ccattgatcactggatccatcatgcaaggaacacctcgaaccgctgcagagacctatgaa
gatgccatgaaatatggaaaacagataaagcgagagagcccaccgatccgctcattcgaa
gggggtattggtaagggcaagccctacgagggagtcaatactatcaaagagatgggacgc
tccattcacgaaatcccccgacaagatcaatctggccaggacatctgcaagacccctgac
atgtcagacaggaggggtgtggagggctccatatctcagatgcaccctctcaaccagtct
actatcaagcacaatgtcaagtccctaatcaccagtcccactaagcatccccacagcatg
ccccagctcgaggccatggaacgagtcaaatatgaggagaccaaggcagtacgccacact
gtggtcaactccaccacctctgtcctgcgctccacacaccaggaggctagcaaatcccag
cttagcccgggcatgtatgaggacaccaacgctcgcaggacccctgttaactacagcacc
aatcccgggtcccgagggtcacccatgctgggacgtactccagagggtggtatgagctct
gcaaaatctgctgcgcatgaaagaaagagtgccatgactccgacacagagggacagtgtc
ccagctaagtccccagtgtcgggtggtgatcctgtagcctctcacagcccgtttgacccc
caccaccggcctgctgttcctggggaagtgttccaagcccacctgtctccacatctggac
cccacaatggccttccacagagtactggatcgtgccttcatgttccccaggcagccatcc
ccaacaggctaccacaacacctaccagctgtacaccatggagaacacgcggcagaccatc
ctcaacgattatatcacttcccagcagatgcaagtcatccctcgacctgacatggcccga
ggcttgtcaccacgggaacagcccgtcgctatcccttacgcagccggagctcgaggaatt
attgatctagcccagatgcctccaactatcctgttgcctcaccctgggggaacaggtact
cccactttggaacgcatcgcctacctccctggagctcagccccctttccctcatagggct
ttcaacccaacctccatatcgccaggccaccaagcccatcttgctgctgccgctgctgcc
agtgcagagagggaacgggagagggagcgtgaccgggagcagcaggacaaagagagagaa
aaggaaagagaacgggagcagagggaaagggagcgggaaatgcgagaacgagagcgggac
cgggagcgaaccaatgaatacatccgcggaggtggaccagagcagccagggcgaccaggg
agtcgaggttatctgcactccccttctccctctctcaggacgcaggatgtagtggttcag
cagcggcctagtatcttccagggcaagagtgtcatcacctctctaatgccccattcagca
gcagcgacagcagcagctcagagtagctctcgctacaatactgcagctgatgccctggct
gctctggtggacgctgcagtctctgccccgcagatggatgtggccaaggtgaaggagagc
aaacatgaacgggatgatgacatgtcctcgtcggctgcagctcggcgagcagctagcctc
tccgaacagcagcagcaggaggcagaaagacgatccatgcagtcaccatatggtggtatg
tctctgccagggggtaagccccattcagcttactctgagggccctggagtcgggggtaag
gataagagccctcaaacctcaaagtcccgcattgaagaggagcttcggactcgtggaaag
acaactataacagccgctaacttcattgatgtcatcatcacacggcagatagcctcggac
aaagactcacgagagcgaggctctcagagctctgactcctctagcagtttgtcatccagt
cgatatgacaacactggtggaggagccattgaggtgattagtcctgctagttccccagtc
caaccccaacaggacaaaccagaagaagggcaacaacaggcatctgatcagttgctacgc
tctgtccctggtcaaccttcaccagctggcatgcgggcctacgacatgagtcgttaccgg
ccgtcaggggagcaagcacagcccagtgcccagcagcccccctcctcccaggctgacagc
tactcccaggtccccaagactcaccgggttatgaccttggcagaccacatttcgcatatc
ataacccaggacttcgcccggaatcaggaccttcctccagtctcctcttcggcttcagcc
acattccagagtgtggtgccacccatgtcctcttcaggtcgagctaaggtgcccagtcgc
tacagtcctgagaatcaggtccaggccccacaccaccagagaccctccagcagagtttcc
ccagagaatgcccctgacaagcccagagccaggcctggtaaatctccagagcgaggcagc
aggcagatggagaactatgaacccatctctccaccacagagctaccaaggcatggacaaa
caggaggctggcgggcctccaccccagaggcgagaggctgacacctccgagatcaggagt
gactcacgatccccagggagtgtcagctatctgccttccttctttaccaagctggagaac
acctcgccaatggtgaaatccaagaagcaggaaatctttcgtaagttgaactccacctct
ggtgtcggtgattctgatgttggaaatgcgcaaccaggcacagagattttcaacttgcct
gctgtcaccagctccagcagcatcaaccccaggaatcactcttttagtgacccagccagt
aacctgggcctggaggacatcatccgcaaagcattgatgggcaacttggaggagagacag
gaagagcaccagggaggagtagggcctcagtgtgccatcaacaacacacccggcacaggc
agtgacgcccgccaggaggccaacccatcacccagtatgggcaagcagaagcagggcaaa
gccaacagccggaaatcaaagtcacctaacctgggtcaggcctacgctggaggggagcgt
ccctcttcagtatcctccgtccactccgagggagattatcacagacaagcccaagcccaa
ccccaatggagctgggacgaccgaccctcatccacaggatccatgcagttcccttacaac
ccgctgaccatgcgcatactgagcagcacgcctcccacctccatagcttcccccgccata
cagagccagcagcagcagcagcagcagcagcaggcacctacagctggagcccctgtaggc
cagcagcgtgtgtggcaatctctgctgtcagagcaatatgagaccctgtctgacagcgac
gactga
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integrated database retrieval system
